RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 LSM6P62312 80 aaKnown RBP7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 DEFA6Q01524 100 aa7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 RSPO1Q2MKA7 263 aaPredicted RBP7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 DEFB112Q30KQ8 113 aa7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 PRAMEF6Q5VXH4 476 aa7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 RUSC1-AS1Q66K80 236 aa7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 GPR139Q6DWJ6 353 aa7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 LRRN1Q6UXK5 716 aa7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 TREML4Q6UXN2 200 aa7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 FBXW12Q6X9E4 464 aa7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 CYP4Z1Q86W10 505 aa7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 OR6V1Q8N148 313 aa7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 FAM86B1Q8N7N1 296 aa7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 OR8B3Q8NGG8 313 aa7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 OR10S1Q8NGN2 331 aa7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 OR4K13Q8NH42 304 aa7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 RAB40AQ8WXH6 277 aa7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 ZDHHC16Q969W1 377 aa7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 APOBEC3DQ96AK3 386 aaPredicted RBP7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 UPRTQ96BW1 309 aa7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 NEIL1Q96FI4 390 aaPredicted RBP7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 COG8Q96MW5 612 aa7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 ERMAPQ96PL5 475 aaPredicted RBP7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 OR8B2Q96RD0 313 aa7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 NMNAT3Q96T66 252 aa7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 PITX2Q99697 317 aa7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 KCTD14Q9BQ13 255 aaPredicted RBP7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 SLC30A2Q9BRI3 323 aa7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 NUDT16L1Q9BRJ7 211 aaKnown RBP7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 CDADC1Q9BWV3 514 aa7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 NDEL1Q9GZM8 345 aa7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 FN3KQ9H479 309 aa7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 ZNF696Q9H7X3 374 aa7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 VIPAS39Q9H9C1 493 aa7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 TUBG2Q9NRH3 451 aa7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 TMEM100Q9NV29 134 aa7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 VSX1Q9NZR4 365 aaPredicted RBP7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 NDUFAF4Q9P032 175 aa7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 MIOXQ9UGB7 285 aa7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 TMCC3Q9ULS5 477 aa7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 AURKCQ9UQB9 309 aa7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 TMEM5Q9Y2B1 443 aa7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 FAM32AQ9Y421 112 aaKnown RBP7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 MEGF8Q7Z7M0 2845 aa7.19□□□□□ -1.26
CTDNEP1-203ENST00000570385 NOTCH1P46531 2555 aa7.18□□□□□ -1.26
CTDNEP1-203ENST00000570385 KIR2DS1A0A191URI9 304 aa7.18□□□□□ -1.26
CTDNEP1-203ENST00000570385 FAM181BA6NEQ2 426 aa7.18□□□□□ -1.26
CTDNEP1-203ENST00000570385 LRRC30A6NM36 301 aa7.18□□□□□ -1.26
CTDNEP1-203ENST00000570385 IQCF6A8MYZ5 107 aa7.18□□□□□ -1.26
CTDNEP1-203ENST00000570385 C22orf46C9J442 243 aa7.18□□□□□ -1.26
CTDNEP1-203ENST00000570385 PLATP00750 562 aa7.18□□□□□ -1.26
CTDNEP1-203ENST00000570385 LCATP04180 440 aa7.18□□□□□ -1.26
CTDNEP1-203ENST00000570385 IRF2P14316 349 aa7.18□□□□□ -1.26
CTDNEP1-203ENST00000570385 H2AFXP16104 143 aaPredicted RBP7.18□□□□□ -1.26
CTDNEP1-203ENST00000570385 PITPNBP48739 271 aa7.18□□□□□ -1.26
CTDNEP1-203ENST00000570385 RGS6P49758 472 aa7.18□□□□□ -1.26
CTDNEP1-203ENST00000570385 NUDT2P50583 147 aa7.18□□□□□ -1.26
CTDNEP1-203ENST00000570385 RPS6KA3P51812 740 aa7.18□□□□□ -1.26
CTDNEP1-203ENST00000570385 FGF12P61328 243 aa7.18□□□□□ -1.26
CTDNEP1-203ENST00000570385 IL13RA1P78552 427 aa7.18□□□□□ -1.26
CTDNEP1-203ENST00000570385 MAB21L1Q13394 359 aa7.18□□□□□ -1.26
CTDNEP1-203ENST00000570385 GK2Q14410 553 aaPredicted RBP7.18□□□□□ -1.26
CTDNEP1-203ENST00000570385 MPPED2Q15777 294 aa7.18□□□□□ -1.26
CTDNEP1-203ENST00000570385 ZNF404Q494X3 552 aa7.18□□□□□ -1.26
CTDNEP1-203ENST00000570385 WDR25Q64LD2 544 aaPredicted RBP7.18□□□□□ -1.26
CTDNEP1-203ENST00000570385 SFRP4Q6FHJ7 346 aaPredicted RBP7.18□□□□□ -1.26
CTDNEP1-203ENST00000570385 C16orf87Q6PH81 154 aa7.18□□□□□ -1.26
CTDNEP1-203ENST00000570385 SMARCD3Q6STE5 483 aa7.18□□□□□ -1.26
CTDNEP1-203ENST00000570385 DPY19L2P2Q6ZN68 376 aa7.18□□□□□ -1.26
CTDNEP1-203ENST00000570385 CFAP77Q6ZQR2 320 aa7.18□□□□□ -1.26
CTDNEP1-203ENST00000570385 ARPINQ7Z6K5 226 aa7.18□□□□□ -1.26
CTDNEP1-203ENST00000570385 ADCK1Q86TW2 530 aa7.18□□□□□ -1.26
CTDNEP1-203ENST00000570385 KIR3DL3Q8N743 410 aa7.18□□□□□ -1.26
CTDNEP1-203ENST00000570385 RNF148Q8N7C7 305 aa7.18□□□□□ -1.26
CTDNEP1-203ENST00000570385 FAM156AQ8NDB6 213 aa7.18□□□□□ -1.26
CTDNEP1-203ENST00000570385 GJC3Q8NFK1 279 aa7.18□□□□□ -1.26
CTDNEP1-203ENST00000570385 RP9Q8TA86 221 aaKnown RBP7.18□□□□□ -1.26
CTDNEP1-203ENST00000570385 SLCO4A1Q96BD0 722 aa7.18□□□□□ -1.26
CTDNEP1-203ENST00000570385 TMIGD2Q96BF3 282 aa7.18□□□□□ -1.26
CTDNEP1-203ENST00000570385 PLEKHA8Q96JA3 519 aa7.18□□□□□ -1.26
CTDNEP1-203ENST00000570385 COQ7Q99807 217 aa7.18□□□□□ -1.26
CTDNEP1-203ENST00000570385 PCGF1Q9BSM1 259 aa7.18□□□□□ -1.26
CTDNEP1-203ENST00000570385 HCAR1Q9BXC0 346 aa7.18□□□□□ -1.26
CTDNEP1-203ENST00000570385 NSRP1Q9H0G5 558 aaKnown RBP7.18□□□□□ -1.26
CTDNEP1-203ENST00000570385 RASSF4Q9H2L5 321 aa7.18□□□□□ -1.26
CTDNEP1-203ENST00000570385 MARCH7Q9H992 704 aa7.18□□□□□ -1.26
CTDNEP1-203ENST00000570385 RPRD1BQ9NQG5 326 aaKnown RBP7.18□□□□□ -1.26
CTDNEP1-203ENST00000570385 MRGBPQ9NV56 204 aa7.18□□□□□ -1.26
CTDNEP1-203ENST00000570385 CLN8Q9UBY8 286 aa7.18□□□□□ -1.26
CTDNEP1-203ENST00000570385 B9D1Q9UPM9 204 aa7.18□□□□□ -1.26
CTDNEP1-203ENST00000570385 TRRAPQ9Y4A5 3859 aa7.18□□□□□ -1.26
CTDNEP1-203ENST00000570385 IGLV1-36A0A0B4J1U3 117 aa7.17□□□□□ -1.26
CTDNEP1-203ENST00000570385 A0A1W2PRQ8 180 aa7.17□□□□□ -1.26
CTDNEP1-203ENST00000570385 C5orf63A6NC05 138 aa7.17□□□□□ -1.26
CTDNEP1-203ENST00000570385 C3orf80F5H4A9 247 aa7.17□□□□□ -1.26
CTDNEP1-203ENST00000570385 CLDN34H7C241 214 aa7.17□□□□□ -1.26
CTDNEP1-203ENST00000570385 IFNL4K9M1U5 179 aa7.17□□□□□ -1.26
CTDNEP1-203ENST00000570385 FAM20BO75063 409 aa7.17□□□□□ -1.26
CTDNEP1-203ENST00000570385 HLA-DQA2P01906 255 aa7.17□□□□□ -1.26
CTDNEP1-203ENST00000570385 SFTPBP07988 381 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms