RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 AVPP01185 164 aa7.54□□□□□ -1.2
NPLOC4-204ENST00000570324 IGHV2-70P01814 119 aa7.54□□□□□ -1.2
NPLOC4-204ENST00000570324 LCATP04180 440 aa7.54□□□□□ -1.2
NPLOC4-204ENST00000570324 HIST1H1CP16403 213 aaKnown RBP7.54□□□□□ -1.2
NPLOC4-204ENST00000570324 MDH2P40926 338 aaKnown RBP7.54□□□□□ -1.2
NPLOC4-204ENST00000570324 RAD23AP54725 363 aa7.54□□□□□ -1.2
NPLOC4-204ENST00000570324 TPTEP56180 551 aa7.54□□□□□ -1.2
NPLOC4-204ENST00000570324 FXYD6P3P58550 94 aa7.54□□□□□ -1.2
NPLOC4-204ENST00000570324 BTG1P62324 171 aa7.54□□□□□ -1.2
NPLOC4-204ENST00000570324 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.54□□□□□ -1.2
NPLOC4-204ENST00000570324 ECH1Q13011 328 aa7.54□□□□□ -1.2
NPLOC4-204ENST00000570324 HLXQ14774 488 aaPredicted RBP7.54□□□□□ -1.2
NPLOC4-204ENST00000570324 SPATS1Q496A3 300 aa7.54□□□□□ -1.2
NPLOC4-204ENST00000570324 TMEM155Q4W5P6 130 aa7.54□□□□□ -1.2
NPLOC4-204ENST00000570324 ARMCX4Q5H9R4 360 aa7.54□□□□□ -1.2
NPLOC4-204ENST00000570324 SLC35F1Q5T1Q4 408 aa7.54□□□□□ -1.2
NPLOC4-204ENST00000570324 RPL13AP3Q6NVV1 102 aa7.54□□□□□ -1.2
NPLOC4-204ENST00000570324 FBXW12Q6X9E4 464 aa7.54□□□□□ -1.2
NPLOC4-204ENST00000570324 Q6ZR03 302 aa7.54□□□□□ -1.2
NPLOC4-204ENST00000570324 LRRC28Q86X40 367 aaPredicted RBP7.54□□□□□ -1.2
NPLOC4-204ENST00000570324 LINC00346Q8IVM7 164 aa7.54□□□□□ -1.2
NPLOC4-204ENST00000570324 ZDHHC21Q8IVQ6 265 aa7.54□□□□□ -1.2
NPLOC4-204ENST00000570324 OR6V1Q8N148 313 aa7.54□□□□□ -1.2
NPLOC4-204ENST00000570324 LINC00471Q8N535 108 aa7.54□□□□□ -1.2
NPLOC4-204ENST00000570324 ZNF283Q8N7M2 679 aa7.54□□□□□ -1.2
NPLOC4-204ENST00000570324 BHLHE23Q8NDY6 225 aa7.54□□□□□ -1.2
NPLOC4-204ENST00000570324 SDR9C7Q8NEX9 313 aa7.54□□□□□ -1.2
NPLOC4-204ENST00000570324 OR10AD1Q8NGE0 317 aa7.54□□□□□ -1.2
NPLOC4-204ENST00000570324 OR52E2Q8NGJ4 325 aa7.54□□□□□ -1.2
NPLOC4-204ENST00000570324 DHRS1Q96LJ7 313 aa7.54□□□□□ -1.2
NPLOC4-204ENST00000570324 GPA33Q99795 319 aa7.54□□□□□ -1.2
NPLOC4-204ENST00000570324 MRI1Q9BV20 369 aa7.54□□□□□ -1.2
NPLOC4-204ENST00000570324 RBM4Q9BWF3 364 aaKnown RBP7.54□□□□□ -1.2
NPLOC4-204ENST00000570324 PATZ1Q9HBE1 687 aaKnown RBP7.54□□□□□ -1.2
NPLOC4-204ENST00000570324 IL1RAPQ9NPH3 570 aa7.54□□□□□ -1.2
NPLOC4-204ENST00000570324 TMEM100Q9NV29 134 aa7.54□□□□□ -1.2
NPLOC4-204ENST00000570324 OR5V1Q9UGF6 321 aa7.54□□□□□ -1.2
NPLOC4-204ENST00000570324 LHFPL6Q9Y693 200 aa7.54□□□□□ -1.2
NPLOC4-204ENST00000570324 TANC2Q9HCD6 1990 aa7.53□□□□□ -1.2
NPLOC4-204ENST00000570324 MXRA5Q9NR99 2828 aa7.53□□□□□ -1.2
NPLOC4-204ENST00000570324 PPIAL4EA0A075B759 164 aa7.53□□□□□ -1.2
NPLOC4-204ENST00000570324 IGLV1-36A0A0B4J1U3 117 aa7.53□□□□□ -1.2
NPLOC4-204ENST00000570324 PPIAL4CA0A0B4J2A2 164 aa7.53□□□□□ -1.2
NPLOC4-204ENST00000570324 PPIAL4DF5H284 164 aa7.53□□□□□ -1.2
NPLOC4-204ENST00000570324 TNFRSF11BO00300 401 aa7.53□□□□□ -1.2
NPLOC4-204ENST00000570324 DCTN6O00399 190 aa7.53□□□□□ -1.2
NPLOC4-204ENST00000570324 PPIAL4FP0DN26 164 aa7.53□□□□□ -1.2
NPLOC4-204ENST00000570324 SLC6A9P48067 706 aa7.53□□□□□ -1.2
NPLOC4-204ENST00000570324 ERFP50548 548 aa7.53□□□□□ -1.2
NPLOC4-204ENST00000570324 HILS1P60008 231 aa7.53□□□□□ -1.2
NPLOC4-204ENST00000570324 HIST1H3AP68431 136 aa7.53□□□□□ -1.2
NPLOC4-204ENST00000570324 COX10Q12887 443 aa7.53□□□□□ -1.2
NPLOC4-204ENST00000570324 TSPAN31Q12999 210 aa7.53□□□□□ -1.2
NPLOC4-204ENST00000570324 TAF13Q15543 124 aa7.53□□□□□ -1.2
NPLOC4-204ENST00000570324 CLEC12AQ5QGZ9 265 aa7.53□□□□□ -1.2
NPLOC4-204ENST00000570324 HIST2H3PS2Q5TEC6 136 aa7.53□□□□□ -1.2
NPLOC4-204ENST00000570324 CYP2R1Q6VVX0 501 aa7.53□□□□□ -1.2
NPLOC4-204ENST00000570324 C1orf229Q6ZS94 237 aaPredicted RBP7.53□□□□□ -1.2
NPLOC4-204ENST00000570324 USP43Q70EL4 1123 aa7.53□□□□□ -1.2
NPLOC4-204ENST00000570324 HIST2H3AQ71DI3 136 aa7.53□□□□□ -1.2
NPLOC4-204ENST00000570324 MRPL21Q7Z2W9 205 aaKnown RBP7.53□□□□□ -1.2
NPLOC4-204ENST00000570324 C1orf87Q8N0U7 546 aa7.53□□□□□ -1.2
NPLOC4-204ENST00000570324 C3orf56Q8N813 242 aa7.53□□□□□ -1.2
NPLOC4-204ENST00000570324 PROKR2Q8NFJ6 384 aa7.53□□□□□ -1.2
NPLOC4-204ENST00000570324 SLC26A10Q8NG04 563 aa7.53□□□□□ -1.2
NPLOC4-204ENST00000570324 OR11L1Q8NGX0 322 aa7.53□□□□□ -1.2
NPLOC4-204ENST00000570324 OR2T4Q8NH00 348 aa7.53□□□□□ -1.2
NPLOC4-204ENST00000570324 SPRYD4Q8WW59 207 aaPredicted RBP7.53□□□□□ -1.2
NPLOC4-204ENST00000570324 POP5Q969H6 163 aaKnown RBP7.53□□□□□ -1.2
NPLOC4-204ENST00000570324 SPTSSAQ969W0 71 aa7.53□□□□□ -1.2
NPLOC4-204ENST00000570324 PLEKHA8Q96JA3 519 aa7.53□□□□□ -1.2
NPLOC4-204ENST00000570324 SLC6A7Q99884 636 aa7.53□□□□□ -1.2
NPLOC4-204ENST00000570324 ATF6BQ99941 703 aa7.53□□□□□ -1.2
NPLOC4-204ENST00000570324 FUZQ9BT04 418 aa7.53□□□□□ -1.2
NPLOC4-204ENST00000570324 FN3KQ9H479 309 aa7.53□□□□□ -1.2
NPLOC4-204ENST00000570324 WDR76Q9H967 626 aa7.53□□□□□ -1.2
NPLOC4-204ENST00000570324 NTN4Q9HB63 628 aa7.53□□□□□ -1.2
NPLOC4-204ENST00000570324 GCM1Q9NP62 436 aa7.53□□□□□ -1.2
NPLOC4-204ENST00000570324 DDX28Q9NUL7 540 aaKnown RBP7.53□□□□□ -1.2
NPLOC4-204ENST00000570324 ARL8BQ9NVJ2 186 aa7.53□□□□□ -1.2
NPLOC4-204ENST00000570324 DCAF16Q9NXF7 216 aa7.53□□□□□ -1.2
NPLOC4-204ENST00000570324 KCNG2Q9UJ96 466 aa7.53□□□□□ -1.2
NPLOC4-204ENST00000570324 AUP1Q9Y679 476 aa7.53□□□□□ -1.2
NPLOC4-204ENST00000570324 IGHV3-64DA0A0J9YX35 117 aa7.52□□□□□ -1.21
NPLOC4-204ENST00000570324 OR6C68A6NDL8 312 aa7.52□□□□□ -1.21
NPLOC4-204ENST00000570324 IQCF6A8MYZ5 107 aa7.52□□□□□ -1.21
NPLOC4-204ENST00000570324 F5H5P2 479 aa7.52□□□□□ -1.21
NPLOC4-204ENST00000570324 H0YL77 283 aa7.52□□□□□ -1.21
NPLOC4-204ENST00000570324 TMEM178BH3BS89 294 aa7.52□□□□□ -1.21
NPLOC4-204ENST00000570324 CCNB2O95067 398 aa7.52□□□□□ -1.21
NPLOC4-204ENST00000570324 ZNF205O95201 554 aa7.52□□□□□ -1.21
NPLOC4-204ENST00000570324 CYB5R3P00387 301 aaPredicted RBP7.52□□□□□ -1.21
NPLOC4-204ENST00000570324 SEMG1P04279 462 aa7.52□□□□□ -1.21
NPLOC4-204ENST00000570324 RPS2P15880 293 aaKnown RBP7.52□□□□□ -1.21
NPLOC4-204ENST00000570324 ZFP36P26651 326 aaKnown RBP7.52□□□□□ -1.21
NPLOC4-204ENST00000570324 GGT2P36268 569 aa7.52□□□□□ -1.21
NPLOC4-204ENST00000570324 GSSP48637 474 aa7.52□□□□□ -1.21
NPLOC4-204ENST00000570324 MMP16P51512 607 aa7.52□□□□□ -1.21
NPLOC4-204ENST00000570324 GNB2P62879 340 aa7.52□□□□□ -1.21
NPLOC4-204ENST00000570324 TRAP1Q12931 704 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms