RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 ATF6BQ99941 703 aa14.41□□□□□ -0.1
MAP1LC3B-208ENST00000570189 SLC30A2Q9BRI3 323 aa14.41□□□□□ -0.1
MAP1LC3B-208ENST00000570189 METTL17Q9H7H0 456 aaPredicted RBP14.41□□□□□ -0.1
MAP1LC3B-208ENST00000570189 MRPL22Q9NWU5 206 aaKnown RBP14.41□□□□□ -0.1
MAP1LC3B-208ENST00000570189 PPP1R3CQ9UQK1 317 aa14.41□□□□□ -0.1
MAP1LC3B-208ENST00000570189 B2RBV5 119 aa14.4□□□□□ -0.1
MAP1LC3B-208ENST00000570189 F5H0A9 414 aaPredicted RBP14.4□□□□□ -0.1
MAP1LC3B-208ENST00000570189 TNFRSF11BO00300 401 aa14.4□□□□□ -0.1
MAP1LC3B-208ENST00000570189 AVPP01185 164 aa14.4□□□□□ -0.1
MAP1LC3B-208ENST00000570189 FSHBP01225 129 aa14.4□□□□□ -0.1
MAP1LC3B-208ENST00000570189 ACSM4P0C7M7 580 aa14.4□□□□□ -0.1
MAP1LC3B-208ENST00000570189 SELEP16581 610 aa14.4□□□□□ -0.1
MAP1LC3B-208ENST00000570189 CALB2P22676 271 aa14.4□□□□□ -0.1
MAP1LC3B-208ENST00000570189 OTX1P32242 354 aaPredicted RBP14.4□□□□□ -0.1
MAP1LC3B-208ENST00000570189 ERFP50548 548 aa14.4□□□□□ -0.1
MAP1LC3B-208ENST00000570189 BTG1P62324 171 aa14.4□□□□□ -0.1
MAP1LC3B-208ENST00000570189 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.4□□□□□ -0.1
MAP1LC3B-208ENST00000570189 TRIM25Q14258 630 aaKnown RBP14.4□□□□□ -0.1
MAP1LC3B-208ENST00000570189 PCK2Q16822 640 aa14.4□□□□□ -0.1
MAP1LC3B-208ENST00000570189 DCAF12L2Q5VW00 463 aa14.4□□□□□ -0.1
MAP1LC3B-208ENST00000570189 FAHD2BQ6P2I3 314 aaPredicted RBP14.4□□□□□ -0.1
MAP1LC3B-208ENST00000570189 SHQ1Q6PI26 577 aaKnown RBP14.4□□□□□ -0.1
MAP1LC3B-208ENST00000570189 CORO6Q6QEF8 472 aa14.4□□□□□ -0.1
MAP1LC3B-208ENST00000570189 CFAP77Q6ZQR2 320 aa14.4□□□□□ -0.1
MAP1LC3B-208ENST00000570189 LNX2Q8N448 690 aa14.4□□□□□ -0.1
MAP1LC3B-208ENST00000570189 SDR9C7Q8NEX9 313 aa14.4□□□□□ -0.1
MAP1LC3B-208ENST00000570189 ITLN1Q8WWA0 313 aa14.4□□□□□ -0.1
MAP1LC3B-208ENST00000570189 FAHD2AQ96GK7 314 aa14.4□□□□□ -0.1
MAP1LC3B-208ENST00000570189 ZNF582Q96NG8 517 aaPredicted RBP14.4□□□□□ -0.1
MAP1LC3B-208ENST00000570189 DGCR6LQ9BY27 220 aa14.4□□□□□ -0.1
MAP1LC3B-208ENST00000570189 PATZ1Q9HBE1 687 aaKnown RBP14.4□□□□□ -0.1
MAP1LC3B-208ENST00000570189 GCM1Q9NP62 436 aa14.4□□□□□ -0.1
MAP1LC3B-208ENST00000570189 DDX28Q9NUL7 540 aaKnown RBP14.4□□□□□ -0.1
MAP1LC3B-208ENST00000570189 BAIAP2Q9UQB8 552 aa14.4□□□□□ -0.1
MAP1LC3B-208ENST00000570189 FOXH1O75593 365 aa14.39□□□□□ -0.11
MAP1LC3B-208ENST00000570189 FAM107AO95990 144 aa14.39□□□□□ -0.11
MAP1LC3B-208ENST00000570189 GATA4P43694 442 aa14.39□□□□□ -0.11
MAP1LC3B-208ENST00000570189 CENPAP49450 140 aa14.39□□□□□ -0.11
MAP1LC3B-208ENST00000570189 MMP16P51512 607 aa14.39□□□□□ -0.11
MAP1LC3B-208ENST00000570189 HLXQ14774 488 aaPredicted RBP14.39□□□□□ -0.11
MAP1LC3B-208ENST00000570189 TUSC1Q2TAM9 212 aa14.39□□□□□ -0.11
MAP1LC3B-208ENST00000570189 CYP2R1Q6VVX0 501 aa14.39□□□□□ -0.11
MAP1LC3B-208ENST00000570189 DHFR2Q86XF0 187 aa14.39□□□□□ -0.11
MAP1LC3B-208ENST00000570189 MUC20Q8N307 709 aaPredicted RBP14.39□□□□□ -0.11
MAP1LC3B-208ENST00000570189 CELF2-AS1Q8N7Q2 184 aa14.39□□□□□ -0.11
MAP1LC3B-208ENST00000570189 OR9Q2Q8NGE9 314 aa14.39□□□□□ -0.11
MAP1LC3B-208ENST00000570189 OR52E2Q8NGJ4 325 aa14.39□□□□□ -0.11
MAP1LC3B-208ENST00000570189 OR2AJ1Q8NGZ0 328 aa14.39□□□□□ -0.11
MAP1LC3B-208ENST00000570189 OR2T4Q8NH00 348 aa14.39□□□□□ -0.11
MAP1LC3B-208ENST00000570189 ST7LQ8TDW4 575 aa14.39□□□□□ -0.11
MAP1LC3B-208ENST00000570189 C1orf21Q9H246 121 aa14.39□□□□□ -0.11
MAP1LC3B-208ENST00000570189 EGLN3Q9H6Z9 239 aa14.39□□□□□ -0.11
MAP1LC3B-208ENST00000570189 DCAF16Q9NXF7 216 aa14.39□□□□□ -0.11
MAP1LC3B-208ENST00000570189 PTTG3PQ9NZH4 202 aa14.39□□□□□ -0.11
MAP1LC3B-208ENST00000570189 PRPF19Q9UMS4 504 aaKnown RBP14.39□□□□□ -0.11
MAP1LC3B-208ENST00000570189 ISPDA4D126 451 aa14.38□□□□□ -0.11
MAP1LC3B-208ENST00000570189 TMEM178BH3BS89 294 aa14.38□□□□□ -0.11
MAP1LC3B-208ENST00000570189 CCNB2O95067 398 aa14.38□□□□□ -0.11
MAP1LC3B-208ENST00000570189 GASTP01350 101 aa14.38□□□□□ -0.11
MAP1LC3B-208ENST00000570189 MDH2P40926 338 aaKnown RBP14.38□□□□□ -0.11
MAP1LC3B-208ENST00000570189 SRP9P49458 86 aaKnown RBP14.38□□□□□ -0.11
MAP1LC3B-208ENST00000570189 SRSF2Q01130 221 aaKnown RBP14.38□□□□□ -0.11
MAP1LC3B-208ENST00000570189 TRAP1Q12931 704 aaKnown RBP14.38□□□□□ -0.11
MAP1LC3B-208ENST00000570189 ZMYND11Q15326 602 aa14.38□□□□□ -0.11
MAP1LC3B-208ENST00000570189 OR2T2Q6IF00 324 aa14.38□□□□□ -0.11
MAP1LC3B-208ENST00000570189 CD300LDQ6UXZ3 194 aa14.38□□□□□ -0.11
MAP1LC3B-208ENST00000570189 KLHL36Q8N4N3 616 aa14.38□□□□□ -0.11
MAP1LC3B-208ENST00000570189 OR8D4Q8NGM9 314 aa14.38□□□□□ -0.11
MAP1LC3B-208ENST00000570189 ZNF418Q8TF45 676 aaPredicted RBP14.38□□□□□ -0.11
MAP1LC3B-208ENST00000570189 ASB9Q96DX5 294 aa14.38□□□□□ -0.11
MAP1LC3B-208ENST00000570189 MAP6Q96JE9 813 aa14.38□□□□□ -0.11
MAP1LC3B-208ENST00000570189 MEGF10Q96KG7 1140 aa14.38□□□□□ -0.11
MAP1LC3B-208ENST00000570189 PITX2Q99697 317 aa14.38□□□□□ -0.11
MAP1LC3B-208ENST00000570189 RBM4Q9BWF3 364 aaKnown RBP14.38□□□□□ -0.11
MAP1LC3B-208ENST00000570189 CDADC1Q9BWV3 514 aa14.38□□□□□ -0.11
MAP1LC3B-208ENST00000570189 HCAR1Q9BXC0 346 aa14.38□□□□□ -0.11
MAP1LC3B-208ENST00000570189 PLA2G12AQ9BZM1 189 aa14.38□□□□□ -0.11
MAP1LC3B-208ENST00000570189 NMNAT2Q9BZQ4 307 aa14.38□□□□□ -0.11
MAP1LC3B-208ENST00000570189 LOC105371242A0A075B767 164 aa14.37□□□□□ -0.11
MAP1LC3B-208ENST00000570189 ARRDC5A6NEK1 342 aa14.37□□□□□ -0.11
MAP1LC3B-208ENST00000570189 MLNRO43193 412 aa14.37□□□□□ -0.11
MAP1LC3B-208ENST00000570189 T-ENOLP0DO92 83 aa14.37□□□□□ -0.11
MAP1LC3B-208ENST00000570189 HOXB6P17509 224 aaKnown RBP14.37□□□□□ -0.11
MAP1LC3B-208ENST00000570189 EPHA1P21709 976 aa14.37□□□□□ -0.11
MAP1LC3B-208ENST00000570189 SLC6A9P48067 706 aa14.37□□□□□ -0.11
MAP1LC3B-208ENST00000570189 SLC25A1P53007 311 aa14.37□□□□□ -0.11
MAP1LC3B-208ENST00000570189 HILS1P60008 231 aa14.37□□□□□ -0.11
MAP1LC3B-208ENST00000570189 GK2Q14410 553 aaPredicted RBP14.37□□□□□ -0.11
MAP1LC3B-208ENST00000570189 MICAQ29983 383 aa14.37□□□□□ -0.11
MAP1LC3B-208ENST00000570189 TEX30Q5JUR7 227 aa14.37□□□□□ -0.11
MAP1LC3B-208ENST00000570189 CLEC12AQ5QGZ9 265 aa14.37□□□□□ -0.11
MAP1LC3B-208ENST00000570189 SLC35F1Q5T1Q4 408 aa14.37□□□□□ -0.11
MAP1LC3B-208ENST00000570189 OR2T5Q6IEZ7 315 aa14.37□□□□□ -0.11
MAP1LC3B-208ENST00000570189 LINC00346Q8IVM7 164 aa14.37□□□□□ -0.11
MAP1LC3B-208ENST00000570189 OR10S1Q8NGN2 331 aa14.37□□□□□ -0.11
MAP1LC3B-208ENST00000570189 OR2T29Q8NH02 315 aa14.37□□□□□ -0.11
MAP1LC3B-208ENST00000570189 NANPQ8TBE9 248 aa14.37□□□□□ -0.11
MAP1LC3B-208ENST00000570189 ERGIC1Q969X5 290 aa14.37□□□□□ -0.11
MAP1LC3B-208ENST00000570189 FN3KQ9H479 309 aa14.37□□□□□ -0.11
MAP1LC3B-208ENST00000570189 OPN4Q9UHM6 478 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms