RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 LRRC23Q53EV4 343 aaPredicted RBP12.3□□□□□ -0.44
USB1-214ENST00000568848 CLEC12AQ5QGZ9 265 aa12.3□□□□□ -0.44
USB1-214ENST00000568848 ARL9Q6T311 187 aa12.3□□□□□ -0.44
USB1-214ENST00000568848 ZNF620Q6ZNG0 422 aa12.3□□□□□ -0.44
USB1-214ENST00000568848 CCDC80Q76M96 950 aa12.3□□□□□ -0.44
USB1-214ENST00000568848 NAA40Q86UY6 237 aa12.3□□□□□ -0.44
USB1-214ENST00000568848 C11orf44Q8N8P7 122 aa12.3□□□□□ -0.44
USB1-214ENST00000568848 OR8G5Q8NG78 346 aa12.3□□□□□ -0.44
USB1-214ENST00000568848 OR1F12Q8NHA8 337 aa12.3□□□□□ -0.44
USB1-214ENST00000568848 PTP4A1Q93096 173 aa12.3□□□□□ -0.44
USB1-214ENST00000568848 TPD52L3Q96J77 140 aa12.3□□□□□ -0.44
USB1-214ENST00000568848 STX18Q9P2W9 335 aaKnown RBP12.3□□□□□ -0.44
USB1-214ENST00000568848 COA3Q9Y2R0 106 aaPredicted RBP12.3□□□□□ -0.44
USB1-214ENST00000568848 TEX13CA0A0J9YWL9 993 aa12.29□□□□□ -0.44
USB1-214ENST00000568848 A0A1B0GUS0 222 aa12.29□□□□□ -0.44
USB1-214ENST00000568848 C5orf63A6NC05 138 aa12.29□□□□□ -0.44
USB1-214ENST00000568848 NPIPB13A6NJU9 1138 aa12.29□□□□□ -0.44
USB1-214ENST00000568848 NPIPB4C9JG80 1138 aa12.29□□□□□ -0.44
USB1-214ENST00000568848 TNFRSF13BO14836 293 aaPredicted RBP12.29□□□□□ -0.44
USB1-214ENST00000568848 SURF4O15260 269 aa12.29□□□□□ -0.44
USB1-214ENST00000568848 TOX4O94842 621 aa12.29□□□□□ -0.44
USB1-214ENST00000568848 RAC2P15153 192 aa12.29□□□□□ -0.44
USB1-214ENST00000568848 MDH1P40925 334 aaKnown RBP12.29□□□□□ -0.44
USB1-214ENST00000568848 GUCA1AP43080 201 aaPredicted RBP12.29□□□□□ -0.44
USB1-214ENST00000568848 ZNF362Q5T0B9 420 aaPredicted RBP12.29□□□□□ -0.44
USB1-214ENST00000568848 PNKDQ8N490 385 aa12.29□□□□□ -0.44
USB1-214ENST00000568848 PIP4P2Q8N4L2 257 aa12.29□□□□□ -0.44
USB1-214ENST00000568848 PLEKHA8Q96JA3 519 aa12.29□□□□□ -0.44
USB1-214ENST00000568848 TSSK2Q96PF2 358 aa12.29□□□□□ -0.44
USB1-214ENST00000568848 SLC30A2Q9BRI3 323 aa12.29□□□□□ -0.44
USB1-214ENST00000568848 SYT4Q9H2B2 425 aa12.29□□□□□ -0.44
USB1-214ENST00000568848 TOR3AQ9H497 397 aa12.29□□□□□ -0.44
USB1-214ENST00000568848 CCDC134Q9H6E4 229 aa12.29□□□□□ -0.44
USB1-214ENST00000568848 SIGLEC9Q9Y336 463 aa12.29□□□□□ -0.44
USB1-214ENST00000568848 IGHV3OR15-7A0A075B7D8 119 aa12.28□□□□□ -0.44
USB1-214ENST00000568848 EFCAB9A8MZ26 197 aa12.28□□□□□ -0.44
USB1-214ENST00000568848 FFAR1O14842 300 aa12.28□□□□□ -0.44
USB1-214ENST00000568848 ENSAO43768 121 aaKnown RBP12.28□□□□□ -0.44
USB1-214ENST00000568848 SLC16A7O60669 478 aa12.28□□□□□ -0.44
USB1-214ENST00000568848 COX5BP10606 129 aa12.28□□□□□ -0.44
USB1-214ENST00000568848 RPL4P36578 427 aaKnown RBP12.28□□□□□ -0.44
USB1-214ENST00000568848 SRP9P49458 86 aaKnown RBP12.28□□□□□ -0.44
USB1-214ENST00000568848 ARF6P62330 175 aa12.28□□□□□ -0.44
USB1-214ENST00000568848 RSPO1Q2MKA7 263 aaPredicted RBP12.28□□□□□ -0.44
USB1-214ENST00000568848 CYBRD1Q53TN4 286 aa12.28□□□□□ -0.44
USB1-214ENST00000568848 INTS11Q5TA45 600 aaKnown RBP12.28□□□□□ -0.44
USB1-214ENST00000568848 Q6ZPA2 131 aa12.28□□□□□ -0.44
USB1-214ENST00000568848 NLRC3Q7RTR2 1065 aa12.28□□□□□ -0.44
USB1-214ENST00000568848 VTCN1Q7Z7D3 282 aa12.28□□□□□ -0.44
USB1-214ENST00000568848 CALHM3Q86XJ0 350 aa12.28□□□□□ -0.44
USB1-214ENST00000568848 OR13G1Q8NGZ3 307 aa12.28□□□□□ -0.44
USB1-214ENST00000568848 ITPKCQ96DU7 683 aa12.28□□□□□ -0.44
USB1-214ENST00000568848 ZNF582Q96NG8 517 aaPredicted RBP12.28□□□□□ -0.44
USB1-214ENST00000568848 WDFY2Q96P53 400 aa12.28□□□□□ -0.44
USB1-214ENST00000568848 ECSITQ9BQ95 431 aa12.28□□□□□ -0.44
USB1-214ENST00000568848 NOX4Q9NPH5 578 aa12.28□□□□□ -0.44
USB1-214ENST00000568848 MED4Q9NPJ6 270 aa12.28□□□□□ -0.44
USB1-214ENST00000568848 TET2Q6N021 2002 aaPredicted RBP12.27□□□□□ -0.44
USB1-214ENST00000568848 IGHV1-69DA0A0B4J2H0 117 aa12.27□□□□□ -0.45
USB1-214ENST00000568848 GMNCA6NCL1 334 aa12.27□□□□□ -0.45
USB1-214ENST00000568848 ZNF879B4DU55 563 aa12.27□□□□□ -0.45
USB1-214ENST00000568848 DCTN6O00399 190 aa12.27□□□□□ -0.45
USB1-214ENST00000568848 SOCS2O14508 198 aa12.27□□□□□ -0.45
USB1-214ENST00000568848 PLXNB1O43157 2135 aa12.27□□□□□ -0.45
USB1-214ENST00000568848 OR10H3O60404 316 aa12.27□□□□□ -0.45
USB1-214ENST00000568848 CLPXO76031 633 aa12.27□□□□□ -0.45
USB1-214ENST00000568848 IGHV1-69P01742 117 aa12.27□□□□□ -0.45
USB1-214ENST00000568848 GYPAP02724 150 aa12.27□□□□□ -0.45
USB1-214ENST00000568848 FPR3P25089 353 aa12.27□□□□□ -0.45
USB1-214ENST00000568848 PSMB10P40306 273 aa12.27□□□□□ -0.45
USB1-214ENST00000568848 CENPAP49450 140 aa12.27□□□□□ -0.45
USB1-214ENST00000568848 EGR3Q06889 387 aa12.27□□□□□ -0.45
USB1-214ENST00000568848 AQP6Q13520 282 aa12.27□□□□□ -0.45
USB1-214ENST00000568848 MAPRE2Q15555 327 aa12.27□□□□□ -0.45
USB1-214ENST00000568848 BEAN1Q3B7T3 259 aa12.27□□□□□ -0.45
USB1-214ENST00000568848 FBXW12Q6X9E4 464 aa12.27□□□□□ -0.45
USB1-214ENST00000568848 DCDC5Q6ZRR9 648 aa12.27□□□□□ -0.45
USB1-214ENST00000568848 ZNF826PQ6ZT77 177 aa12.27□□□□□ -0.45
USB1-214ENST00000568848 PTCHD4Q6ZW05 846 aa12.27□□□□□ -0.45
USB1-214ENST00000568848 SYT9Q86SS6 491 aa12.27□□□□□ -0.45
USB1-214ENST00000568848 OAFQ86UD1 273 aa12.27□□□□□ -0.45
USB1-214ENST00000568848 LINC00346Q8IVM7 164 aa12.27□□□□□ -0.45
USB1-214ENST00000568848 LYG1Q8N1E2 194 aa12.27□□□□□ -0.45
USB1-214ENST00000568848 OR8J3Q8NGG0 315 aa12.27□□□□□ -0.45
USB1-214ENST00000568848 ZNF583Q96ND8 569 aa12.27□□□□□ -0.45
USB1-214ENST00000568848 SIRPDQ9H106 197 aa12.27□□□□□ -0.45
USB1-214ENST00000568848 ACOXLQ9NUZ1 547 aa12.27□□□□□ -0.45
USB1-214ENST00000568848 ADA2Q9NZK5 511 aa12.27□□□□□ -0.45
USB1-214ENST00000568848 RPS6KA6Q9UK32 745 aa12.27□□□□□ -0.45
USB1-214ENST00000568848 CAPN7Q9Y6W3 813 aa12.27□□□□□ -0.45
USB1-214ENST00000568848 PRSS37A4D1T9 235 aa12.26□□□□□ -0.45
USB1-214ENST00000568848 A6NIZ1 184 aa12.26□□□□□ -0.45
USB1-214ENST00000568848 BBIP1A8MTZ0 92 aa12.26□□□□□ -0.45
USB1-214ENST00000568848 IQCF6A8MYZ5 107 aa12.26□□□□□ -0.45
USB1-214ENST00000568848 PHYHO14832 338 aa12.26□□□□□ -0.45
USB1-214ENST00000568848 ADAM20O43506 726 aa12.26□□□□□ -0.45
USB1-214ENST00000568848 ALX3O95076 343 aa12.26□□□□□ -0.45
USB1-214ENST00000568848 TFF1P04155 84 aa12.26□□□□□ -0.45
USB1-214ENST00000568848 IER3P46695 156 aa12.26□□□□□ -0.45
USB1-214ENST00000568848 RAD23AP54725 363 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms