RNA–Protein interactions for RNA: ENST00000568310.1

DNAAF4-CCPG1-202, Transcript of DNAAF4-CCPG1 readthrough (NMD candidate), humanhuman

TSL 2

Gene DNAAF4-CCPG1, Length 1,293 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF4-CCPG1-202ENST00000568310 FFAR4Q5NUL3 377 aa5.87□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 MRPL2Q5T653 305 aaKnown RBP5.87□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 TSPO2Q5TGU0 170 aa5.87□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 AP1ARQ63HQ0 302 aa5.87□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 C11orf71Q6IPW1 123 aa5.87□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 LRRC74BQ6ZQY2 392 aa5.87□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 VRK2Q86Y07 508 aa5.87□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 TMEM99Q8N816 258 aa5.87□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 PCYOX1LQ8NBM8 494 aa5.87□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 DDIT4LQ96D03 193 aa5.87□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 RADILQ96JH8 1075 aa5.87□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 MUS81Q96NY9 551 aa5.87□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 TRNT1Q96Q11 434 aaKnown RBP5.87□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 OR52E6Q96RD3 313 aa5.87□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 DHRS9Q9BPW9 319 aa5.87□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 NAA11Q9BSU3 229 aaPredicted RBP5.87□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 PARD6BQ9BYG5 372 aa5.87□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 WDR55Q9H6Y2 383 aaPredicted RBP5.87□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 MTHFD2LQ9H903 347 aaPredicted RBP5.87□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 MEAF6Q9HAF1 191 aa5.87□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 EXOSC3Q9NQT5 275 aaKnown RBP5.87□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 CBLN4Q9NTU7 201 aa5.87□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 AIG1Q9NVV5 245 aa5.87□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 BTNL2Q9UIR0 455 aa5.87□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 MGAT4BQ9UQ53 548 aa5.87□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 TRAPPC4Q9Y296 219 aa5.87□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 FLVCR1Q9Y5Y0 555 aa5.87□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 CR1P17927 2039 aa5.87□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 CSPG4Q6UVK1 2322 aa5.87□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 ZNF469Q96JG9 3925 aaPredicted RBP5.86□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 ZFHX3Q15911 3703 aa5.86□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 HIVEP2P31629 2446 aa5.86□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 CADP27708 2225 aa5.86□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 CHD3Q12873 2000 aaKnown RBP5.86□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 CFAP73A6NFT4 308 aa5.86□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 PDLIM1O00151 329 aa5.86□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 KLF11O14901 512 aa5.86□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 ZNF208O43345 1280 aa5.86□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 TLX2O43763 284 aaPredicted RBP5.86□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 EIF1BO60739 113 aaKnown RBP5.86□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 LY6HO94772 140 aa5.86□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 DBIP07108 87 aaKnown RBP5.86□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 TMEM11P17152 192 aa5.86□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 RPS4Y1P22090 263 aaKnown RBP5.86□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 FKBP2P26885 142 aaKnown RBP5.86□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 SLC1A3P43003 542 aa5.86□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 LGALS3BPQ08380 585 aa5.86□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 EPS8Q12929 822 aa5.86□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 BNIP2Q12982 314 aa5.86□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 GNA13Q14344 377 aa5.86□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 SLC17A1Q14916 467 aa5.86□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 RAB35Q15286 201 aa5.86□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 OR7A5Q15622 319 aa5.86□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 MAPK11Q15759 364 aa5.86□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 GTDC1Q4AE62 458 aa5.86□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 LCE3CQ5T5A8 94 aa5.86□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 HHATQ5VTY9 493 aa5.86□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 PAQR6Q6TCH4 344 aa5.86□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 ZNF836Q6ZNA1 936 aa5.86□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 SSX8Q7RTT4 187 aa5.86□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 AAED1Q7RTV5 226 aa5.86□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 SPATA19Q7Z5L4 167 aa5.86□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 HIPK1Q86Z02 1210 aa5.86□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 PEX5LQ8IYB4 626 aa5.86□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 MUC15Q8N387 334 aa5.86□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 CADM2Q8N3J6 435 aa5.86□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 MREGQ8N565 214 aa5.86□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 ZNF525Q8N782 197 aa5.86□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 TRIML2Q8N7C3 387 aa5.86□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 ZIC4Q8N9L1 334 aa5.86□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 OR52P1PQ8NH57 321 aa5.86□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 MGARPQ8TDB4 240 aa5.86□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 AURKBQ96GD4 344 aaPredicted RBP5.86□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 ZBTB18Q99592 522 aa5.86□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 SLC17A5Q9NRA2 495 aa5.86□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 MOKQ9UQ07 419 aa5.86□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 SLC9A8Q9Y2E8 581 aa5.86□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 A0A096LNT2 108 aa5.85□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 LIPT2A6NK58 231 aa5.85□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 RNF212BA8MTL3 300 aa5.85□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 KRTAP16-1A8MUX0 517 aa5.85□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 A8MV72 311 aaPredicted RBP5.85□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 ATP6V1G2-DDX39BF2Z307 99 aa5.85□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 RFXANKO14593 260 aa5.85□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 HDAC3O15379 428 aa5.85□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 KRT33AO76009 404 aa5.85□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 ANP32DO95626 131 aa5.85□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 KRT75O95678 551 aa5.85□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 BCHEP06276 602 aa5.85□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 GPIP06744 558 aa5.85□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 PRG2P13727 222 aa5.85□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 CXCR1P25024 350 aa5.85□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 ACAA2P42765 397 aaKnown RBP5.85□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 CRATP43155 626 aa5.85□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 PRPS1P60891 318 aa5.85□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 TGFBR3Q03167 851 aa5.85□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 PCGF3Q3KNV8 242 aa5.85□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 CHRFAM7AQ494W8 412 aa5.85□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 HIKESHIQ53FT3 197 aa5.85□□□□□ -1.47
DNAAF4-CCPG1-202ENST00000568310 TNFAIP8L3Q5GJ75 292 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms