RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 THRSPQ92748 146 aa0.67□□□□□ -2.3
CDH1-211ENST00000567320 OTUB2Q96DC9 234 aa0.67□□□□□ -2.3
CDH1-211ENST00000567320 PKNOX2Q96KN3 472 aa0.67□□□□□ -2.3
CDH1-211ENST00000567320 MICU1Q9BPX6 476 aa0.67□□□□□ -2.3
CDH1-211ENST00000567320 RAB33BQ9H082 229 aa0.67□□□□□ -2.3
CDH1-211ENST00000567320 ANKRD19PQ9H560 264 aa0.67□□□□□ -2.3
CDH1-211ENST00000567320 CWH43Q9H720 699 aa0.67□□□□□ -2.3
CDH1-211ENST00000567320 TAS2R3Q9NYW6 316 aa0.67□□□□□ -2.3
CDH1-211ENST00000567320 IGKV1-8A0A0C4DH67 115 aa0.66□□□□□ -2.3
CDH1-211ENST00000567320 A0A1B0GUH1 482 aa0.66□□□□□ -2.3
CDH1-211ENST00000567320 A0A1B0GVL5 298 aa0.66□□□□□ -2.3
CDH1-211ENST00000567320 CDC7O00311 574 aa0.66□□□□□ -2.3
CDH1-211ENST00000567320 EEDO75530 441 aaKnown RBP0.66□□□□□ -2.3
CDH1-211ENST00000567320 CTSGP08311 255 aa0.66□□□□□ -2.3
CDH1-211ENST00000567320 DBTP11182 482 aaKnown RBP0.66□□□□□ -2.3
CDH1-211ENST00000567320 GGT1P19440 569 aa0.66□□□□□ -2.3
CDH1-211ENST00000567320 IFNA8P32881 189 aa0.66□□□□□ -2.3
CDH1-211ENST00000567320 CSNK1EP49674 416 aaKnown RBP0.66□□□□□ -2.3
CDH1-211ENST00000567320 HTD2P86397 168 aa0.66□□□□□ -2.3
CDH1-211ENST00000567320 SLC25A11Q02978 314 aaKnown RBP0.66□□□□□ -2.3
CDH1-211ENST00000567320 C2orf54Q08AI8 447 aa0.66□□□□□ -2.3
CDH1-211ENST00000567320 ZNF77Q15935 545 aa0.66□□□□□ -2.3
CDH1-211ENST00000567320 SLC25A35Q3KQZ1 300 aa0.66□□□□□ -2.3
CDH1-211ENST00000567320 HSP90AA5PQ58FG0 334 aa0.66□□□□□ -2.3
CDH1-211ENST00000567320 TTC19Q6DKK2 380 aaPredicted RBP0.66□□□□□ -2.3
CDH1-211ENST00000567320 Q6ZPB1 254 aaPredicted RBP0.66□□□□□ -2.3
CDH1-211ENST00000567320 SLC25A48Q6ZT89 311 aaKnown RBP0.66□□□□□ -2.3
CDH1-211ENST00000567320 SDR9C7Q8NEX9 313 aa0.66□□□□□ -2.3
CDH1-211ENST00000567320 SLC2A14Q8TDB8 520 aa0.66□□□□□ -2.3
CDH1-211ENST00000567320 C12orf42Q96LP6 360 aa0.66□□□□□ -2.3
CDH1-211ENST00000567320 TMEM27Q9HBJ8 222 aa0.66□□□□□ -2.3
CDH1-211ENST00000567320 ZNF302Q9NR11 478 aa0.66□□□□□ -2.3
CDH1-211ENST00000567320 FBXO8Q9NRD0 319 aa0.66□□□□□ -2.3
CDH1-211ENST00000567320 POLE3Q9NRF9 147 aa0.66□□□□□ -2.3
CDH1-211ENST00000567320 HMGXB4Q9UGU5 601 aa0.66□□□□□ -2.3
CDH1-211ENST00000567320 TSPOAP1O95153 1857 aa0.66□□□□□ -2.3
CDH1-211ENST00000567320 BAZ2AQ9UIF9 1905 aaKnown RBP0.66□□□□□ -2.3
CDH1-211ENST00000567320 GLYATL1P3A0A0U1RQE8 302 aa0.65□□□□□ -2.31
CDH1-211ENST00000567320 A0A1B0GWJ7 208 aa0.65□□□□□ -2.31
CDH1-211ENST00000567320 GOLGA6L4A6NEF3 574 aa0.65□□□□□ -2.31
CDH1-211ENST00000567320 DNALI1O14645 258 aaPredicted RBP0.65□□□□□ -2.31
CDH1-211ENST00000567320 NUPL2O15504 423 aaKnown RBP0.65□□□□□ -2.31
CDH1-211ENST00000567320 FSTL3O95633 263 aa0.65□□□□□ -2.31
CDH1-211ENST00000567320 CPSF4O95639 269 aaKnown RBP0.65□□□□□ -2.31
CDH1-211ENST00000567320 P0DMU3 169 aa0.65□□□□□ -2.31
CDH1-211ENST00000567320 FAM231AP0DMU4 169 aa0.65□□□□□ -2.31
CDH1-211ENST00000567320 FAM231CP0DMU5 169 aa0.65□□□□□ -2.31
CDH1-211ENST00000567320 SSR4P51571 173 aa0.65□□□□□ -2.31
CDH1-211ENST00000567320 KLF3P57682 345 aaPredicted RBP0.65□□□□□ -2.31
CDH1-211ENST00000567320 TAS2R43P59537 309 aa0.65□□□□□ -2.31
CDH1-211ENST00000567320 ILKQ13418 452 aa0.65□□□□□ -2.31
CDH1-211ENST00000567320 OR4F6Q8NGB9 312 aa0.65□□□□□ -2.31
CDH1-211ENST00000567320 OR1L6Q8NGR2 347 aa0.65□□□□□ -2.31
CDH1-211ENST00000567320 OR1L4Q8NGR5 311 aa0.65□□□□□ -2.31
CDH1-211ENST00000567320 ZNF502Q8TBZ5 544 aa0.65□□□□□ -2.31
CDH1-211ENST00000567320 TCEANC2Q96MN5 208 aa0.65□□□□□ -2.31
CDH1-211ENST00000567320 OR5B12Q96R08 314 aa0.65□□□□□ -2.31
CDH1-211ENST00000567320 NUDT9Q9BW91 350 aa0.65□□□□□ -2.31
CDH1-211ENST00000567320 TMEM9BQ9NQ34 198 aa0.65□□□□□ -2.31
CDH1-211ENST00000567320 TAS2R5Q9NYW4 299 aa0.65□□□□□ -2.31
CDH1-211ENST00000567320 RWDD2AQ9UIY3 292 aa0.65□□□□□ -2.31
CDH1-211ENST00000567320 PEX16Q9Y5Y5 336 aa0.65□□□□□ -2.31
CDH1-211ENST00000567320 RPRD2Q5VT52 1461 aaKnown RBP0.65□□□□□ -2.31
CDH1-211ENST00000567320 LTBP2Q14767 1821 aa0.64□□□□□ -2.31
CDH1-211ENST00000567320 SMIM26A0A096LP01 95 aa0.64□□□□□ -2.31
CDH1-211ENST00000567320 IGKV1D-43A0A0B4J1Z2 117 aa0.64□□□□□ -2.31
CDH1-211ENST00000567320 A0A1W2PPV9 198 aa0.64□□□□□ -2.31
CDH1-211ENST00000567320 BTBD17A6NE02 478 aa0.64□□□□□ -2.31
CDH1-211ENST00000567320 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP0.64□□□□□ -2.31
CDH1-211ENST00000567320 HAS3O00219 553 aa0.64□□□□□ -2.31
CDH1-211ENST00000567320 SCO1O75880 301 aa0.64□□□□□ -2.31
CDH1-211ENST00000567320 HSPD1P10809 573 aaKnown RBP0.64□□□□□ -2.31
CDH1-211ENST00000567320 PSMA5P28066 241 aa0.64□□□□□ -2.31
CDH1-211ENST00000567320 RPS23P62266 143 aaKnown RBP0.64□□□□□ -2.31
CDH1-211ENST00000567320 MRPS22P82650 360 aaKnown RBP0.64□□□□□ -2.31
CDH1-211ENST00000567320 FMODQ06828 376 aa0.64□□□□□ -2.31
CDH1-211ENST00000567320 DGCR6Q14129 220 aa0.64□□□□□ -2.31
CDH1-211ENST00000567320 NCF4Q15080 339 aa0.64□□□□□ -2.31
CDH1-211ENST00000567320 PAGE2Q7Z2X7 111 aa0.64□□□□□ -2.31
CDH1-211ENST00000567320 MDP1Q86V88 176 aa0.64□□□□□ -2.31
CDH1-211ENST00000567320 CHST4Q8NCG5 386 aa0.64□□□□□ -2.31
CDH1-211ENST00000567320 TRPV1Q8NER1 839 aa0.64□□□□□ -2.31
CDH1-211ENST00000567320 SLC26A10Q8NG04 563 aa0.64□□□□□ -2.31
CDH1-211ENST00000567320 OR1S2Q8NGQ3 325 aa0.64□□□□□ -2.31
CDH1-211ENST00000567320 OR2A1Q8NGT9 310 aa0.64□□□□□ -2.31
CDH1-211ENST00000567320 OR5B3Q8NH48 314 aa0.64□□□□□ -2.31
CDH1-211ENST00000567320 OR10G6Q8NH81 332 aa0.64□□□□□ -2.31
CDH1-211ENST00000567320 RLN3Q8WXF3 142 aa0.64□□□□□ -2.31
CDH1-211ENST00000567320 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP0.64□□□□□ -2.31
CDH1-211ENST00000567320 DTNBP1Q96EV8 351 aa0.64□□□□□ -2.31
CDH1-211ENST00000567320 COQ2Q96H96 371 aa0.64□□□□□ -2.31
CDH1-211ENST00000567320 MTFP1Q9UDX5 166 aa0.64□□□□□ -2.31
CDH1-211ENST00000567320 LSM7Q9UK45 103 aaKnown RBP0.64□□□□□ -2.31
CDH1-211ENST00000567320 GPRASP1Q5JY77 1395 aa0.64□□□□□ -2.31
CDH1-211ENST00000567320 LAMB2P55268 1798 aa0.63□□□□□ -2.31
CDH1-211ENST00000567320 AHNAK2Q8IVF2 5795 aa0.63□□□□□ -2.31
CDH1-211ENST00000567320 TRAV26-1A0A087WT03 109 aa0.63□□□□□ -2.31
CDH1-211ENST00000567320 IGHV1-69DA0A0B4J2H0 117 aa0.63□□□□□ -2.31
CDH1-211ENST00000567320 IGKV2-29A2NJV5 120 aaPredicted RBP0.63□□□□□ -2.31
CDH1-211ENST00000567320 TIMM8AO60220 97 aaPredicted RBP0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms