RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 TSPAN12O95859 305 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 C1QCP02747 245 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 APOA4P06727 396 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 TPM3P06753 285 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 HEXBP07686 556 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 OR56A5P0C7T3 313 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 C8orf89P0DMQ9 161 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 SMIM10L1P0DMW3 83 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 PPIAL4FP0DN26 164 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 RALBP11234 206 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 VCLP18206 1134 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 IL1RNP18510 177 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 TNNI3P19429 210 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 CELP19835 753 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 PTNP21246 168 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 MMP11P24347 488 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 TEAD1P28347 426 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 IMPA1P29218 277 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 STIP1P31948 543 aaKnown RBP0.93□□□□□ -2.26
SMG1-212ENST00000566328 RPA3P35244 121 aaPredicted RBP0.93□□□□□ -2.26
SMG1-212ENST00000566328 KRT20P35900 424 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 SLC26A3P40879 764 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 NSG1P42857 185 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 SLC1A2P43004 574 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 MAGEA4P43358 317 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 TNNT3P45378 269 aaPredicted RBP0.93□□□□□ -2.26
SMG1-212ENST00000566328 CD151P48509 253 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 STARP49675 285 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 PRLHRP49683 370 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 TNFSF10P50591 281 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 CCR6P51684 374 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 PLA2G16P53816 162 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 PLTPP55058 493 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 CASP9P55211 416 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 TAS2R39P59534 338 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 GPX6P59796 221 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 CSNK1G2P78368 415 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 ARG2P78540 354 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 ACVR1Q04771 509 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 PRDX1Q06830 199 aaKnown RBP0.93□□□□□ -2.26
SMG1-212ENST00000566328 C2orf54Q08AI8 447 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 C17orf67Q0P5P2 114 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 CDH17Q12864 832 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 KLRB1Q12918 225 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 PDIA2Q13087 525 aaKnown RBP0.93□□□□□ -2.26
SMG1-212ENST00000566328 EIF3IQ13347 325 aaKnown RBP0.93□□□□□ -2.26
SMG1-212ENST00000566328 MADCAM1Q13477 382 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 DOC2AQ14183 400 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 EIF2B1Q14232 305 aaKnown RBP0.93□□□□□ -2.26
SMG1-212ENST00000566328 GK2Q14410 553 aaPredicted RBP0.93□□□□□ -2.26
SMG1-212ENST00000566328 NCF4Q15080 339 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 PPP1R7Q15435 360 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 TSNQ15631 228 aaKnown RBP0.93□□□□□ -2.26
SMG1-212ENST00000566328 NSDHLQ15738 373 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 KBTBD12Q3ZCT8 623 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 BCL7AQ4VC05 210 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 SFT2D3Q587I9 215 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 ZNF470Q6ECI4 717 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 PPP1R2P3Q6NXS1 205 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 AGTRAPQ6RW13 159 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 AFTPHQ6ULP2 937 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 CLEC18BQ6UXF7 455 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 SYT10Q6XYQ8 523 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 C3orf62Q6ZUJ4 267 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 NDUFAF7Q7L592 441 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 OLIG3Q7RTU3 272 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 PRSS42Q7Z5A4 293 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 VN1R4Q7Z5H5 301 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 ANKRD37Q7Z713 158 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 KRT77Q7Z794 578 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 CMC1Q7Z7K0 106 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 GALNT10Q86SR1 603 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 HOOK3Q86VS8 718 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 THOC6Q86W42 341 aaKnown RBP0.93□□□□□ -2.26
SMG1-212ENST00000566328 PAQR7Q86WK9 346 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 OOSP2Q86WS3 158 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 DOLPP1Q86YN1 238 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 MED12LQ86YW9 2145 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 CRLF3Q8IUI8 442 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 CTAGE3PQ8IX95 158 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 SYCE1Q8N0S2 351 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 GPATCH11Q8N954 259 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 NAT8LQ8N9F0 302 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 FBXO36Q8NEA4 188 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 DUSP18Q8NEJ0 188 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 OR2L3Q8NG85 312 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 OR11G2Q8NGC1 345 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 OR6C4Q8NGE1 309 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 OR5M1Q8NGP8 315 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 OR2Y1Q8NGV0 311 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 OR51Q1Q8NH59 317 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 OR6X1Q8NH79 312 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 OR5K2Q8NHB8 316 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 LINC01560Q8TB33 94 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 DTX3LQ8TDB6 740 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 ASZ1Q8WWH4 475 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 SLC13A3Q8WWT9 602 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 IFT81Q8WYA0 676 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 PIGCQ92535 297 aa0.93□□□□□ -2.26
SMG1-212ENST00000566328 KIAA1143Q96AT1 154 aaPredicted RBP0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms