RNA–Protein interactions for RNA: ENST00000565236.1

CLN3-215, Transcript of CLN3, battenin, humanhuman

TSL 3

Gene CLN3, Length 582 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-215ENST00000565236 RSPO1Q2MKA7 263 aaPredicted RBP18.95■□□□□ 0.62
CLN3-215ENST00000565236 RPL13AP3Q6NVV1 102 aa18.95■□□□□ 0.62
CLN3-215ENST00000565236 CFAP77Q6ZQR2 320 aa18.95■□□□□ 0.62
CLN3-215ENST00000565236 LRRC28Q86X40 367 aaPredicted RBP18.95■□□□□ 0.62
CLN3-215ENST00000565236 NANPQ8TBE9 248 aa18.95■□□□□ 0.62
CLN3-215ENST00000565236 HCAR1Q9BXC0 346 aa18.95■□□□□ 0.62
CLN3-215ENST00000565236 EGLN3Q9H6Z9 239 aa18.95■□□□□ 0.62
CLN3-215ENST00000565236 CYB5R1Q9UHQ9 305 aa18.95■□□□□ 0.62
CLN3-215ENST00000565236 LYVE1Q9Y5Y7 322 aa18.95■□□□□ 0.62
CLN3-215ENST00000565236 IFNL4K9M1U5 179 aa18.94■□□□□ 0.62
CLN3-215ENST00000565236 RGS9O75916 674 aaPredicted RBP18.94■□□□□ 0.62
CLN3-215ENST00000565236 ZNF823P16415 610 aa18.94■□□□□ 0.62
CLN3-215ENST00000565236 BTG1P62324 171 aa18.94■□□□□ 0.62
CLN3-215ENST00000565236 TMEM155Q4W5P6 130 aa18.94■□□□□ 0.62
CLN3-215ENST00000565236 C1QL2Q7Z5L3 287 aa18.94■□□□□ 0.62
CLN3-215ENST00000565236 FITM2Q8N6M3 262 aa18.94■□□□□ 0.62
CLN3-215ENST00000565236 OR10AD1Q8NGE0 317 aa18.94■□□□□ 0.62
CLN3-215ENST00000565236 OR9Q2Q8NGE9 314 aa18.94■□□□□ 0.62
CLN3-215ENST00000565236 NSL1Q96IY1 281 aa18.94■□□□□ 0.62
CLN3-215ENST00000565236 ATF6BQ99941 703 aa18.94■□□□□ 0.62
CLN3-215ENST00000565236 C1QTNF5Q9BXJ0 243 aa18.94■□□□□ 0.62
CLN3-215ENST00000565236 TRIM15Q9C019 465 aa18.94■□□□□ 0.62
CLN3-215ENST00000565236 WDR76Q9H967 626 aa18.94■□□□□ 0.62
CLN3-215ENST00000565236 PATZ1Q9HBE1 687 aaKnown RBP18.94■□□□□ 0.62
CLN3-215ENST00000565236 GCM1Q9NP62 436 aa18.94■□□□□ 0.62
CLN3-215ENST00000565236 CDH10Q9Y6N8 788 aa18.94■□□□□ 0.62
CLN3-215ENST00000565236 ACSM4P0C7M7 580 aa18.93■□□□□ 0.62
CLN3-215ENST00000565236 SELEP16581 610 aa18.93■□□□□ 0.62
CLN3-215ENST00000565236 ADRA2CP18825 462 aa18.93■□□□□ 0.62
CLN3-215ENST00000565236 ATP6V1B2P21281 511 aa18.93■□□□□ 0.62
CLN3-215ENST00000565236 GGT2P36268 569 aa18.93■□□□□ 0.62
CLN3-215ENST00000565236 SRP9P49458 86 aaKnown RBP18.93■□□□□ 0.62
CLN3-215ENST00000565236 ZMYND11Q15326 602 aa18.93■□□□□ 0.62
CLN3-215ENST00000565236 COLCA1Q6ZS62 124 aa18.93■□□□□ 0.62
CLN3-215ENST00000565236 BHLHE23Q8NDY6 225 aa18.93■□□□□ 0.62
CLN3-215ENST00000565236 CCT8L2Q96SF2 557 aa18.93■□□□□ 0.62
CLN3-215ENST00000565236 BTBD10Q9BSF8 475 aa18.93■□□□□ 0.62
CLN3-215ENST00000565236 IL20Q9NYY1 176 aa18.93■□□□□ 0.62
CLN3-215ENST00000565236 KCNG2Q9UJ96 466 aa18.93■□□□□ 0.62
CLN3-215ENST00000565236 PPIAL4EA0A075B759 164 aa18.92■□□□□ 0.62
CLN3-215ENST00000565236 PPIAL4CA0A0B4J2A2 164 aa18.92■□□□□ 0.62
CLN3-215ENST00000565236 IQCF6A8MYZ5 107 aa18.92■□□□□ 0.62
CLN3-215ENST00000565236 PPIAL4DF5H284 164 aa18.92■□□□□ 0.62
CLN3-215ENST00000565236 TMEM178BH3BS89 294 aa18.92■□□□□ 0.62
CLN3-215ENST00000565236 HAX1O00165 279 aa18.92■□□□□ 0.62
CLN3-215ENST00000565236 CCNB2O95067 398 aa18.92■□□□□ 0.62
CLN3-215ENST00000565236 GASTP01350 101 aa18.92■□□□□ 0.62
CLN3-215ENST00000565236 LCATP04180 440 aa18.92■□□□□ 0.62
CLN3-215ENST00000565236 PPIAL4FP0DN26 164 aa18.92■□□□□ 0.62
CLN3-215ENST00000565236 ZFP36P26651 326 aaKnown RBP18.92■□□□□ 0.62
CLN3-215ENST00000565236 MALLQ13021 153 aa18.92■□□□□ 0.62
CLN3-215ENST00000565236 KRTAP27-1Q3LI81 207 aa18.92■□□□□ 0.62
CLN3-215ENST00000565236 ARHGAP24Q8N264 748 aa18.92■□□□□ 0.62
CLN3-215ENST00000565236 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.92■□□□□ 0.62
CLN3-215ENST00000565236 CYB561A3Q8NBI2 242 aa18.92■□□□□ 0.62
CLN3-215ENST00000565236 PROKR2Q8NFJ6 384 aa18.92■□□□□ 0.62
CLN3-215ENST00000565236 ZFAND2BQ8WV99 257 aa18.92■□□□□ 0.62
CLN3-215ENST00000565236 MEGF10Q96KG7 1140 aa18.92■□□□□ 0.62
CLN3-215ENST00000565236 SIGLEC11Q96RL6 698 aa18.92■□□□□ 0.62
CLN3-215ENST00000565236 SLC30A2Q9BRI3 323 aa18.92■□□□□ 0.62
CLN3-215ENST00000565236 TMEM100Q9NV29 134 aa18.92■□□□□ 0.62
CLN3-215ENST00000565236 MRPL22Q9NWU5 206 aaKnown RBP18.92■□□□□ 0.62
CLN3-215ENST00000565236 ANK2Q01484 3957 aa18.92■□□□□ 0.62
CLN3-215ENST00000565236 H0YL77 283 aa18.91■□□□□ 0.62
CLN3-215ENST00000565236 BHLHE40O14503 412 aa18.91■□□□□ 0.62
CLN3-215ENST00000565236 PYCR1P32322 319 aa18.91■□□□□ 0.62
CLN3-215ENST00000565236 MDH2P40926 338 aaKnown RBP18.91■□□□□ 0.62
CLN3-215ENST00000565236 MAGEA2P43356 314 aa18.91■□□□□ 0.62
CLN3-215ENST00000565236 TPTEP56180 551 aa18.91■□□□□ 0.62
CLN3-215ENST00000565236 TRAP1Q12931 704 aaKnown RBP18.91■□□□□ 0.62
CLN3-215ENST00000565236 RASSF6Q6ZTQ3 369 aa18.91■□□□□ 0.62
CLN3-215ENST00000565236 USP43Q70EL4 1123 aa18.91■□□□□ 0.62
CLN3-215ENST00000565236 NAA40Q86UY6 237 aa18.91■□□□□ 0.62
CLN3-215ENST00000565236 DHFR2Q86XF0 187 aa18.91■□□□□ 0.62
CLN3-215ENST00000565236 SEMA6DQ8NFY4 1073 aa18.91■□□□□ 0.62
CLN3-215ENST00000565236 OR4C15Q8NGM1 316 aa18.91■□□□□ 0.62
CLN3-215ENST00000565236 OR2T4Q8NH00 348 aa18.91■□□□□ 0.62
CLN3-215ENST00000565236 MUC13Q9H3R2 512 aa18.91■□□□□ 0.62
CLN3-215ENST00000565236 MAGIXQ9H6Y5 334 aa18.91■□□□□ 0.62
CLN3-215ENST00000565236 OPN4Q9UHM6 478 aa18.91■□□□□ 0.62
CLN3-215ENST00000565236 TCRBV5S2A0A599 114 aa18.9■□□□□ 0.62
CLN3-215ENST00000565236 SLC6A9P48067 706 aa18.9■□□□□ 0.62
CLN3-215ENST00000565236 MMP16P51512 607 aa18.9■□□□□ 0.62
CLN3-215ENST00000565236 PPP1R8Q12972 351 aaKnown RBP18.9■□□□□ 0.62
CLN3-215ENST00000565236 GK2Q14410 553 aaPredicted RBP18.9■□□□□ 0.62
CLN3-215ENST00000565236 ZNF770Q6IQ21 691 aaPredicted RBP18.9■□□□□ 0.62
CLN3-215ENST00000565236 MUC20Q8N307 709 aaPredicted RBP18.9■□□□□ 0.62
CLN3-215ENST00000565236 AQP11Q8NBQ7 271 aa18.9■□□□□ 0.62
CLN3-215ENST00000565236 ZNF420Q8TAQ5 688 aaPredicted RBP18.9■□□□□ 0.62
CLN3-215ENST00000565236 SPTSSAQ969W0 71 aa18.9■□□□□ 0.62
CLN3-215ENST00000565236 MAP6Q96JE9 813 aa18.9■□□□□ 0.62
CLN3-215ENST00000565236 JMJD8Q96S16 334 aa18.9■□□□□ 0.62
CLN3-215ENST00000565236 DDOQ99489 341 aa18.9■□□□□ 0.62
CLN3-215ENST00000565236 PLA2G12AQ9BZM1 189 aa18.9■□□□□ 0.62
CLN3-215ENST00000565236 PNRC2Q9NPJ4 139 aaKnown RBP18.9■□□□□ 0.62
CLN3-215ENST00000565236 TBC1D23Q9NUY8 699 aa18.9■□□□□ 0.62
CLN3-215ENST00000565236 TVP23AA6NH52 213 aa18.89■□□□□ 0.61
CLN3-215ENST00000565236 F5H5P2 479 aa18.89■□□□□ 0.61
CLN3-215ENST00000565236 MLNRO43193 412 aa18.89■□□□□ 0.61
CLN3-215ENST00000565236 HILS1P60008 231 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms