RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 PFN2P35080 140 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 CDKN2BP42772 138 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 PTPN20Q4JDL3 420 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 GCSAMLQ5JQS6 135 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 C6orf120Q7Z4R8 191 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 ZNF429Q86V71 674 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 FAM86B1Q8N7N1 296 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 C11orf72Q8NBR9 251 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 CHST4Q8NCG5 386 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 RDH5Q92781 318 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 TMIGD2Q96BF3 282 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 RNF145Q96MT1 663 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 TM6SF2Q9BZW4 377 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 NAA50Q9GZZ1 169 aaKnown RBP1.73□□□□□ -2.13
CHD9-209ENST00000564255 MCUBQ9NWR8 336 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 SMAD5-AS1Q9Y6J3 95 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 SMARCA4P51532 1647 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 MAGI1Q96QZ7 1491 aaPredicted RBP1.73□□□□□ -2.13
CHD9-209ENST00000564255 MN1Q10571 1320 aaPredicted RBP1.73□□□□□ -2.13
CHD9-209ENST00000564255 URB2Q14146 1524 aaKnown RBP1.73□□□□□ -2.13
CHD9-209ENST00000564255 ZNF608Q9ULD9 1512 aaPredicted RBP1.73□□□□□ -2.13
CHD9-209ENST00000564255 SBNO1A3KN83 1393 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 JCADQ9P266 1359 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 IGHV3-74A0A0B4J1X5 117 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 A0A1W2PRF3 423 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 A0A1W2PRM7 423 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 HOXB8P17481 243 aaPredicted RBP1.73□□□□□ -2.13
CHD9-209ENST00000564255 IVDP26440 423 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 CEACAM6P40199 344 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 CXCL5P42830 114 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 LHX2P50458 406 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 ZNF136P52737 540 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 KIR2DS1Q14954 304 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 C12orf54Q6X4T0 127 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 ZNF547Q8IVP9 402 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 FAM71AQ8IYT1 594 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 ARHGAP18Q8N392 663 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 BAALCQ8WXS3 180 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 RGP1Q92546 391 aaPredicted RBP1.73□□□□□ -2.13
CHD9-209ENST00000564255 FAM104AQ969W3 186 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 FAM131CQ96AQ9 280 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 ELSPBP1Q96BH3 223 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 NRBF2Q96F24 287 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 ZBED3Q96IU2 234 aaPredicted RBP1.73□□□□□ -2.13
CHD9-209ENST00000564255 BTN2A3PQ96KV6 586 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 ZNF681Q96N22 645 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 CDC42EP4Q9H3Q1 356 aaKnown RBP1.73□□□□□ -2.13
CHD9-209ENST00000564255 UBE2ZQ9H832 354 aaPredicted RBP1.73□□□□□ -2.13
CHD9-209ENST00000564255 DEC1Q9P2X7 70 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 CD84Q9UIB8 345 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 DDX19BQ9UMR2 479 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 STK38LQ9Y2H1 464 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 SIGLEC1Q9BZZ2 1709 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 KIF13AQ9H1H9 1805 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 IGHV3OR16-9A0A0B4J2B5 98 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 A0A1B0GUA9 196 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 CENPXA8MT69 81 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 H7C417 338 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 MPDU1O75352 247 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 LCA5LO95447 670 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 EIF4EP06730 217 aaKnown RBP1.73□□□□□ -2.13
CHD9-209ENST00000564255 GGT1P19440 569 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 RAB5AP20339 215 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 VSX2P58304 361 aaPredicted RBP1.73□□□□□ -2.13
CHD9-209ENST00000564255 SLC39A6Q13433 755 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 PON2Q15165 354 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 CCDC122Q5T0U0 273 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 ABHD12BQ7Z5M8 362 aaPredicted RBP1.73□□□□□ -2.13
CHD9-209ENST00000564255 MDS2Q8NDY4 140 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 TCP10LQ8TDR4 215 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 RNF138Q8WVD3 245 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 C17orf50Q8WW18 174 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 MSANTD3Q96H12 275 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 CHAC1Q9BUX1 264 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 SLC39A1Q9NY26 324 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 ADAM22Q9P0K1 906 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 IFNKQ9P0W0 207 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 MTFP1Q9UDX5 166 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 FLVCR2Q9UPI3 526 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 CACNG2Q9Y698 323 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 AQRO60306 1485 aaKnown RBP eCLIP1.73□□□□□ -2.136e-7■■□□□ 14.1
CHD9-209ENST00000564255 CFTRP13569 1480 aa1.73□□□□□ -2.13
CHD9-209ENST00000564255 CHD1O14646 1710 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 PCF11O94913 1555 aaKnown RBP1.72□□□□□ -2.13
CHD9-209ENST00000564255 IGLV11-55A0A075B6I3 123 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 LOC100506127A0A0U1RQW1 187 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 FAM166BA8MTA8 275 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 ZNF879B4DU55 563 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 ANKRD65E5RJM6 399 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 H7C1H1 209 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 PSMD11O00231 422 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 GABRPO00591 440 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 CD5LO43866 347 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 CATP04040 527 aaKnown RBP1.72□□□□□ -2.13
CHD9-209ENST00000564255 FABP3P05413 133 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 CD3GP09693 182 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 PGA4P0DJD7 388 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 PGA3P0DJD8 388 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 PGA5P0DJD9 388 aa1.72□□□□□ -2.13
CHD9-209ENST00000564255 ADRB3P13945 408 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms