RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 TRAPPC2LH3BP13 241 aa13.41□□□□□ -0.26
RNF40-205ENST00000563909 M0R3G1 203 aa13.41□□□□□ -0.26
RNF40-205ENST00000563909 XKRYO14609 159 aa13.41□□□□□ -0.26
RNF40-205ENST00000563909 IDH3BO43837 385 aa13.41□□□□□ -0.26
RNF40-205ENST00000563909 PGA4P0DJD7 388 aa13.41□□□□□ -0.26
RNF40-205ENST00000563909 PGA3P0DJD8 388 aa13.41□□□□□ -0.26
RNF40-205ENST00000563909 IGHV4-38-2P0DP08 117 aa13.41□□□□□ -0.26
RNF40-205ENST00000563909 OSMP13725 252 aa13.41□□□□□ -0.26
RNF40-205ENST00000563909 DAPP51397 102 aa13.41□□□□□ -0.26
RNF40-205ENST00000563909 ELF3P78545 371 aaPredicted RBP13.41□□□□□ -0.26
RNF40-205ENST00000563909 FAM122BQ7Z309 247 aa13.41□□□□□ -0.26
RNF40-205ENST00000563909 NOXO1Q8NFA2 376 aa13.41□□□□□ -0.26
RNF40-205ENST00000563909 OR52E2Q8NGJ4 325 aa13.41□□□□□ -0.26
RNF40-205ENST00000563909 ZNF519Q8TB69 540 aa13.41□□□□□ -0.26
RNF40-205ENST00000563909 TEX47Q8TBZ9 253 aa13.41□□□□□ -0.26
RNF40-205ENST00000563909 GTF3AQ92664 365 aaKnown RBP13.41□□□□□ -0.26
RNF40-205ENST00000563909 Q96M85 177 aa13.41□□□□□ -0.26
RNF40-205ENST00000563909 ERMAPQ96PL5 475 aaPredicted RBP13.41□□□□□ -0.26
RNF40-205ENST00000563909 ALG12Q9BV10 488 aa13.41□□□□□ -0.26
RNF40-205ENST00000563909 TSSK6Q9BXA6 273 aa13.41□□□□□ -0.26
RNF40-205ENST00000563909 MRPL13Q9BYD1 178 aaKnown RBP13.41□□□□□ -0.26
RNF40-205ENST00000563909 ULBP2Q9BZM5 246 aa13.41□□□□□ -0.26
RNF40-205ENST00000563909 RASSF4Q9H2L5 321 aa13.41□□□□□ -0.26
RNF40-205ENST00000563909 PAPOLBQ9NRJ5 636 aaKnown RBP13.41□□□□□ -0.26
RNF40-205ENST00000563909 DECR2Q9NUI1 292 aa13.41□□□□□ -0.26
RNF40-205ENST00000563909 BAIAP2Q9UQB8 552 aa13.41□□□□□ -0.26
RNF40-205ENST00000563909 ADAM18Q9Y3Q7 739 aa13.41□□□□□ -0.26
RNF40-205ENST00000563909 EPPK1P58107 5090 aaKnown RBP13.41□□□□□ -0.26
RNF40-205ENST00000563909 AHCYL1O43865 530 aa13.4□□□□□ -0.26
RNF40-205ENST00000563909 SOX14O95416 240 aa13.4□□□□□ -0.26
RNF40-205ENST00000563909 PPP1R3DO95685 299 aa13.4□□□□□ -0.26
RNF40-205ENST00000563909 TXNDC12O95881 172 aa13.4□□□□□ -0.26
RNF40-205ENST00000563909 CLPTM1O96005 669 aa13.4□□□□□ -0.26
RNF40-205ENST00000563909 ZNF12P17014 697 aa13.4□□□□□ -0.26
RNF40-205ENST00000563909 ZNF14P17017 642 aaPredicted RBP13.4□□□□□ -0.26
RNF40-205ENST00000563909 NOS3P29474 1203 aa13.4□□□□□ -0.26
RNF40-205ENST00000563909 HIST3H3Q16695 136 aa13.4□□□□□ -0.26
RNF40-205ENST00000563909 SLC36A3Q495N2 470 aa13.4□□□□□ -0.26
RNF40-205ENST00000563909 CLEC12AQ5QGZ9 265 aa13.4□□□□□ -0.26
RNF40-205ENST00000563909 PHYHD1Q5SRE7 291 aa13.4□□□□□ -0.26
RNF40-205ENST00000563909 C9orf139Q6ZV77 190 aa13.4□□□□□ -0.26
RNF40-205ENST00000563909 OR2T33Q8NG76 320 aa13.4□□□□□ -0.26
RNF40-205ENST00000563909 SNX33Q8WV41 574 aa13.4□□□□□ -0.26
RNF40-205ENST00000563909 CCL17Q92583 94 aa13.4□□□□□ -0.26
RNF40-205ENST00000563909 HDAC2Q92769 488 aaKnown RBP13.4□□□□□ -0.26
RNF40-205ENST00000563909 ZNF75AQ96N20 296 aa13.4□□□□□ -0.26
RNF40-205ENST00000563909 RBP7Q96R05 134 aa13.4□□□□□ -0.26
RNF40-205ENST00000563909 SLC30A2Q9BRI3 323 aa13.4□□□□□ -0.26
RNF40-205ENST00000563909 KRT84Q9NSB2 600 aa13.4□□□□□ -0.26
RNF40-205ENST00000563909 NKIRAS2Q9NYR9 191 aa13.4□□□□□ -0.26
RNF40-205ENST00000563909 ASH2LQ9UBL3 628 aa13.4□□□□□ -0.26
RNF40-205ENST00000563909 ENOPH1Q9UHY7 261 aa13.4□□□□□ -0.26
RNF40-205ENST00000563909 INSIG2Q9Y5U4 225 aa13.4□□□□□ -0.26
RNF40-205ENST00000563909 BIRC6Q9NR09 4857 aa13.4□□□□□ -0.26
RNF40-205ENST00000563909 TEX13CA0A0J9YWL9 993 aa13.39□□□□□ -0.27
RNF40-205ENST00000563909 H0YHG0 523 aa13.39□□□□□ -0.27
RNF40-205ENST00000563909 BHLHE40O14503 412 aa13.39□□□□□ -0.27
RNF40-205ENST00000563909 PTDSS1P48651 473 aaKnown RBP13.39□□□□□ -0.27
RNF40-205ENST00000563909 SELENOVP59797 346 aa13.39□□□□□ -0.27
RNF40-205ENST00000563909 CD47Q08722 323 aa13.39□□□□□ -0.27
RNF40-205ENST00000563909 KRR1Q13601 381 aaKnown RBP13.39□□□□□ -0.27
RNF40-205ENST00000563909 PDCD1Q15116 288 aa13.39□□□□□ -0.27
RNF40-205ENST00000563909 RCN1Q15293 331 aa13.39□□□□□ -0.27
RNF40-205ENST00000563909 TSTQ16762 297 aaKnown RBP13.39□□□□□ -0.27
RNF40-205ENST00000563909 C2orf68Q2NKX9 166 aa13.39□□□□□ -0.27
RNF40-205ENST00000563909 THEM4Q5T1C6 240 aa13.39□□□□□ -0.27
RNF40-205ENST00000563909 SAMD5Q5TGI4 173 aa13.39□□□□□ -0.27
RNF40-205ENST00000563909 KDM4DQ6B0I6 523 aa13.39□□□□□ -0.27
RNF40-205ENST00000563909 ZNF813Q6ZN06 617 aa13.39□□□□□ -0.27
RNF40-205ENST00000563909 ADCK1Q86TW2 530 aa13.39□□□□□ -0.27
RNF40-205ENST00000563909 PARP8Q8N3A8 854 aa13.39□□□□□ -0.27
RNF40-205ENST00000563909 LNX2Q8N448 690 aa13.39□□□□□ -0.27
RNF40-205ENST00000563909 OR8D4Q8NGM9 314 aa13.39□□□□□ -0.27
RNF40-205ENST00000563909 ZDHHC16Q969W1 377 aa13.39□□□□□ -0.27
RNF40-205ENST00000563909 RASD2Q96D21 266 aa13.39□□□□□ -0.27
RNF40-205ENST00000563909 CIB1Q99828 191 aa13.39□□□□□ -0.27
RNF40-205ENST00000563909 C9orf16Q9BUW7 83 aa13.39□□□□□ -0.27
RNF40-205ENST00000563909 DCLRE1BQ9H816 532 aa13.39□□□□□ -0.27
RNF40-205ENST00000563909 SMURF2Q9HAU4 748 aa13.39□□□□□ -0.27
RNF40-205ENST00000563909 SRRM5B3KS81 715 aa13.38□□□□□ -0.27
RNF40-205ENST00000563909 SOCS2O14508 198 aa13.38□□□□□ -0.27
RNF40-205ENST00000563909 DHHO43323 396 aa13.38□□□□□ -0.27
RNF40-205ENST00000563909 QDPRP09417 244 aa13.38□□□□□ -0.27
RNF40-205ENST00000563909 POU1F1P28069 291 aa13.38□□□□□ -0.27
RNF40-205ENST00000563909 ZNF133P52736 654 aaPredicted RBP13.38□□□□□ -0.27
RNF40-205ENST00000563909 ESRRGP62508 458 aa13.38□□□□□ -0.27
RNF40-205ENST00000563909 MESTQ5EB52 335 aa13.38□□□□□ -0.27
RNF40-205ENST00000563909 SLC27A4Q6P1M0 643 aa13.38□□□□□ -0.27
RNF40-205ENST00000563909 LRFN4Q6PJG9 635 aa13.38□□□□□ -0.27
RNF40-205ENST00000563909 MCHR2Q969V1 340 aa13.38□□□□□ -0.27
RNF40-205ENST00000563909 TEX12Q9BXU0 123 aa13.38□□□□□ -0.27
RNF40-205ENST00000563909 MARCH7Q9H992 704 aa13.38□□□□□ -0.27
RNF40-205ENST00000563909 SAP30LQ9HAJ7 183 aa13.38□□□□□ -0.27
RNF40-205ENST00000563909 USE1Q9NZ43 259 aa13.38□□□□□ -0.27
RNF40-205ENST00000563909 PRSS37A4D1T9 235 aa13.37□□□□□ -0.27
RNF40-205ENST00000563909 C5orf63A6NC05 138 aa13.37□□□□□ -0.27
RNF40-205ENST00000563909 CLPXO76031 633 aa13.37□□□□□ -0.27
RNF40-205ENST00000563909 RAB36O95755 333 aa13.37□□□□□ -0.27
RNF40-205ENST00000563909 RENP00797 406 aa13.37□□□□□ -0.27
RNF40-205ENST00000563909 CSF1P09603 554 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms