RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 AVPR2P30518 371 aa5.71□□□□□ -1.49
CLK3-212ENST00000563418 ARR3P36575 388 aa5.71□□□□□ -1.49
CLK3-212ENST00000563418 GPR18Q14330 331 aa5.71□□□□□ -1.49
CLK3-212ENST00000563418 SLC25A35Q3KQZ1 300 aa5.71□□□□□ -1.49
CLK3-212ENST00000563418 ZNF805Q5CZA5 627 aa5.71□□□□□ -1.49
CLK3-212ENST00000563418 GLYATL3Q5SZD4 288 aa5.71□□□□□ -1.49
CLK3-212ENST00000563418 CYB561A3Q8NBI2 242 aa5.71□□□□□ -1.49
CLK3-212ENST00000563418 STARD10Q9Y365 291 aa5.71□□□□□ -1.49
CLK3-212ENST00000563418 MKRN2OSH3BPM6 223 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 CD1CP29017 333 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 IL13RA2Q14627 380 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 PDLIM3Q53GG5 364 aaPredicted RBP5.71□□□□□ -1.5
CLK3-212ENST00000563418 IL22RA2Q969J5 263 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 ZNF689Q96CS4 500 aaPredicted RBP5.71□□□□□ -1.5
CLK3-212ENST00000563418 SEH1LQ96EE3 360 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 DAZAP1Q96EP5 407 aaKnown RBP5.71□□□□□ -1.5
CLK3-212ENST00000563418 TMEM191AQ9H0A3 160 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 ASPDHA6ND91 283 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 GEMIN2O14893 280 aaKnown RBP5.71□□□□□ -1.5
CLK3-212ENST00000563418 DEDDO75618 318 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 CRISP2P16562 243 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 PMCHP20382 165 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 OMGP23515 440 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 SLC6A8P48029 635 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 AMTP48728 403 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 TRMT12Q53H54 448 aaKnown RBP5.71□□□□□ -1.5
CLK3-212ENST00000563418 C14orf144Q96I85 54 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 OR8B4Q96RC9 309 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 TEAD3Q99594 435 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 SDHCQ99643 169 aaPredicted RBP5.71□□□□□ -1.5
CLK3-212ENST00000563418 PRODH2Q9UF12 536 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 WASHC3Q9Y3C0 194 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 CAMTA1Q9Y6Y1 1673 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 DIRC3C9JPN6 131 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 GLCEO94923 617 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 GJB1P08034 283 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 ZNF43P17038 809 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 COX5AP20674 150 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 MDH2P40926 338 aaKnown RBP5.71□□□□□ -1.5
CLK3-212ENST00000563418 NUBP1P53384 320 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 ACTR1AP61163 376 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 CNN3Q15417 329 aaKnown RBP5.71□□□□□ -1.5
CLK3-212ENST00000563418 CATSPERDQ86XM0 798 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 OR8G5Q8NG78 346 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 OR5A2Q8NGI9 324 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 TMEM234Q8WY98 164 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 TFGQ92734 400 aaPredicted RBP5.71□□□□□ -1.5
CLK3-212ENST00000563418 GPR20Q99678 358 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 CHST5Q9GZS9 411 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 OSER1Q9NX31 292 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 IER3IP1Q9Y5U9 82 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 ALS2Q96Q42 1657 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 A0A1W2PQ45 241 aaPredicted RBP5.71□□□□□ -1.5
CLK3-212ENST00000563418 A0A1W2PQY0 241 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 HPXP02790 462 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 HTR5AP47898 357 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 FAAP20Q6NZ36 180 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 SUMF1Q8NBK3 374 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 LHX4Q969G2 390 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 MOB3AQ96BX8 217 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 GALNT14Q96FL9 552 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 ATP5SQ99766 215 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 CACFD1Q9UGQ2 172 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 USP3Q9Y6I4 520 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 TLCD2A6NGC4 264 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 CD8AP01732 235 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 HSPB1P04792 205 aaKnown RBP5.71□□□□□ -1.5
CLK3-212ENST00000563418 MMP2P08253 660 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 CD14P08571 375 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 NTF3P20783 257 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 ATP5IP56385 69 aaPredicted RBP5.71□□□□□ -1.5
CLK3-212ENST00000563418 FXYD4P59646 89 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 SPATA45Q537H7 98 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 CISD2Q8N5K1 135 aaKnown RBP5.71□□□□□ -1.5
CLK3-212ENST00000563418 RSG1Q9BU20 258 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 C11orf84Q9BUA3 381 aaPredicted RBP5.71□□□□□ -1.5
CLK3-212ENST00000563418 BCAS3Q9H6U6 928 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 PHPT1Q9NRX4 125 aaPredicted RBP5.71□□□□□ -1.5
CLK3-212ENST00000563418 DNMT3BQ9UBC3 853 aaKnown RBP5.71□□□□□ -1.5
CLK3-212ENST00000563418 TAC3Q9UHF0 121 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 ROBO1Q9Y6N7 1651 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 SOCS6O14544 535 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 TOX3O15405 576 aaPredicted RBP5.71□□□□□ -1.5
CLK3-212ENST00000563418 PRKRAO75569 313 aaKnown RBP5.71□□□□□ -1.5
CLK3-212ENST00000563418 AKR1A1P14550 325 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 GNB3P16520 340 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 ZNF16P17020 682 aaPredicted RBP5.71□□□□□ -1.5
CLK3-212ENST00000563418 BRS3P32247 399 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 TAF10Q12962 218 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 PHF19Q5T6S3 580 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 ZNF573Q86YE8 665 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 P2RY12Q9H244 342 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 FBRSQ9HAH7 460 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 KCNK12Q9HB15 430 aa5.71□□□□□ -1.5
CLK3-212ENST00000563418 HRH1P35367 487 aa5.7□□□□□ -1.5
CLK3-212ENST00000563418 CYHR1Q6ZMK1 362 aa5.7□□□□□ -1.5
CLK3-212ENST00000563418 Q7L0L9 218 aa5.7□□□□□ -1.5
CLK3-212ENST00000563418 SLC25A42Q86VD7 318 aa5.7□□□□□ -1.5
CLK3-212ENST00000563418 ARHGEF39Q8N4T4 335 aa5.7□□□□□ -1.5
CLK3-212ENST00000563418 CDRT4Q8N9R6 151 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms