RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 VSX1Q9NZR4 365 aaPredicted RBP10.86□□□□□ -0.67
SF3B3-202ENST00000562722 ARMCX1Q9P291 453 aa10.86□□□□□ -0.67
SF3B3-202ENST00000562722 ATPIF1Q9UII2 106 aa10.86□□□□□ -0.67
SF3B3-202ENST00000562722 FAM32AQ9Y421 112 aaKnown RBP10.86□□□□□ -0.67
SF3B3-202ENST00000562722 IER3IP1Q9Y5U9 82 aa10.86□□□□□ -0.67
SF3B3-202ENST00000562722 MLNRO43193 412 aa10.85□□□□□ -0.67
SF3B3-202ENST00000562722 PLATP00750 562 aa10.85□□□□□ -0.67
SF3B3-202ENST00000562722 KNG1P01042 644 aa10.85□□□□□ -0.67
SF3B3-202ENST00000562722 H1F0P07305 194 aaKnown RBP10.85□□□□□ -0.67
SF3B3-202ENST00000562722 SELEP16581 610 aa10.85□□□□□ -0.67
SF3B3-202ENST00000562722 FPR3P25089 353 aa10.85□□□□□ -0.67
SF3B3-202ENST00000562722 RPS6KA3P51812 740 aa10.85□□□□□ -0.67
SF3B3-202ENST00000562722 PRSS12P56730 875 aa10.85□□□□□ -0.67
SF3B3-202ENST00000562722 FGF12P61328 243 aa10.85□□□□□ -0.67
SF3B3-202ENST00000562722 PAX2Q02962 417 aa10.85□□□□□ -0.67
SF3B3-202ENST00000562722 MEP1BQ16820 701 aa10.85□□□□□ -0.67
SF3B3-202ENST00000562722 DEFB112Q30KQ8 113 aa10.85□□□□□ -0.67
SF3B3-202ENST00000562722 ZNF404Q494X3 552 aa10.85□□□□□ -0.67
SF3B3-202ENST00000562722 MIDNQ504T8 468 aa10.85□□□□□ -0.67
SF3B3-202ENST00000562722 PDLIM3Q53GG5 364 aaPredicted RBP10.85□□□□□ -0.67
SF3B3-202ENST00000562722 GPR157Q5UAW9 335 aa10.85□□□□□ -0.67
SF3B3-202ENST00000562722 PGM2L1Q6PCE3 622 aa10.85□□□□□ -0.67
SF3B3-202ENST00000562722 CORO6Q6QEF8 472 aa10.85□□□□□ -0.67
SF3B3-202ENST00000562722 CBLL1Q75N03 491 aa10.85□□□□□ -0.67
SF3B3-202ENST00000562722 OR11L1Q8NGX0 322 aa10.85□□□□□ -0.67
SF3B3-202ENST00000562722 SLC7A13Q8TCU3 470 aa10.85□□□□□ -0.67
SF3B3-202ENST00000562722 TSSK2Q96PF2 358 aa10.85□□□□□ -0.67
SF3B3-202ENST00000562722 TECTBQ96PL2 329 aa10.85□□□□□ -0.67
SF3B3-202ENST00000562722 COQ7Q99807 217 aa10.85□□□□□ -0.67
SF3B3-202ENST00000562722 SLC30A2Q9BRI3 323 aa10.85□□□□□ -0.67
SF3B3-202ENST00000562722 SLITRK2Q9H156 845 aa10.85□□□□□ -0.67
SF3B3-202ENST00000562722 MMADHCQ9H3L0 296 aaPredicted RBP10.85□□□□□ -0.67
SF3B3-202ENST00000562722 ANKRD19PQ9H560 264 aa10.85□□□□□ -0.67
SF3B3-202ENST00000562722 NRIP3Q9NQ35 241 aa10.85□□□□□ -0.67
SF3B3-202ENST00000562722 KIF17Q9P2E2 1029 aa10.85□□□□□ -0.67
SF3B3-202ENST00000562722 RPS6KA6Q9UK32 745 aa10.85□□□□□ -0.67
SF3B3-202ENST00000562722 AURKCQ9UQB9 309 aa10.85□□□□□ -0.67
SF3B3-202ENST00000562722 KIR2DS1A0A191URI9 304 aa10.84□□□□□ -0.67
SF3B3-202ENST00000562722 UNC119BA6NIH7 251 aa10.84□□□□□ -0.67
SF3B3-202ENST00000562722 IQCF6A8MYZ5 107 aa10.84□□□□□ -0.67
SF3B3-202ENST00000562722 CRABP1P29762 137 aa10.84□□□□□ -0.67
SF3B3-202ENST00000562722 SLC7A2P52569 658 aa10.84□□□□□ -0.67
SF3B3-202ENST00000562722 MALLQ13021 153 aa10.84□□□□□ -0.67
SF3B3-202ENST00000562722 ZNF181Q2M3W8 571 aa10.84□□□□□ -0.67
SF3B3-202ENST00000562722 DPY19L2P2Q6ZN68 376 aa10.84□□□□□ -0.67
SF3B3-202ENST00000562722 PTCHD4Q6ZW05 846 aa10.84□□□□□ -0.67
SF3B3-202ENST00000562722 SLC15A3Q8IY34 581 aa10.84□□□□□ -0.67
SF3B3-202ENST00000562722 BOLLQ8N9W6 283 aaKnown RBP10.84□□□□□ -0.67
SF3B3-202ENST00000562722 C19orf18Q8NEA5 215 aa10.84□□□□□ -0.67
SF3B3-202ENST00000562722 PCGF1Q9BSM1 259 aa10.84□□□□□ -0.67
SF3B3-202ENST00000562722 CDADC1Q9BWV3 514 aa10.84□□□□□ -0.67
SF3B3-202ENST00000562722 MARCH7Q9H992 704 aa10.84□□□□□ -0.67
SF3B3-202ENST00000562722 VIPAS39Q9H9C1 493 aa10.84□□□□□ -0.67
SF3B3-202ENST00000562722 BEX1Q9HBH7 125 aa10.84□□□□□ -0.67
SF3B3-202ENST00000562722 UFSP2Q9NUQ7 469 aa10.84□□□□□ -0.67
SF3B3-202ENST00000562722 ARGLU1Q9NWB6 273 aaPredicted RBP10.84□□□□□ -0.67
SF3B3-202ENST00000562722 SIGLEC7Q9Y286 467 aa10.84□□□□□ -0.67
SF3B3-202ENST00000562722 LHFPL6Q9Y693 200 aa10.84□□□□□ -0.67
SF3B3-202ENST00000562722 ENPP4Q9Y6X5 453 aa10.84□□□□□ -0.67
SF3B3-202ENST00000562722 FAM181BA6NEQ2 426 aa10.83□□□□□ -0.68
SF3B3-202ENST00000562722 SRRM5B3KS81 715 aa10.83□□□□□ -0.68
SF3B3-202ENST00000562722 F5H5K5 113 aa10.83□□□□□ -0.68
SF3B3-202ENST00000562722 PHYHO14832 338 aa10.83□□□□□ -0.68
SF3B3-202ENST00000562722 ENSAO43768 121 aaKnown RBP10.83□□□□□ -0.68
SF3B3-202ENST00000562722 PTP4A3O75365 173 aa10.83□□□□□ -0.68
SF3B3-202ENST00000562722 PPP1R3DO95685 299 aa10.83□□□□□ -0.68
SF3B3-202ENST00000562722 NCK1P16333 377 aa10.83□□□□□ -0.68
SF3B3-202ENST00000562722 PMELP40967 661 aa10.83□□□□□ -0.68
SF3B3-202ENST00000562722 CDKN2AP42771 156 aaKnown RBP10.83□□□□□ -0.68
SF3B3-202ENST00000562722 RAD23AP54725 363 aa10.83□□□□□ -0.68
SF3B3-202ENST00000562722 RAG2P55895 527 aa10.83□□□□□ -0.68
SF3B3-202ENST00000562722 KCNMB1Q16558 191 aa10.83□□□□□ -0.68
SF3B3-202ENST00000562722 PRAMEF6Q5VXH4 476 aa10.83□□□□□ -0.68
SF3B3-202ENST00000562722 WDR25Q64LD2 544 aaPredicted RBP10.83□□□□□ -0.68
SF3B3-202ENST00000562722 RUSC1-AS1Q66K80 236 aa10.83□□□□□ -0.68
SF3B3-202ENST00000562722 FIP1L1Q6UN15 594 aaKnown RBP10.83□□□□□ -0.68
SF3B3-202ENST00000562722 LYPD2Q6UXB3 125 aa10.83□□□□□ -0.68
SF3B3-202ENST00000562722 DCDC5Q6ZRR9 648 aa10.83□□□□□ -0.68
SF3B3-202ENST00000562722 LINC00346Q8IVM7 164 aa10.83□□□□□ -0.68
SF3B3-202ENST00000562722 FITM2Q8N6M3 262 aa10.83□□□□□ -0.68
SF3B3-202ENST00000562722 KIR3DL3Q8N743 410 aa10.83□□□□□ -0.68
SF3B3-202ENST00000562722 OR4F5Q8NH21 305 aa10.83□□□□□ -0.68
SF3B3-202ENST00000562722 RP9Q8TA86 221 aaKnown RBP10.83□□□□□ -0.68
SF3B3-202ENST00000562722 SPRYD4Q8WW59 207 aaPredicted RBP10.83□□□□□ -0.68
SF3B3-202ENST00000562722 ERMAPQ96PL5 475 aaPredicted RBP10.83□□□□□ -0.68
SF3B3-202ENST00000562722 GPX7Q96SL4 187 aaPredicted RBP10.83□□□□□ -0.68
SF3B3-202ENST00000562722 PITX2Q99697 317 aa10.83□□□□□ -0.68
SF3B3-202ENST00000562722 SRA1Q9HD15 236 aaKnown RBP10.83□□□□□ -0.68
SF3B3-202ENST00000562722 TMCC3Q9ULS5 477 aa10.83□□□□□ -0.68
SF3B3-202ENST00000562722 A0A1B0GUS0 222 aa10.82□□□□□ -0.68
SF3B3-202ENST00000562722 A0A1W2PRQ8 180 aa10.82□□□□□ -0.68
SF3B3-202ENST00000562722 NME4O00746 187 aa10.82□□□□□ -0.68
SF3B3-202ENST00000562722 SLC22A2O15244 555 aa10.82□□□□□ -0.68
SF3B3-202ENST00000562722 FAM20BO75063 409 aa10.82□□□□□ -0.68
SF3B3-202ENST00000562722 RENP00797 406 aa10.82□□□□□ -0.68
SF3B3-202ENST00000562722 HLA-DQA2P01906 255 aa10.82□□□□□ -0.68
SF3B3-202ENST00000562722 LCATP04180 440 aa10.82□□□□□ -0.68
SF3B3-202ENST00000562722 OMPP47874 163 aa10.82□□□□□ -0.68
SF3B3-202ENST00000562722 GSK3BP49841 420 aa10.82□□□□□ -0.68
SF3B3-202ENST00000562722 DGCR6Q14129 220 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms