RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 GRB2P62993 217 aaKnown RBP11.5□□□□□ -0.57
CDH1-204ENST00000562118 POU4F2Q12837 409 aa11.5□□□□□ -0.57
CDH1-204ENST00000562118 DRAM2Q6UX65 266 aa11.5□□□□□ -0.57
CDH1-204ENST00000562118 USP51Q70EK9 711 aa11.5□□□□□ -0.57
CDH1-204ENST00000562118 LRP11Q86VZ4 500 aa11.5□□□□□ -0.57
CDH1-204ENST00000562118 OR1J1Q8NGS3 322 aa11.5□□□□□ -0.57
CDH1-204ENST00000562118 SLC25A40Q8TBP6 338 aa11.5□□□□□ -0.57
CDH1-204ENST00000562118 KLF14Q8TD94 323 aaPredicted RBP11.5□□□□□ -0.57
CDH1-204ENST00000562118 RFKQ969G6 155 aa11.5□□□□□ -0.57
CDH1-204ENST00000562118 APOBEC3DQ96AK3 386 aaPredicted RBP11.5□□□□□ -0.57
CDH1-204ENST00000562118 OTULINQ96BN8 352 aa11.5□□□□□ -0.57
CDH1-204ENST00000562118 CNN2Q99439 309 aaKnown RBP11.5□□□□□ -0.57
CDH1-204ENST00000562118 KCNJ15Q99712 375 aa11.5□□□□□ -0.57
CDH1-204ENST00000562118 CACNG6Q9BXT2 260 aa11.5□□□□□ -0.57
CDH1-204ENST00000562118 POFUT1Q9H488 388 aa11.5□□□□□ -0.57
CDH1-204ENST00000562118 MRPS18AQ9NVS2 196 aaKnown RBP11.5□□□□□ -0.57
CDH1-204ENST00000562118 CLN6Q9NWW5 311 aa11.5□□□□□ -0.57
CDH1-204ENST00000562118 EIF3KQ9UBQ5 218 aaKnown RBP11.5□□□□□ -0.57
CDH1-204ENST00000562118 COPS3Q9UNS2 423 aa11.5□□□□□ -0.57
CDH1-204ENST00000562118 GMPPBQ9Y5P6 360 aa11.5□□□□□ -0.57
CDH1-204ENST00000562118 CREBBPQ92793 2442 aa11.5□□□□□ -0.57
CDH1-204ENST00000562118 VSTM5A8MXK1 200 aa11.49□□□□□ -0.57
CDH1-204ENST00000562118 M0R135 149 aa11.49□□□□□ -0.57
CDH1-204ENST00000562118 ENTPD6O75354 484 aa11.49□□□□□ -0.57
CDH1-204ENST00000562118 WBP4O75554 376 aaKnown RBP11.49□□□□□ -0.57
CDH1-204ENST00000562118 IGHV4-39P01824 125 aa11.49□□□□□ -0.57
CDH1-204ENST00000562118 LYNP07948 512 aa11.49□□□□□ -0.57
CDH1-204ENST00000562118 NAA10P41227 235 aaPredicted RBP11.49□□□□□ -0.57
CDH1-204ENST00000562118 MMP15P51511 669 aa11.49□□□□□ -0.57
CDH1-204ENST00000562118 ISL1P61371 349 aa11.49□□□□□ -0.57
CDH1-204ENST00000562118 SNRPD2P62316 118 aaKnown RBP11.49□□□□□ -0.57
CDH1-204ENST00000562118 IL18R1Q13478 541 aa11.49□□□□□ -0.57
CDH1-204ENST00000562118 EIF2B1Q14232 305 aaKnown RBP11.49□□□□□ -0.57
CDH1-204ENST00000562118 LRRC36Q1X8D7 754 aa11.49□□□□□ -0.57
CDH1-204ENST00000562118 ZNF684Q5T5D7 378 aa11.49□□□□□ -0.57
CDH1-204ENST00000562118 TTC23Q5W5X9 447 aa11.49□□□□□ -0.57
CDH1-204ENST00000562118 VHLLQ6RSH7 139 aa11.49□□□□□ -0.57
CDH1-204ENST00000562118 GALNT4Q8N4A0 578 aa11.49□□□□□ -0.57
CDH1-204ENST00000562118 ABHD4Q8TB40 342 aa11.49□□□□□ -0.57
CDH1-204ENST00000562118 SYNPRQ8TBG9 265 aa11.49□□□□□ -0.57
CDH1-204ENST00000562118 ASB17Q8WXJ9 295 aa11.49□□□□□ -0.57
CDH1-204ENST00000562118 SPTSSAQ969W0 71 aa11.49□□□□□ -0.57
CDH1-204ENST00000562118 SPSB4Q96A44 273 aa11.49□□□□□ -0.57
CDH1-204ENST00000562118 ZNF799Q96GE5 643 aa11.49□□□□□ -0.57
CDH1-204ENST00000562118 OR2J1Q9GZK6 312 aa11.49□□□□□ -0.57
CDH1-204ENST00000562118 IMPAD1Q9NX62 359 aa11.49□□□□□ -0.57
CDH1-204ENST00000562118 DNAJC27Q9NZQ0 273 aa11.49□□□□□ -0.57
CDH1-204ENST00000562118 CGGBP1Q9UFW8 167 aaPredicted RBP11.49□□□□□ -0.57
CDH1-204ENST00000562118 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.49□□□□□ -0.57
CDH1-204ENST00000562118 STARD10Q9Y365 291 aa11.49□□□□□ -0.57
CDH1-204ENST00000562118 TMEM14AQ9Y6G1 99 aa11.49□□□□□ -0.57
CDH1-204ENST00000562118 HSPE1-MOB4S4R3N1 261 aa11.49□□□□□ -0.57
CDH1-204ENST00000562118 SRSF10O75494 262 aaKnown RBP11.48□□□□□ -0.57
CDH1-204ENST00000562118 CLPTM1O96005 669 aa11.48□□□□□ -0.57
CDH1-204ENST00000562118 RAC2P15153 192 aa11.48□□□□□ -0.57
CDH1-204ENST00000562118 CCNOP22674 350 aa11.48□□□□□ -0.57
CDH1-204ENST00000562118 CDKN1AP38936 164 aa11.48□□□□□ -0.57
CDH1-204ENST00000562118 MPV17P39210 176 aa11.48□□□□□ -0.57
CDH1-204ENST00000562118 SLC15A1P46059 708 aa11.48□□□□□ -0.57
CDH1-204ENST00000562118 TPTEP56180 551 aa11.48□□□□□ -0.57
CDH1-204ENST00000562118 KLF3P57682 345 aaPredicted RBP11.48□□□□□ -0.57
CDH1-204ENST00000562118 RPS7P62081 194 aaKnown RBP11.48□□□□□ -0.57
CDH1-204ENST00000562118 PSG7Q13046 419 aa11.48□□□□□ -0.57
CDH1-204ENST00000562118 MAD2L1BPQ15013 274 aaPredicted RBP11.48□□□□□ -0.57
CDH1-204ENST00000562118 ZNF718Q3SXZ3 478 aa11.48□□□□□ -0.57
CDH1-204ENST00000562118 TMEM154Q6P9G4 183 aa11.48□□□□□ -0.57
CDH1-204ENST00000562118 KRT74Q7RTS7 529 aa11.48□□□□□ -0.57
CDH1-204ENST00000562118 RFLNBQ8N5W9 214 aa11.48□□□□□ -0.57
CDH1-204ENST00000562118 TFAP2CQ92754 450 aa11.48□□□□□ -0.57
CDH1-204ENST00000562118 HAVCR1Q96D42 359 aa11.48□□□□□ -0.57
CDH1-204ENST00000562118 OR8B4Q96RC9 309 aa11.48□□□□□ -0.57
CDH1-204ENST00000562118 ADI1Q9BV57 179 aa11.48□□□□□ -0.57
CDH1-204ENST00000562118 NIPAL2Q9H841 368 aa11.48□□□□□ -0.57
CDH1-204ENST00000562118 SLCO1C1Q9NYB5 712 aa11.48□□□□□ -0.57
CDH1-204ENST00000562118 NKIRAS2Q9NYR9 191 aa11.48□□□□□ -0.57
CDH1-204ENST00000562118 EXOGQ9Y2C4 368 aaKnown RBP11.48□□□□□ -0.57
CDH1-204ENST00000562118 ZANQ9Y493 2812 aa11.48□□□□□ -0.57
CDH1-204ENST00000562118 F5H5K5 113 aa11.47□□□□□ -0.57
CDH1-204ENST00000562118 PHYHO14832 338 aa11.47□□□□□ -0.57
CDH1-204ENST00000562118 ZNF254O75437 659 aa11.47□□□□□ -0.57
CDH1-204ENST00000562118 ATP6V1G2O95670 118 aa11.47□□□□□ -0.57
CDH1-204ENST00000562118 IGLV3-1P01715 115 aa11.47□□□□□ -0.57
CDH1-204ENST00000562118 APOC1P02654 83 aa11.47□□□□□ -0.57
CDH1-204ENST00000562118 LCKP06239 509 aa11.47□□□□□ -0.57
CDH1-204ENST00000562118 OR2T7P0C7T2 308 aa11.47□□□□□ -0.57
CDH1-204ENST00000562118 BMP4P12644 408 aa11.47□□□□□ -0.57
CDH1-204ENST00000562118 CAPGP40121 348 aa11.47□□□□□ -0.57
CDH1-204ENST00000562118 MTNR1AP48039 350 aa11.47□□□□□ -0.57
CDH1-204ENST00000562118 ART1P52961 327 aa11.47□□□□□ -0.57
CDH1-204ENST00000562118 PSMA6P60900 246 aaKnown RBP11.47□□□□□ -0.57
CDH1-204ENST00000562118 EGR3Q06889 387 aa11.47□□□□□ -0.57
CDH1-204ENST00000562118 SNAI3Q3KNW1 292 aa11.47□□□□□ -0.57
CDH1-204ENST00000562118 SHEQ5VZ18 495 aa11.47□□□□□ -0.57
CDH1-204ENST00000562118 NAA40Q86UY6 237 aa11.47□□□□□ -0.57
CDH1-204ENST00000562118 EGFL6Q8IUX8 553 aa11.47□□□□□ -0.57
CDH1-204ENST00000562118 SLC35F2Q8IXU6 374 aa11.47□□□□□ -0.57
CDH1-204ENST00000562118 ZNF679Q8IYX0 411 aa11.47□□□□□ -0.57
CDH1-204ENST00000562118 ZNF555Q8NEP9 628 aa11.47□□□□□ -0.57
CDH1-204ENST00000562118 OR2T27Q8NH04 317 aa11.47□□□□□ -0.57
CDH1-204ENST00000562118 TRMT61AQ96FX7 289 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms