RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 SNAI3Q3KNW1 292 aa11.84□□□□□ -0.51
TPM1-230ENST00000561266 KLHL12Q53G59 568 aa11.84□□□□□ -0.51
TPM1-230ENST00000561266 CLEC2AQ6UVW9 174 aa11.84□□□□□ -0.51
TPM1-230ENST00000561266 CXXC5Q7LFL8 322 aaKnown RBP11.84□□□□□ -0.51
TPM1-230ENST00000561266 TCEANCQ8N8B7 351 aa11.84□□□□□ -0.51
TPM1-230ENST00000561266 OR6N2Q8NGY6 317 aa11.84□□□□□ -0.51
TPM1-230ENST00000561266 NEU4Q8WWR8 484 aaPredicted RBP11.84□□□□□ -0.51
TPM1-230ENST00000561266 UBE2FQ969M7 185 aa11.84□□□□□ -0.51
TPM1-230ENST00000561266 SLAMF6Q96DU3 332 aa11.84□□□□□ -0.51
TPM1-230ENST00000561266 INTS14Q96SY0 518 aa11.84□□□□□ -0.51
TPM1-230ENST00000561266 SLC29A1Q99808 456 aa11.84□□□□□ -0.51
TPM1-230ENST00000561266 C1QTNF5Q9BXJ0 243 aa11.84□□□□□ -0.51
TPM1-230ENST00000561266 MSL2Q9HCI7 577 aa11.84□□□□□ -0.51
TPM1-230ENST00000561266 DDX28Q9NUL7 540 aaKnown RBP11.84□□□□□ -0.51
TPM1-230ENST00000561266 PURGQ9UJV8 347 aaKnown RBP11.84□□□□□ -0.51
TPM1-230ENST00000561266 CACNG2Q9Y698 323 aa11.84□□□□□ -0.51
TPM1-230ENST00000561266 DYSFO75923 2080 aa11.83□□□□□ -0.51
TPM1-230ENST00000561266 ANK3Q12955 4377 aaKnown RBP11.83□□□□□ -0.52
TPM1-230ENST00000561266 PRR32B1ATL7 298 aa11.83□□□□□ -0.52
TPM1-230ENST00000561266 EI24O14681 340 aa11.83□□□□□ -0.52
TPM1-230ENST00000561266 SPRY3O43610 288 aa11.83□□□□□ -0.52
TPM1-230ENST00000561266 IGHV1-46P01743 117 aa11.83□□□□□ -0.52
TPM1-230ENST00000561266 ALPLP05186 524 aa11.83□□□□□ -0.52
TPM1-230ENST00000561266 SLC2A1P11166 492 aa11.83□□□□□ -0.52
TPM1-230ENST00000561266 GCH1P30793 250 aa11.83□□□□□ -0.52
TPM1-230ENST00000561266 NAA10P41227 235 aaPredicted RBP11.83□□□□□ -0.52
TPM1-230ENST00000561266 PDLIM4P50479 330 aa11.83□□□□□ -0.52
TPM1-230ENST00000561266 PRKXP51817 358 aa11.83□□□□□ -0.52
TPM1-230ENST00000561266 CCL8P80075 99 aa11.83□□□□□ -0.52
TPM1-230ENST00000561266 EIF2B1Q14232 305 aaKnown RBP11.83□□□□□ -0.52
TPM1-230ENST00000561266 TSTQ16762 297 aaKnown RBP11.83□□□□□ -0.52
TPM1-230ENST00000561266 ZFP1Q6P2D0 407 aa11.83□□□□□ -0.52
TPM1-230ENST00000561266 ZNF786Q8N393 782 aa11.83□□□□□ -0.52
TPM1-230ENST00000561266 UBASH3BQ8TF42 649 aa11.83□□□□□ -0.52
TPM1-230ENST00000561266 HAVCR1Q96D42 359 aa11.83□□□□□ -0.52
TPM1-230ENST00000561266 RAB3IPQ96QF0 476 aaPredicted RBP11.83□□□□□ -0.52
TPM1-230ENST00000561266 IL4I1Q96RQ9 567 aa11.83□□□□□ -0.52
TPM1-230ENST00000561266 DCLRE1CQ96SD1 692 aaKnown RBP11.83□□□□□ -0.52
TPM1-230ENST00000561266 TEAD3Q99594 435 aa11.83□□□□□ -0.52
TPM1-230ENST00000561266 ABHD6Q9BV23 337 aa11.83□□□□□ -0.52
TPM1-230ENST00000561266 GABARAPL3Q9BY60 117 aa11.83□□□□□ -0.52
TPM1-230ENST00000561266 MS4A5Q9H3V2 200 aa11.83□□□□□ -0.52
TPM1-230ENST00000561266 RIBC2Q9H4K1 309 aa11.83□□□□□ -0.52
TPM1-230ENST00000561266 CENPMQ9NSP4 180 aa11.83□□□□□ -0.52
TPM1-230ENST00000561266 SLCO1C1Q9NYB5 712 aa11.83□□□□□ -0.52
TPM1-230ENST00000561266 ZFHX3Q15911 3703 aa11.83□□□□□ -0.52
TPM1-230ENST00000561266 SETD2Q9BYW2 2564 aaPredicted RBP11.82□□□□□ -0.52
TPM1-230ENST00000561266 IGHV4-61A0A0C4DH41 118 aa11.82□□□□□ -0.52
TPM1-230ENST00000561266 WNT9BO14905 357 aa11.82□□□□□ -0.52
TPM1-230ENST00000561266 TLX2O43763 284 aaPredicted RBP11.82□□□□□ -0.52
TPM1-230ENST00000561266 RP2O75695 350 aa11.82□□□□□ -0.52
TPM1-230ENST00000561266 KITLGP21583 273 aa11.82□□□□□ -0.52
TPM1-230ENST00000561266 PAICSP22234 425 aaKnown RBP11.82□□□□□ -0.52
TPM1-230ENST00000561266 NR4A2P43354 598 aa11.82□□□□□ -0.52
TPM1-230ENST00000561266 RIN1Q13671 783 aa11.82□□□□□ -0.52
TPM1-230ENST00000561266 TRIP10Q15642 601 aa11.82□□□□□ -0.52
TPM1-230ENST00000561266 ZIK1Q3SY52 487 aaPredicted RBP11.82□□□□□ -0.52
TPM1-230ENST00000561266 AADACL4Q5VUY2 407 aa11.82□□□□□ -0.52
TPM1-230ENST00000561266 OR2T2Q6IF00 324 aa11.82□□□□□ -0.52
TPM1-230ENST00000561266 CLEC9AQ6UXN8 241 aa11.82□□□□□ -0.52
TPM1-230ENST00000561266 BIVMQ86UB2 503 aa11.82□□□□□ -0.52
TPM1-230ENST00000561266 OR5AS1Q8N127 324 aa11.82□□□□□ -0.52
TPM1-230ENST00000561266 CBR4Q8N4T8 237 aa11.82□□□□□ -0.52
TPM1-230ENST00000561266 RFLNBQ8N5W9 214 aa11.82□□□□□ -0.52
TPM1-230ENST00000561266 APOBEC3DQ96AK3 386 aaPredicted RBP11.82□□□□□ -0.52
TPM1-230ENST00000561266 PLEKHA8Q96JA3 519 aa11.82□□□□□ -0.52
TPM1-230ENST00000561266 SOX7Q9BT81 388 aa11.82□□□□□ -0.52
TPM1-230ENST00000561266 BPESC1Q9GZL8 116 aa11.82□□□□□ -0.52
TPM1-230ENST00000561266 DCAF16Q9NXF7 216 aa11.82□□□□□ -0.52
TPM1-230ENST00000561266 TREM2Q9NZC2 230 aa11.82□□□□□ -0.52
TPM1-230ENST00000561266 ZNF319Q9P2F9 582 aa11.82□□□□□ -0.52
TPM1-230ENST00000561266 COPS3Q9UNS2 423 aa11.82□□□□□ -0.52
TPM1-230ENST00000561266 LOC390937A0A1W2PQ73 354 aa11.81□□□□□ -0.52
TPM1-230ENST00000561266 H0YL77 283 aa11.81□□□□□ -0.52
TPM1-230ENST00000561266 H3BSA7 217 aa11.81□□□□□ -0.52
TPM1-230ENST00000561266 M0R135 149 aa11.81□□□□□ -0.52
TPM1-230ENST00000561266 PRODHO43272 600 aa11.81□□□□□ -0.52
TPM1-230ENST00000561266 CDC14BO60729 498 aa11.81□□□□□ -0.52
TPM1-230ENST00000561266 LCATP04180 440 aa11.81□□□□□ -0.52
TPM1-230ENST00000561266 MRPL3P09001 348 aaKnown RBP11.81□□□□□ -0.52
TPM1-230ENST00000561266 GIFP27352 417 aa11.81□□□□□ -0.52
TPM1-230ENST00000561266 ZNF81P51508 661 aa11.81□□□□□ -0.52
TPM1-230ENST00000561266 DSCR9P59020 149 aa11.81□□□□□ -0.52
TPM1-230ENST00000561266 SELENOVP59797 346 aa11.81□□□□□ -0.52
TPM1-230ENST00000561266 ECH1Q13011 328 aa11.81□□□□□ -0.52
TPM1-230ENST00000561266 ARL9Q6T311 187 aa11.81□□□□□ -0.52
TPM1-230ENST00000561266 FBXW12Q6X9E4 464 aa11.81□□□□□ -0.52
TPM1-230ENST00000561266 PRSS45Q7RTY3 260 aa11.81□□□□□ -0.52
TPM1-230ENST00000561266 PQLC1Q8N2U9 271 aa11.81□□□□□ -0.52
TPM1-230ENST00000561266 OR2AE1Q8NHA4 323 aa11.81□□□□□ -0.52
TPM1-230ENST00000561266 OTOSQ8NHW6 89 aa11.81□□□□□ -0.52
TPM1-230ENST00000561266 TMEM163Q8TC26 289 aa11.81□□□□□ -0.52
TPM1-230ENST00000561266 RNF133Q8WVZ7 376 aa11.81□□□□□ -0.52
TPM1-230ENST00000561266 ZNF799Q96GE5 643 aa11.81□□□□□ -0.52
TPM1-230ENST00000561266 MBOAT4Q96T53 435 aa11.81□□□□□ -0.52
TPM1-230ENST00000561266 RBM4BQ9BQ04 359 aaKnown RBP11.81□□□□□ -0.52
TPM1-230ENST00000561266 USE1Q9NZ43 259 aa11.81□□□□□ -0.52
TPM1-230ENST00000561266 AASSQ9UDR5 926 aa11.81□□□□□ -0.52
TPM1-230ENST00000561266 SONP18583 2426 aaKnown RBP11.81□□□□□ -0.52
TPM1-230ENST00000561266 NSD1Q96L73 2696 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms