RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 PLA2G12AQ9BZM1 189 aa13.62□□□□□ -0.23
SNX1-213ENST00000561026 MAGEL2Q9UJ55 1249 aa13.62□□□□□ -0.23
SNX1-213ENST00000561026 INSIG2Q9Y5U4 225 aa13.62□□□□□ -0.23
SNX1-213ENST00000561026 CEACAM18A8MTB9 384 aa13.61□□□□□ -0.23
SNX1-213ENST00000561026 IQCF6A8MYZ5 107 aa13.61□□□□□ -0.23
SNX1-213ENST00000561026 H0YL77 283 aa13.61□□□□□ -0.23
SNX1-213ENST00000561026 SNX3O60493 162 aa13.61□□□□□ -0.23
SNX1-213ENST00000561026 RENP00797 406 aa13.61□□□□□ -0.23
SNX1-213ENST00000561026 WNT2P09544 360 aa13.61□□□□□ -0.23
SNX1-213ENST00000561026 CPT2P23786 658 aa13.61□□□□□ -0.23
SNX1-213ENST00000561026 SRP9P49458 86 aaKnown RBP13.61□□□□□ -0.23
SNX1-213ENST00000561026 DBPQ10586 325 aaPredicted RBP13.61□□□□□ -0.23
SNX1-213ENST00000561026 ESCO2Q56NI9 601 aa13.61□□□□□ -0.23
SNX1-213ENST00000561026 SLC18B1Q6NT16 456 aa13.61□□□□□ -0.23
SNX1-213ENST00000561026 ZBTB46Q86UZ6 589 aa13.61□□□□□ -0.23
SNX1-213ENST00000561026 ZNF420Q8TAQ5 688 aaPredicted RBP13.61□□□□□ -0.23
SNX1-213ENST00000561026 MCUR1Q96AQ8 359 aa13.61□□□□□ -0.23
SNX1-213ENST00000561026 IFT27Q9BW83 186 aa13.61□□□□□ -0.23
SNX1-213ENST00000561026 C1QTNF5Q9BXJ0 243 aa13.61□□□□□ -0.23
SNX1-213ENST00000561026 WDR76Q9H967 626 aa13.61□□□□□ -0.23
SNX1-213ENST00000561026 TMEM165Q9HC07 324 aa13.61□□□□□ -0.23
SNX1-213ENST00000561026 RPRD1BQ9NQG5 326 aaKnown RBP13.61□□□□□ -0.23
SNX1-213ENST00000561026 NUP50Q9UKX7 468 aa13.61□□□□□ -0.23
SNX1-213ENST00000561026 A0A1B0GWJ7 208 aa13.6□□□□□ -0.23
SNX1-213ENST00000561026 MLNRO43193 412 aa13.6□□□□□ -0.23
SNX1-213ENST00000561026 IDH3BO43837 385 aa13.6□□□□□ -0.23
SNX1-213ENST00000561026 OR10H3O60404 316 aa13.6□□□□□ -0.23
SNX1-213ENST00000561026 NOS3P29474 1203 aa13.6□□□□□ -0.23
SNX1-213ENST00000561026 MSX2P35548 267 aaPredicted RBP13.6□□□□□ -0.23
SNX1-213ENST00000561026 IFNGR2P38484 337 aa13.6□□□□□ -0.23
SNX1-213ENST00000561026 GSSP48637 474 aa13.6□□□□□ -0.23
SNX1-213ENST00000561026 UBA52P62987 128 aaKnown RBP13.6□□□□□ -0.23
SNX1-213ENST00000561026 ECH1Q13011 328 aa13.6□□□□□ -0.23
SNX1-213ENST00000561026 SLC36A3Q495N2 470 aa13.6□□□□□ -0.23
SNX1-213ENST00000561026 ARMCX4Q5H9R4 360 aa13.6□□□□□ -0.23
SNX1-213ENST00000561026 KLF17Q5JT82 389 aaPredicted RBP13.6□□□□□ -0.23
SNX1-213ENST00000561026 RBMS3Q6XE24 437 aaKnown RBP13.6□□□□□ -0.23
SNX1-213ENST00000561026 CFAP77Q6ZQR2 320 aa13.6□□□□□ -0.23
SNX1-213ENST00000561026 LINC00346Q8IVM7 164 aa13.6□□□□□ -0.23
SNX1-213ENST00000561026 BHLHE23Q8NDY6 225 aa13.6□□□□□ -0.23
SNX1-213ENST00000561026 PITX2Q99697 317 aa13.6□□□□□ -0.23
SNX1-213ENST00000561026 MRI1Q9BV20 369 aa13.6□□□□□ -0.23
SNX1-213ENST00000561026 CDADC1Q9BWV3 514 aa13.6□□□□□ -0.23
SNX1-213ENST00000561026 HCAR1Q9BXC0 346 aa13.6□□□□□ -0.23
SNX1-213ENST00000561026 FAM107BQ9H098 131 aa13.6□□□□□ -0.23
SNX1-213ENST00000561026 DDX28Q9NUL7 540 aaKnown RBP13.6□□□□□ -0.23
SNX1-213ENST00000561026 TMEM100Q9NV29 134 aa13.6□□□□□ -0.23
SNX1-213ENST00000561026 CD300AQ9UGN4 299 aa13.6□□□□□ -0.23
SNX1-213ENST00000561026 CYB5R1Q9UHQ9 305 aa13.6□□□□□ -0.23
SNX1-213ENST00000561026 LRCH1Q9Y2L9 728 aa13.6□□□□□ -0.23
SNX1-213ENST00000561026 IGHV3-64DA0A0J9YX35 117 aa13.59□□□□□ -0.23
SNX1-213ENST00000561026 OR6C68A6NDL8 312 aa13.59□□□□□ -0.23
SNX1-213ENST00000561026 F5H5K5 113 aa13.59□□□□□ -0.23
SNX1-213ENST00000561026 F5H5P2 479 aa13.59□□□□□ -0.23
SNX1-213ENST00000561026 ZNF205O95201 554 aa13.59□□□□□ -0.23
SNX1-213ENST00000561026 FSTL3O95633 263 aa13.59□□□□□ -0.23
SNX1-213ENST00000561026 CYB5R3P00387 301 aaPredicted RBP13.59□□□□□ -0.23
SNX1-213ENST00000561026 FABP3P05413 133 aa13.59□□□□□ -0.23
SNX1-213ENST00000561026 ACSM4P0C7M7 580 aa13.59□□□□□ -0.23
SNX1-213ENST00000561026 SELEP16581 610 aa13.59□□□□□ -0.23
SNX1-213ENST00000561026 GGT2P36268 569 aa13.59□□□□□ -0.23
SNX1-213ENST00000561026 PAX8Q06710 450 aa13.59□□□□□ -0.23
SNX1-213ENST00000561026 ZNF181Q2M3W8 571 aa13.59□□□□□ -0.23
SNX1-213ENST00000561026 SAMD4BQ5PRF9 694 aaKnown RBP13.59□□□□□ -0.23
SNX1-213ENST00000561026 MOGAT3Q86VF5 341 aa13.59□□□□□ -0.23
SNX1-213ENST00000561026 PGAM4Q8N0Y7 254 aa13.59□□□□□ -0.23
SNX1-213ENST00000561026 SIGLECL1Q8N7X8 197 aa13.59□□□□□ -0.23
SNX1-213ENST00000561026 OR2AJ1Q8NGZ0 328 aa13.59□□□□□ -0.23
SNX1-213ENST00000561026 NSMCE2Q96MF7 247 aa13.59□□□□□ -0.23
SNX1-213ENST00000561026 CDRT15Q96T59 188 aa13.59□□□□□ -0.23
SNX1-213ENST00000561026 ATF6BQ99941 703 aa13.59□□□□□ -0.23
SNX1-213ENST00000561026 SSBP3Q9BWW4 388 aaPredicted RBP13.59□□□□□ -0.23
SNX1-213ENST00000561026 IL1RAPQ9NPH3 570 aa13.59□□□□□ -0.23
SNX1-213ENST00000561026 ZNF69Q9UC07 566 aa13.59□□□□□ -0.23
SNX1-213ENST00000561026 OR5V1Q9UGF6 321 aa13.59□□□□□ -0.23
SNX1-213ENST00000561026 TMCC3Q9ULS5 477 aa13.59□□□□□ -0.23
SNX1-213ENST00000561026 PPIAL4AQ9Y536 164 aa13.59□□□□□ -0.23
SNX1-213ENST00000561026 LRRC30A6NM36 301 aa13.58□□□□□ -0.23
SNX1-213ENST00000561026 ARPC2O15144 300 aa13.58□□□□□ -0.23
SNX1-213ENST00000561026 HLA-DQA2P01906 255 aa13.58□□□□□ -0.23
SNX1-213ENST00000561026 HLA-DPB1P04440 258 aa13.58□□□□□ -0.23
SNX1-213ENST00000561026 RRM2P31350 389 aa13.58□□□□□ -0.23
SNX1-213ENST00000561026 CD80P33681 288 aa13.58□□□□□ -0.23
SNX1-213ENST00000561026 PMELP40967 661 aa13.58□□□□□ -0.23
SNX1-213ENST00000561026 PAX2Q02962 417 aa13.58□□□□□ -0.23
SNX1-213ENST00000561026 TSPAN31Q12999 210 aa13.58□□□□□ -0.23
SNX1-213ENST00000561026 GK2Q14410 553 aaPredicted RBP13.58□□□□□ -0.23
SNX1-213ENST00000561026 ZNF620Q6ZNG0 422 aa13.58□□□□□ -0.23
SNX1-213ENST00000561026 DOK3Q7L591 496 aa13.58□□□□□ -0.23
SNX1-213ENST00000561026 NAA40Q86UY6 237 aa13.58□□□□□ -0.23
SNX1-213ENST00000561026 SDR9C7Q8NEX9 313 aa13.58□□□□□ -0.23
SNX1-213ENST00000561026 OR52E2Q8NGJ4 325 aa13.58□□□□□ -0.23
SNX1-213ENST00000561026 GNPDA2Q8TDQ7 276 aa13.58□□□□□ -0.23
SNX1-213ENST00000561026 ZMYND19Q96E35 227 aaPredicted RBP13.58□□□□□ -0.23
SNX1-213ENST00000561026 FN3KQ9H479 309 aa13.58□□□□□ -0.23
SNX1-213ENST00000561026 PNRC2Q9NPJ4 139 aaKnown RBP13.58□□□□□ -0.23
SNX1-213ENST00000561026 MIOXQ9UGB7 285 aa13.58□□□□□ -0.23
SNX1-213ENST00000561026 LCATP04180 440 aa13.58□□□□□ -0.24
SNX1-213ENST00000561026 RPS2P15880 293 aaKnown RBP13.58□□□□□ -0.24
SNX1-213ENST00000561026 GATA4P43694 442 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms