RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 C2CD3Q4AC94 2353 aa13.01□□□□□ -0.33
SNRPA1-213ENST00000560856 ZSCAN5BA6NJL1 495 aa13.01□□□□□ -0.33
SNRPA1-213ENST00000560856 SAC3D1A6NKF1 404 aa13.01□□□□□ -0.33
SNRPA1-213ENST00000560856 F5H5K5 113 aa13.01□□□□□ -0.33
SNRPA1-213ENST00000560856 NDUFS8O00217 210 aa13.01□□□□□ -0.33
SNRPA1-213ENST00000560856 ERCC1P07992 297 aaPredicted RBP13.01□□□□□ -0.33
SNRPA1-213ENST00000560856 SPARCP09486 303 aa13.01□□□□□ -0.33
SNRPA1-213ENST00000560856 PAICSP22234 425 aaKnown RBP13.01□□□□□ -0.33
SNRPA1-213ENST00000560856 COL8A2P25067 703 aa13.01□□□□□ -0.33
SNRPA1-213ENST00000560856 POLR2IP36954 125 aaKnown RBP13.01□□□□□ -0.33
SNRPA1-213ENST00000560856 NR4A2P43354 598 aa13.01□□□□□ -0.33
SNRPA1-213ENST00000560856 LOXL1Q08397 574 aaPredicted RBP13.01□□□□□ -0.33
SNRPA1-213ENST00000560856 RIN1Q13671 783 aa13.01□□□□□ -0.33
SNRPA1-213ENST00000560856 SNAPC1Q16533 368 aa13.01□□□□□ -0.33
SNRPA1-213ENST00000560856 C12orf73Q69YU5 71 aa13.01□□□□□ -0.33
SNRPA1-213ENST00000560856 CLEC9AQ6UXN8 241 aa13.01□□□□□ -0.33
SNRPA1-213ENST00000560856 FBXW12Q6X9E4 464 aa13.01□□□□□ -0.33
SNRPA1-213ENST00000560856 DPY19L4Q7Z388 723 aa13.01□□□□□ -0.33
SNRPA1-213ENST00000560856 APOBEC3DQ96AK3 386 aaPredicted RBP13.01□□□□□ -0.33
SNRPA1-213ENST00000560856 OTULINQ96BN8 352 aa13.01□□□□□ -0.33
SNRPA1-213ENST00000560856 ZMYND19Q96E35 227 aaPredicted RBP13.01□□□□□ -0.33
SNRPA1-213ENST00000560856 PURGQ9UJV8 347 aaKnown RBP13.01□□□□□ -0.33
SNRPA1-213ENST00000560856 SONP18583 2426 aaKnown RBP13.01□□□□□ -0.33
SNRPA1-213ENST00000560856 HIVEP2P31629 2446 aa13.01□□□□□ -0.33
SNRPA1-213ENST00000560856 NF1P21359 2839 aa13□□□□□ -0.33
SNRPA1-213ENST00000560856 C5orf63A6NC05 138 aa13□□□□□ -0.33
SNRPA1-213ENST00000560856 CCDC182A6NF36 153 aa13□□□□□ -0.33
SNRPA1-213ENST00000560856 PRODHO43272 600 aa13□□□□□ -0.33
SNRPA1-213ENST00000560856 PRKYO43930 277 aa13□□□□□ -0.33
SNRPA1-213ENST00000560856 RP2O75695 350 aa13□□□□□ -0.33
SNRPA1-213ENST00000560856 IGHV1-46P01743 117 aa13□□□□□ -0.33
SNRPA1-213ENST00000560856 HEXAP06865 529 aa13□□□□□ -0.33
SNRPA1-213ENST00000560856 ADH4P08319 380 aa13□□□□□ -0.33
SNRPA1-213ENST00000560856 RAC2P15153 192 aa13□□□□□ -0.33
SNRPA1-213ENST00000560856 HLXQ14774 488 aaPredicted RBP13□□□□□ -0.33
SNRPA1-213ENST00000560856 Q6ZR03 302 aa13□□□□□ -0.33
SNRPA1-213ENST00000560856 CXXC5Q7LFL8 322 aaKnown RBP13□□□□□ -0.33
SNRPA1-213ENST00000560856 ERI1Q8IV48 349 aaKnown RBP13□□□□□ -0.33
SNRPA1-213ENST00000560856 SNX33Q8WV41 574 aa13□□□□□ -0.33
SNRPA1-213ENST00000560856 YIPF5Q969M3 257 aa13□□□□□ -0.33
SNRPA1-213ENST00000560856 SLAMF6Q96DU3 332 aa13□□□□□ -0.33
SNRPA1-213ENST00000560856 COG8Q96MW5 612 aa13□□□□□ -0.33
SNRPA1-213ENST00000560856 RAB3IPQ96QF0 476 aaPredicted RBP13□□□□□ -0.33
SNRPA1-213ENST00000560856 INTS14Q96SY0 518 aa13□□□□□ -0.33
SNRPA1-213ENST00000560856 AMELYQ99218 206 aa13□□□□□ -0.33
SNRPA1-213ENST00000560856 ABHD6Q9BV23 337 aa13□□□□□ -0.33
SNRPA1-213ENST00000560856 GABARAPL3Q9BY60 117 aa13□□□□□ -0.33
SNRPA1-213ENST00000560856 S100A14Q9HCY8 104 aa13□□□□□ -0.33
SNRPA1-213ENST00000560856 E9PQ18 207 aa12.99□□□□□ -0.33
SNRPA1-213ENST00000560856 M0R129 80 aa12.99□□□□□ -0.33
SNRPA1-213ENST00000560856 M0R135 149 aa12.99□□□□□ -0.33
SNRPA1-213ENST00000560856 IGFBP5P24593 272 aa12.99□□□□□ -0.33
SNRPA1-213ENST00000560856 ZNF81P51508 661 aa12.99□□□□□ -0.33
SNRPA1-213ENST00000560856 TPTEP56180 551 aa12.99□□□□□ -0.33
SNRPA1-213ENST00000560856 CCL8P80075 99 aa12.99□□□□□ -0.33
SNRPA1-213ENST00000560856 MRPS11P82912 194 aaKnown RBP12.99□□□□□ -0.33
SNRPA1-213ENST00000560856 CDK5R2Q13319 367 aa12.99□□□□□ -0.33
SNRPA1-213ENST00000560856 CARTPTQ16568 116 aa12.99□□□□□ -0.33
SNRPA1-213ENST00000560856 PCGF3Q3KNV8 242 aa12.99□□□□□ -0.33
SNRPA1-213ENST00000560856 KLHL12Q53G59 568 aa12.99□□□□□ -0.33
SNRPA1-213ENST00000560856 SPRNQ5BIV9 151 aa12.99□□□□□ -0.33
SNRPA1-213ENST00000560856 SLC35D3Q5M8T2 416 aa12.99□□□□□ -0.33
SNRPA1-213ENST00000560856 Q71RC1 249 aaPredicted RBP12.99□□□□□ -0.33
SNRPA1-213ENST00000560856 OR5L1Q8NGL2 311 aa12.99□□□□□ -0.33
SNRPA1-213ENST00000560856 OR6N2Q8NGY6 317 aa12.99□□□□□ -0.33
SNRPA1-213ENST00000560856 RNF133Q8WVZ7 376 aa12.99□□□□□ -0.33
SNRPA1-213ENST00000560856 RDH5Q92781 318 aa12.99□□□□□ -0.33
SNRPA1-213ENST00000560856 ZNF799Q96GE5 643 aa12.99□□□□□ -0.33
SNRPA1-213ENST00000560856 PLEKHA8Q96JA3 519 aa12.99□□□□□ -0.33
SNRPA1-213ENST00000560856 TEAD3Q99594 435 aa12.99□□□□□ -0.33
SNRPA1-213ENST00000560856 PIMREGQ9BSJ6 248 aa12.99□□□□□ -0.33
SNRPA1-213ENST00000560856 TEX12Q9BXU0 123 aa12.99□□□□□ -0.33
SNRPA1-213ENST00000560856 BPESC1Q9GZL8 116 aa12.99□□□□□ -0.33
SNRPA1-213ENST00000560856 MSL2Q9HCI7 577 aa12.99□□□□□ -0.33
SNRPA1-213ENST00000560856 PTTG3PQ9NZH4 202 aa12.99□□□□□ -0.33
SNRPA1-213ENST00000560856 IGHV4-61A0A0C4DH41 118 aa12.98□□□□□ -0.33
SNRPA1-213ENST00000560856 SELENOFO60613 162 aa12.98□□□□□ -0.33
SNRPA1-213ENST00000560856 LILRA1O75019 489 aa12.98□□□□□ -0.33
SNRPA1-213ENST00000560856 ALPLP05186 524 aa12.98□□□□□ -0.33
SNRPA1-213ENST00000560856 USF1P22415 310 aaPredicted RBP12.98□□□□□ -0.33
SNRPA1-213ENST00000560856 LIPAP38571 399 aa12.98□□□□□ -0.33
SNRPA1-213ENST00000560856 APOFQ13790 326 aa12.98□□□□□ -0.33
SNRPA1-213ENST00000560856 EIF2B1Q14232 305 aaKnown RBP12.98□□□□□ -0.33
SNRPA1-213ENST00000560856 FAM209AQ5JX71 171 aa12.98□□□□□ -0.33
SNRPA1-213ENST00000560856 AADACL4Q5VUY2 407 aa12.98□□□□□ -0.33
SNRPA1-213ENST00000560856 SHFQ7M4L6 423 aa12.98□□□□□ -0.33
SNRPA1-213ENST00000560856 BCDIN3DQ7Z5W3 292 aaKnown RBP12.98□□□□□ -0.33
SNRPA1-213ENST00000560856 C10orf67Q8IYJ2 551 aa12.98□□□□□ -0.33
SNRPA1-213ENST00000560856 OTOSQ8NHW6 89 aa12.98□□□□□ -0.33
SNRPA1-213ENST00000560856 SPTSSAQ969W0 71 aa12.98□□□□□ -0.33
SNRPA1-213ENST00000560856 KCNJ15Q99712 375 aa12.98□□□□□ -0.33
SNRPA1-213ENST00000560856 RBM4BQ9BQ04 359 aaKnown RBP12.98□□□□□ -0.33
SNRPA1-213ENST00000560856 CYSLTR2Q9NS75 346 aa12.98□□□□□ -0.33
SNRPA1-213ENST00000560856 CENPMQ9NSP4 180 aa12.98□□□□□ -0.33
SNRPA1-213ENST00000560856 USE1Q9NZ43 259 aa12.98□□□□□ -0.33
SNRPA1-213ENST00000560856 CGGBP1Q9UFW8 167 aaPredicted RBP12.98□□□□□ -0.33
SNRPA1-213ENST00000560856 KLHDC2Q9Y2U9 406 aa12.98□□□□□ -0.33
SNRPA1-213ENST00000560856 NAV3Q8IVL0 2385 aa12.97□□□□□ -0.33
SNRPA1-213ENST00000560856 A0A1B0GWJ7 208 aa12.97□□□□□ -0.33
SNRPA1-213ENST00000560856 ZNF878C9JN71 531 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms