RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 TRA2BP62995 288 aaKnown RBP5.03□□□□□ -1.6
HERC1-208ENST00000560462 FRG1Q14331 258 aaKnown RBP5.03□□□□□ -1.6
HERC1-208ENST00000560462 PTGR1Q14914 329 aa5.03□□□□□ -1.6
HERC1-208ENST00000560462 TBC1D28Q2M2D7 210 aa5.03□□□□□ -1.6
HERC1-208ENST00000560462 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.03□□□□□ -1.6
HERC1-208ENST00000560462 LIPJQ5W064 366 aa5.03□□□□□ -1.6
HERC1-208ENST00000560462 ZNF770Q6IQ21 691 aaPredicted RBP5.03□□□□□ -1.6
HERC1-208ENST00000560462 GLDNQ6ZMI3 551 aaPredicted RBP5.03□□□□□ -1.6
HERC1-208ENST00000560462 BTN2A1Q7KYR7 527 aa5.03□□□□□ -1.6
HERC1-208ENST00000560462 ZNF551Q7Z340 670 aaPredicted RBP5.03□□□□□ -1.6
HERC1-208ENST00000560462 EPHX4Q8IUS5 362 aa5.03□□□□□ -1.6
HERC1-208ENST00000560462 LINC00346Q8IVM7 164 aa5.03□□□□□ -1.6
HERC1-208ENST00000560462 SGPP2Q8IWX5 399 aa5.03□□□□□ -1.6
HERC1-208ENST00000560462 METTL4Q8N3J2 472 aa5.03□□□□□ -1.6
HERC1-208ENST00000560462 ZNF614Q8N883 585 aa5.03□□□□□ -1.6
HERC1-208ENST00000560462 ZNF420Q8TAQ5 688 aaPredicted RBP5.03□□□□□ -1.6
HERC1-208ENST00000560462 KLF14Q8TD94 323 aaPredicted RBP5.03□□□□□ -1.6
HERC1-208ENST00000560462 DDIT4LQ96D03 193 aa5.03□□□□□ -1.6
HERC1-208ENST00000560462 FYTTD1Q96QD9 318 aaKnown RBP5.03□□□□□ -1.6
HERC1-208ENST00000560462 OR2V2Q96R30 315 aa5.03□□□□□ -1.6
HERC1-208ENST00000560462 THAP7Q9BT49 309 aaPredicted RBP5.03□□□□□ -1.6
HERC1-208ENST00000560462 HOXD1Q9GZZ0 328 aa5.03□□□□□ -1.6
HERC1-208ENST00000560462 LRMDAQ9H2I8 198 aa5.03□□□□□ -1.6
HERC1-208ENST00000560462 C1orf198Q9H425 327 aa5.03□□□□□ -1.6
HERC1-208ENST00000560462 PPP1R3EQ9H7J1 279 aa5.03□□□□□ -1.6
HERC1-208ENST00000560462 TCF7L2Q9NQB0 619 aa5.03□□□□□ -1.6
HERC1-208ENST00000560462 DUSP22Q9NRW4 184 aa5.03□□□□□ -1.6
HERC1-208ENST00000560462 SNTG1Q9NSN8 517 aa5.03□□□□□ -1.6
HERC1-208ENST00000560462 GIN1Q9NXP7 522 aa5.03□□□□□ -1.6
HERC1-208ENST00000560462 CD274Q9NZQ7 290 aa5.03□□□□□ -1.6
HERC1-208ENST00000560462 OPTCQ9UBM4 332 aa5.03□□□□□ -1.6
HERC1-208ENST00000560462 CTSZQ9UBR2 303 aa5.03□□□□□ -1.6
HERC1-208ENST00000560462 TCF19Q9Y242 345 aa5.03□□□□□ -1.6
HERC1-208ENST00000560462 LOC100509620A0A075B734 347 aa5.02□□□□□ -1.61
HERC1-208ENST00000560462 IGLV1-36A0A0B4J1U3 117 aa5.02□□□□□ -1.61
HERC1-208ENST00000560462 MAGEB16A2A368 324 aa5.02□□□□□ -1.61
HERC1-208ENST00000560462 LRRC30A6NM36 301 aa5.02□□□□□ -1.61
HERC1-208ENST00000560462 TIMM8AO60220 97 aaPredicted RBP5.02□□□□□ -1.61
HERC1-208ENST00000560462 FCMRO60667 390 aa5.02□□□□□ -1.61
HERC1-208ENST00000560462 SEC31AO94979 1220 aaKnown RBP5.02□□□□□ -1.61
HERC1-208ENST00000560462 VAMP5O95183 116 aa5.02□□□□□ -1.61
HERC1-208ENST00000560462 SPDEFO95238 335 aa5.02□□□□□ -1.61
HERC1-208ENST00000560462 ECDO95905 644 aaPredicted RBP5.02□□□□□ -1.61
HERC1-208ENST00000560462 FGGP02679 453 aa5.02□□□□□ -1.61
HERC1-208ENST00000560462 GPIP06744 558 aa5.02□□□□□ -1.61
HERC1-208ENST00000560462 NPSP0C0P6 89 aa5.02□□□□□ -1.61
HERC1-208ENST00000560462 PATE4P0C8F1 98 aa5.02□□□□□ -1.61
HERC1-208ENST00000560462 ATP6V1C1P21283 382 aa5.02□□□□□ -1.61
HERC1-208ENST00000560462 PMELP40967 661 aa5.02□□□□□ -1.61
HERC1-208ENST00000560462 MAP3K8P41279 467 aa5.02□□□□□ -1.61
HERC1-208ENST00000560462 ZNF84P51523 738 aa5.02□□□□□ -1.61
HERC1-208ENST00000560462 MFAP4P55083 255 aa5.02□□□□□ -1.61
HERC1-208ENST00000560462 KCTD19Q17RG1 926 aaPredicted RBP5.02□□□□□ -1.61
HERC1-208ENST00000560462 MTX3Q5HYI7 312 aa5.02□□□□□ -1.61
HERC1-208ENST00000560462 FAM201AQ5SY85 155 aa5.02□□□□□ -1.61
HERC1-208ENST00000560462 COLCA1Q6ZS62 124 aa5.02□□□□□ -1.61
HERC1-208ENST00000560462 ZNF695Q8IW36 515 aa5.02□□□□□ -1.61
HERC1-208ENST00000560462 C1orf87Q8N0U7 546 aa5.02□□□□□ -1.61
HERC1-208ENST00000560462 COX18Q8N8Q8 333 aa5.02□□□□□ -1.61
HERC1-208ENST00000560462 CDRT4Q8N9R6 151 aa5.02□□□□□ -1.61
HERC1-208ENST00000560462 DNAAF1Q8NEP3 725 aa5.02□□□□□ -1.61
HERC1-208ENST00000560462 OR1J2Q8NGS2 313 aa5.02□□□□□ -1.61
HERC1-208ENST00000560462 RAB3IPQ96QF0 476 aaPredicted RBP5.02□□□□□ -1.61
HERC1-208ENST00000560462 ABHD1Q96SE0 405 aa5.02□□□□□ -1.61
HERC1-208ENST00000560462 ELOVL6Q9H5J4 265 aa5.02□□□□□ -1.61
HERC1-208ENST00000560462 LZTFL1Q9NQ48 299 aa5.02□□□□□ -1.61
HERC1-208ENST00000560462 FBXL17Q9UF56 701 aa5.02□□□□□ -1.61
HERC1-208ENST00000560462 PITPNC1Q9UKF7 332 aa5.02□□□□□ -1.61
HERC1-208ENST00000560462 DHDHQ9UQ10 334 aa5.02□□□□□ -1.61
HERC1-208ENST00000560462 hCG_1809904A0A1W2PP81 198 aa5.01□□□□□ -1.61
HERC1-208ENST00000560462 A0A1W2PPE2 198 aa5.01□□□□□ -1.61
HERC1-208ENST00000560462 A0A1W2PR64 198 aa5.01□□□□□ -1.61
HERC1-208ENST00000560462 TCRBV7S3A2A0A539 114 aa5.01□□□□□ -1.61
HERC1-208ENST00000560462 ELOVL7A1L3X0 281 aa5.01□□□□□ -1.61
HERC1-208ENST00000560462 A6NDX4 124 aa5.01□□□□□ -1.61
HERC1-208ENST00000560462 NPIPB6E9PJ23 425 aa5.01□□□□□ -1.61
HERC1-208ENST00000560462 K7EPI3 171 aa5.01□□□□□ -1.61
HERC1-208ENST00000560462 M0R3G1 203 aa5.01□□□□□ -1.61
HERC1-208ENST00000560462 ENO1P06733 434 aaKnown RBP5.01□□□□□ -1.61
HERC1-208ENST00000560462 IL3P08700 152 aa5.01□□□□□ -1.61
HERC1-208ENST00000560462 PRPS2P11908 318 aa5.01□□□□□ -1.61
HERC1-208ENST00000560462 TMEM11P17152 192 aa5.01□□□□□ -1.61
HERC1-208ENST00000560462 CDAP32320 146 aa5.01□□□□□ -1.61
HERC1-208ENST00000560462 POU3F4P49335 361 aa5.01□□□□□ -1.61
HERC1-208ENST00000560462 AQP5P55064 265 aa5.01□□□□□ -1.61
HERC1-208ENST00000560462 CLDN17P56750 224 aa5.01□□□□□ -1.61
HERC1-208ENST00000560462 SKP2Q13309 424 aa5.01□□□□□ -1.61
HERC1-208ENST00000560462 CEACAM7Q14002 265 aa5.01□□□□□ -1.61
HERC1-208ENST00000560462 OR7A5Q15622 319 aa5.01□□□□□ -1.61
HERC1-208ENST00000560462 NCR3LG1Q68D85 454 aa5.01□□□□□ -1.61
HERC1-208ENST00000560462 C4orf22Q6V702 233 aa5.01□□□□□ -1.61
HERC1-208ENST00000560462 ZNF627Q7L945 461 aa5.01□□□□□ -1.61
HERC1-208ENST00000560462 GRINAQ7Z429 371 aa5.01□□□□□ -1.61
HERC1-208ENST00000560462 ZER1Q7Z7L7 766 aa5.01□□□□□ -1.61
HERC1-208ENST00000560462 LYPD6Q86Y78 171 aa5.01□□□□□ -1.61
HERC1-208ENST00000560462 ZNF645Q8N7E2 425 aa5.01□□□□□ -1.61
HERC1-208ENST00000560462 ZNF563Q8TA94 476 aa5.01□□□□□ -1.61
HERC1-208ENST00000560462 SLC25A40Q8TBP6 338 aa5.01□□□□□ -1.61
HERC1-208ENST00000560462 Q8TCH9 128 aa5.01□□□□□ -1.61
HERC1-208ENST00000560462 TMEM170AQ8WVE7 144 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms