RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 ARPC3O15145 178 aa10.6□□□□□ -0.71
SNX1-209ENST00000559961 AVPP01185 164 aa10.6□□□□□ -0.71
SNX1-209ENST00000559961 DBHP09172 617 aa10.6□□□□□ -0.71
SNX1-209ENST00000559961 ZNF26P17031 533 aaPredicted RBP10.6□□□□□ -0.71
SNX1-209ENST00000559961 MTNR1AP48039 350 aa10.6□□□□□ -0.71
SNX1-209ENST00000559961 SLC6A9P48067 706 aa10.6□□□□□ -0.71
SNX1-209ENST00000559961 GNB2P62879 340 aa10.6□□□□□ -0.71
SNX1-209ENST00000559961 MZT1Q08AG7 82 aa10.6□□□□□ -0.71
SNX1-209ENST00000559961 ZNF154Q13106 437 aa10.6□□□□□ -0.71
SNX1-209ENST00000559961 SEC23BQ15437 767 aa10.6□□□□□ -0.71
SNX1-209ENST00000559961 KCNJ8Q15842 424 aa10.6□□□□□ -0.71
SNX1-209ENST00000559961 SPATS1Q496A3 300 aa10.6□□□□□ -0.71
SNX1-209ENST00000559961 LRRN1Q6UXK5 716 aa10.6□□□□□ -0.71
SNX1-209ENST00000559961 PTCHD4Q6ZW05 846 aa10.6□□□□□ -0.71
SNX1-209ENST00000559961 PGAP1Q75T13 922 aa10.6□□□□□ -0.71
SNX1-209ENST00000559961 MRPL21Q7Z2W9 205 aaKnown RBP10.6□□□□□ -0.71
SNX1-209ENST00000559961 BHLHE23Q8NDY6 225 aa10.6□□□□□ -0.71
SNX1-209ENST00000559961 PROKR2Q8NFJ6 384 aa10.6□□□□□ -0.71
SNX1-209ENST00000559961 OR8B3Q8NGG8 313 aa10.6□□□□□ -0.71
SNX1-209ENST00000559961 C22orf15Q8WYQ4 148 aa10.6□□□□□ -0.71
SNX1-209ENST00000559961 ERGIC1Q969X5 290 aa10.6□□□□□ -0.71
SNX1-209ENST00000559961 OR8B2Q96RD0 313 aa10.6□□□□□ -0.71
SNX1-209ENST00000559961 CDRT15Q96T59 188 aa10.6□□□□□ -0.71
SNX1-209ENST00000559961 ATF6BQ99941 703 aa10.6□□□□□ -0.71
SNX1-209ENST00000559961 SSBP3Q9BWW4 388 aaPredicted RBP10.6□□□□□ -0.71
SNX1-209ENST00000559961 POFUT1Q9H488 388 aa10.6□□□□□ -0.71
SNX1-209ENST00000559961 CUBNO60494 3623 aa10.59□□□□□ -0.71
SNX1-209ENST00000559961 IQCF6A8MYZ5 107 aa10.59□□□□□ -0.71
SNX1-209ENST00000559961 DCTN3O75935 186 aa10.59□□□□□ -0.71
SNX1-209ENST00000559961 HSD17B1P14061 328 aa10.59□□□□□ -0.71
SNX1-209ENST00000559961 HIST1H1CP16403 213 aaKnown RBP10.59□□□□□ -0.71
SNX1-209ENST00000559961 ZFP36P26651 326 aaKnown RBP10.59□□□□□ -0.71
SNX1-209ENST00000559961 GGT2P36268 569 aa10.59□□□□□ -0.71
SNX1-209ENST00000559961 COMPP49747 757 aaPredicted RBP10.59□□□□□ -0.71
SNX1-209ENST00000559961 COX10Q12887 443 aa10.59□□□□□ -0.71
SNX1-209ENST00000559961 FOXL1Q12952 345 aa10.59□□□□□ -0.71
SNX1-209ENST00000559961 BAMBIQ13145 260 aa10.59□□□□□ -0.71
SNX1-209ENST00000559961 ZMYND11Q15326 602 aa10.59□□□□□ -0.71
SNX1-209ENST00000559961 MEP1BQ16820 701 aa10.59□□□□□ -0.71
SNX1-209ENST00000559961 OTPQ5XKR4 325 aa10.59□□□□□ -0.71
SNX1-209ENST00000559961 CORO6Q6QEF8 472 aa10.59□□□□□ -0.71
SNX1-209ENST00000559961 Q6ZR03 302 aa10.59□□□□□ -0.71
SNX1-209ENST00000559961 C1orf229Q6ZS94 237 aaPredicted RBP10.59□□□□□ -0.71
SNX1-209ENST00000559961 PGAM4Q8N0Y7 254 aa10.59□□□□□ -0.71
SNX1-209ENST00000559961 OR10AD1Q8NGE0 317 aa10.59□□□□□ -0.71
SNX1-209ENST00000559961 OR52E2Q8NGJ4 325 aa10.59□□□□□ -0.71
SNX1-209ENST00000559961 OR2T4Q8NH00 348 aa10.59□□□□□ -0.71
SNX1-209ENST00000559961 SLC25A28Q96A46 364 aa10.59□□□□□ -0.71
SNX1-209ENST00000559961 NEIL1Q96FI4 390 aaPredicted RBP10.59□□□□□ -0.71
SNX1-209ENST00000559961 MEGF10Q96KG7 1140 aa10.59□□□□□ -0.71
SNX1-209ENST00000559961 DHRS1Q96LJ7 313 aa10.59□□□□□ -0.71
SNX1-209ENST00000559961 TSSK2Q96PF2 358 aa10.59□□□□□ -0.71
SNX1-209ENST00000559961 MYLK2Q9H1R3 596 aa10.59□□□□□ -0.71
SNX1-209ENST00000559961 TAGLN3Q9UI15 199 aa10.59□□□□□ -0.71
SNX1-209ENST00000559961 POLR3KQ9Y2Y1 108 aaPredicted RBP10.59□□□□□ -0.71
SNX1-209ENST00000559961 PPIAL4AQ9Y536 164 aa10.59□□□□□ -0.71
SNX1-209ENST00000559961 INSIG2Q9Y5U4 225 aa10.59□□□□□ -0.71
SNX1-209ENST00000559961 LHFPL6Q9Y693 200 aa10.59□□□□□ -0.71
SNX1-209ENST00000559961 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.58□□□□□ -0.72
SNX1-209ENST00000559961 GGT3PA6NGU5 568 aa10.58□□□□□ -0.72
SNX1-209ENST00000559961 CEACAM18A8MTB9 384 aa10.58□□□□□ -0.72
SNX1-209ENST00000559961 SNX3O60493 162 aa10.58□□□□□ -0.72
SNX1-209ENST00000559961 CYB5R3P00387 301 aaPredicted RBP10.58□□□□□ -0.72
SNX1-209ENST00000559961 ZNF12P17014 697 aa10.58□□□□□ -0.72
SNX1-209ENST00000559961 MMP16P51512 607 aa10.58□□□□□ -0.72
SNX1-209ENST00000559961 HIST1H3AP68431 136 aa10.58□□□□□ -0.72
SNX1-209ENST00000559961 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.58□□□□□ -0.72
SNX1-209ENST00000559961 TRAP1Q12931 704 aaKnown RBP10.58□□□□□ -0.72
SNX1-209ENST00000559961 TSPAN31Q12999 210 aa10.58□□□□□ -0.72
SNX1-209ENST00000559961 OR8G1Q15617 311 aa10.58□□□□□ -0.72
SNX1-209ENST00000559961 TMEM255AQ5JRV8 349 aa10.58□□□□□ -0.72
SNX1-209ENST00000559961 SLC35F1Q5T1Q4 408 aa10.58□□□□□ -0.72
SNX1-209ENST00000559961 HIST2H3PS2Q5TEC6 136 aa10.58□□□□□ -0.72
SNX1-209ENST00000559961 HIST2H3AQ71DI3 136 aa10.58□□□□□ -0.72
SNX1-209ENST00000559961 MOGAT3Q86VF5 341 aa10.58□□□□□ -0.72
SNX1-209ENST00000559961 LINC00346Q8IVM7 164 aa10.58□□□□□ -0.72
SNX1-209ENST00000559961 ZDHHC21Q8IVQ6 265 aa10.58□□□□□ -0.72
SNX1-209ENST00000559961 OR6V1Q8N148 313 aa10.58□□□□□ -0.72
SNX1-209ENST00000559961 CELF2-AS1Q8N7Q2 184 aa10.58□□□□□ -0.72
SNX1-209ENST00000559961 SLC26A10Q8NG04 563 aa10.58□□□□□ -0.72
SNX1-209ENST00000559961 SLCO4A1Q96BD0 722 aa10.58□□□□□ -0.72
SNX1-209ENST00000559961 SLC30A2Q9BRI3 323 aa10.58□□□□□ -0.72
SNX1-209ENST00000559961 C1QTNF5Q9BXJ0 243 aa10.58□□□□□ -0.72
SNX1-209ENST00000559961 SP140LQ9H930 580 aa10.58□□□□□ -0.72
SNX1-209ENST00000559961 FN3KRPQ9HA64 309 aa10.58□□□□□ -0.72
SNX1-209ENST00000559961 IL1RAPQ9NPH3 570 aa10.58□□□□□ -0.72
SNX1-209ENST00000559961 TRIM36Q9NQ86 728 aa10.58□□□□□ -0.72
SNX1-209ENST00000559961 OPN4Q9UHM6 478 aa10.58□□□□□ -0.72
SNX1-209ENST00000559961 ARL2BPQ9Y2Y0 163 aa10.58□□□□□ -0.72
SNX1-209ENST00000559961 IGLV1-36A0A0B4J1U3 117 aa10.57□□□□□ -0.72
SNX1-209ENST00000559961 A8MXK9 166 aa10.57□□□□□ -0.72
SNX1-209ENST00000559961 F5H5P2 479 aa10.57□□□□□ -0.72
SNX1-209ENST00000559961 M0R135 149 aa10.57□□□□□ -0.72
SNX1-209ENST00000559961 TNFRSF11BO00300 401 aa10.57□□□□□ -0.72
SNX1-209ENST00000559961 ARPC2O15144 300 aa10.57□□□□□ -0.72
SNX1-209ENST00000559961 GPANK1O95872 356 aa10.57□□□□□ -0.72
SNX1-209ENST00000559961 IFNGP01579 166 aa10.57□□□□□ -0.72
SNX1-209ENST00000559961 WNT2P09544 360 aa10.57□□□□□ -0.72
SNX1-209ENST00000559961 BLVRAP53004 296 aa10.57□□□□□ -0.72
SNX1-209ENST00000559961 UBA52P62987 128 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms