RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 KITLGP21583 273 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 PRKACGP22612 351 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 PYCR1P32322 319 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 GRK5P34947 590 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 GGT2P36268 569 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 MPV17P39210 176 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 CRYBB2P43320 205 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 MAGEB1P43366 347 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 ENTPD1P49961 510 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 CDH15P55291 814 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 RPS7P62081 194 aaKnown RBP3.73□□□□□ -1.81
SNX1-205ENST00000559339 ESRRGP62508 458 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 GRB2P62993 217 aaKnown RBP3.73□□□□□ -1.81
SNX1-205ENST00000559339 TNFAIP6P98066 277 aaPredicted RBP3.73□□□□□ -1.81
SNX1-205ENST00000559339 PSG7Q13046 419 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 RIN1Q13671 783 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 GINS1Q14691 196 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 ATP6AP1Q15904 470 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 TSTQ16762 297 aaKnown RBP3.73□□□□□ -1.81
SNX1-205ENST00000559339 MSMPQ1L6U9 139 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 CHRFAM7AQ494W8 412 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 KLHL12Q53G59 568 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 CCDC92Q53HC0 331 aaPredicted RBP3.73□□□□□ -1.81
SNX1-205ENST00000559339 TEX30Q5JUR7 227 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 SLC35D3Q5M8T2 416 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 ZNF362Q5T0B9 420 aaPredicted RBP3.73□□□□□ -1.81
SNX1-205ENST00000559339 C6orf52Q5T4I8 152 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 OTPQ5XKR4 325 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 FAM166AQ6J272 317 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 DRAM2Q6UX65 266 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 FBXW12Q6X9E4 464 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 CFAP77Q6ZQR2 320 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 USP51Q70EK9 711 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 PGAP1Q75T13 922 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 RHOUQ7L0Q8 258 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 SHFQ7M4L6 423 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 MRPL21Q7Z2W9 205 aaKnown RBP3.73□□□□□ -1.81
SNX1-205ENST00000559339 DCXRQ7Z4W1 244 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.73□□□□□ -1.81
SNX1-205ENST00000559339 ERI1Q8IV48 349 aaKnown RBP3.73□□□□□ -1.81
SNX1-205ENST00000559339 LINC00346Q8IVM7 164 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 PARP8Q8N3A8 854 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 FTMTQ8N4E7 242 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 OR2Z1Q8NG97 314 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 OR51L1Q8NGJ5 315 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 OR8D4Q8NGM9 314 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 OR9Q1Q8NGQ5 310 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 OR6N2Q8NGY6 317 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 OR13G1Q8NGZ3 307 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 OR4Q3Q8NH05 313 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 OR5K1Q8NHB7 308 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 SPRYD4Q8WW59 207 aaPredicted RBP3.73□□□□□ -1.81
SNX1-205ENST00000559339 SLC7A6Q92536 515 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 RAB1CQ92928 201 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 RAB39BQ96DA2 213 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 CMBLQ96DG6 245 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 ZNF799Q96GE5 643 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 INTS14Q96SY0 518 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 OSBPL10Q9BXB5 764 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 C1QTNF5Q9BXJ0 243 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 BEX2Q9BXY8 128 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 SLC22A4Q9H015 551 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 SHARPINQ9H0F6 387 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 OR51V1Q9H2C8 321 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 FN3KQ9H479 309 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 TOR3AQ9H497 397 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 OPA3Q9H6K4 179 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 MSL2Q9HCI7 577 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 KRT84Q9NSB2 600 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 ZNF275Q9NSD4 429 aaPredicted RBP3.73□□□□□ -1.81
SNX1-205ENST00000559339 CENPMQ9NSP4 180 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 DDX28Q9NUL7 540 aaKnown RBP3.73□□□□□ -1.81
SNX1-205ENST00000559339 TMEM100Q9NV29 134 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 VNN3Q9NY84 501 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 H2AFY2Q9P0M6 372 aaPredicted RBP3.73□□□□□ -1.81
SNX1-205ENST00000559339 LPAR3Q9UBY5 353 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 IL19Q9UHD0 177 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 PURGQ9UJV8 347 aaKnown RBP3.73□□□□□ -1.81
SNX1-205ENST00000559339 STARD10Q9Y365 291 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 NOP16Q9Y3C1 178 aaKnown RBP3.73□□□□□ -1.81
SNX1-205ENST00000559339 ORC6Q9Y5N6 252 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 LHFPL6Q9Y693 200 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 COMMD3-BMI1R4GMX3 469 aa3.73□□□□□ -1.81
SNX1-205ENST00000559339 ABCA1O95477 2261 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 A0A096LNT2 108 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 IGHV4-61A0A0C4DH41 118 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 ISPDA4D126 451 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 LRP5LA4QPB2 252 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 GGT3PA6NGU5 568 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 ZSCAN5BA6NJL1 495 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 FAM183AA6NL82 134 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 LRRC30A6NM36 301 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 LYNX1G3V0Z9 82 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 IFNL4K9M1U5 179 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 XRCC2O43543 280 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 LMX1BO60663 402 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 LILRA1O75019 489 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 CRLF1O75462 422 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 NCR1O76036 304 aa3.72□□□□□ -1.81
SNX1-205ENST00000559339 LYNP07948 512 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms