RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 KCTD14Q9BQ13 255 aaPredicted RBP3.64□□□□□ -1.83
SPG11-211ENST00000558561 TMEM43Q9BTV4 400 aa3.64□□□□□ -1.83
SPG11-211ENST00000558561 SF3B5Q9BWJ5 86 aaKnown RBP3.64□□□□□ -1.83
SPG11-211ENST00000558561 MRPL13Q9BYD1 178 aaKnown RBP3.64□□□□□ -1.83
SPG11-211ENST00000558561 OR51B6Q9H340 312 aa3.64□□□□□ -1.83
SPG11-211ENST00000558561 ARMC7Q9H6L4 198 aa3.64□□□□□ -1.83
SPG11-211ENST00000558561 MAP6D1Q9H9H5 199 aa3.64□□□□□ -1.83
SPG11-211ENST00000558561 NMNAT1Q9HAN9 279 aaPredicted RBP3.64□□□□□ -1.83
SPG11-211ENST00000558561 C12orf10Q9HB07 376 aa3.64□□□□□ -1.83
SPG11-211ENST00000558561 PNRC2Q9NPJ4 139 aaKnown RBP3.64□□□□□ -1.83
SPG11-211ENST00000558561 NANSQ9NR45 359 aa3.64□□□□□ -1.83
SPG11-211ENST00000558561 DECR2Q9NUI1 292 aa3.64□□□□□ -1.83
SPG11-211ENST00000558561 TMEM160Q9NX00 188 aa3.64□□□□□ -1.83
SPG11-211ENST00000558561 TAS2R16Q9NYV7 291 aa3.64□□□□□ -1.83
SPG11-211ENST00000558561 MYEF2Q9P2K5 600 aaKnown RBP3.64□□□□□ -1.83
SPG11-211ENST00000558561 MALT1Q9UDY8 824 aa3.64□□□□□ -1.83
SPG11-211ENST00000558561 SLC13A4Q9UKG4 626 aa3.64□□□□□ -1.83
SPG11-211ENST00000558561 RASD1Q9Y272 281 aa3.64□□□□□ -1.83
SPG11-211ENST00000558561 SLC9A8Q9Y2E8 581 aa3.64□□□□□ -1.83
SPG11-211ENST00000558561 ADAM18Q9Y3Q7 739 aa3.64□□□□□ -1.83
SPG11-211ENST00000558561 UGT2A1Q9Y4X1 527 aa3.64□□□□□ -1.83
SPG11-211ENST00000558561 FLNAP21333 2647 aaKnown RBP3.64□□□□□ -1.83
SPG11-211ENST00000558561 FN1P02751 2386 aaKnown RBP3.63□□□□□ -1.83
SPG11-211ENST00000558561 MTORP42345 2549 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 C5orf63A6NC05 138 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 OR6C68A6NDL8 312 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 FAM90A7PA6NKC0 464 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 SH2D7A6NKC9 451 aaPredicted RBP3.63□□□□□ -1.83
SPG11-211ENST00000558561 ZNF726A6NNF4 738 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 FAM90A22PA8MWA6 464 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 FAM90A12PA8MX19 464 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 FAM90A23PA8MXZ1 464 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 RPL36A-HNRNPH2H7BZ11 118 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 ARPC2O15144 300 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 SLC22A2O15244 555 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 OR2T1O43869 369 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 MGRN1O60291 552 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 KRT33AO76009 404 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 VAMP5O95183 116 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 LY6G6DO95868 133 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 FAM107AO95990 144 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 BCL10O95999 233 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 CLPTM1O96005 669 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 PGA4P0DJD7 388 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 PGA3P0DJD8 388 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 PSKH1P11801 424 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 CD79AP11912 226 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 HSD17B1P14061 328 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 UQCRBP14927 111 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 CBR1P16152 277 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 ACADSP16219 412 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 PRKACGP22612 351 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 COL8A2P25067 703 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 FKBP2P26885 142 aaKnown RBP3.63□□□□□ -1.83
SPG11-211ENST00000558561 TTKP33981 857 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 CDKN2AP42771 156 aaKnown RBP3.63□□□□□ -1.83
SPG11-211ENST00000558561 OMPP47874 163 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 IDH3GP51553 393 aaPredicted RBP3.63□□□□□ -1.83
SPG11-211ENST00000558561 PRPS1P60891 318 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 NCALDP61601 193 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 KRTAP1-1Q07627 177 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 PUDPQ08623 228 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 HIST3H3Q16695 136 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 RSPO1Q2MKA7 263 aaPredicted RBP3.63□□□□□ -1.83
SPG11-211ENST00000558561 ALKBH6Q3KRA9 238 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 IFI44LQ53G44 452 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 INTS11Q5TA45 600 aaKnown RBP3.63□□□□□ -1.83
SPG11-211ENST00000558561 C11orf71Q6IPW1 123 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 ERICH5Q6P6B1 374 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 SLC25A47Q6Q0C1 308 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 SLC22A25Q6T423 547 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 PXKQ7Z7A4 578 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 NAA40Q86UY6 237 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 HS3ST5Q8IZT8 346 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 PGAM4Q8N0Y7 254 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 GPR137CQ8N3F9 429 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 ZNF611Q8N823 705 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 POMGNT2Q8NAT1 580 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 OR6N1Q8NGY5 312 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 OR6S1Q8NH40 331 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 AKR7LQ8NHP1 331 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 LIPHQ8WWY8 451 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 SLC7A6Q92536 515 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 RASD2Q96D21 266 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 BPIFA2Q96DR5 249 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 MUCL1Q96DR8 90 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 CMTM5Q96DZ9 223 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 FBXO17Q96EF6 278 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 PYURFQ96I23 114 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 CCL19Q99731 98 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 SH3GL1Q99961 368 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 THTPAQ9BU02 230 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 TRAF4Q9BUZ4 470 aaPredicted RBP3.63□□□□□ -1.83
SPG11-211ENST00000558561 FNDC11Q9BVV2 318 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 IFT27Q9BW83 186 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 LINC00470Q9BZP3 86 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 CXorf56Q9H5V9 222 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 GORASP2Q9H8Y8 452 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 HHATLQ9HCP6 504 aa3.63□□□□□ -1.83
SPG11-211ENST00000558561 FANCFQ9NPI8 374 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms