RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 MLANAQ16655 118 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 TBC1D28Q2M2D7 210 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 GTDC1Q4AE62 458 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 SPRNQ5BIV9 151 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 SPATA46Q5T0L3 261 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 C17orf107Q6ZR85 190 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 RHOUQ7L0Q8 258 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 RRM2BQ7LG56 351 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 NANOGNBQ7Z5D8 188 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 NET1Q7Z628 596 aaPredicted RBP4.92□□□□□ -1.62
VPS33B-207ENST00000557470 FAM185AQ8N0U4 392 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 SCAIQ8N9R8 606 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 BHLHE22Q8NFJ8 381 aaPredicted RBP4.92□□□□□ -1.62
VPS33B-207ENST00000557470 GEMIN6Q8WXD5 167 aaKnown RBP4.92□□□□□ -1.62
VPS33B-207ENST00000557470 CORO2AQ92828 525 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 TMEM54Q969K7 222 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 CCT8L2Q96SF2 557 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 CITED1Q99966 193 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 MRI1Q9BV20 369 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 RSPO3Q9BXY4 272 aaPredicted RBP4.92□□□□□ -1.62
VPS33B-207ENST00000557470 NUF2Q9BZD4 464 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 BCL2L14Q9BZR8 327 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 TINAGL1Q9GZM7 467 aaPredicted RBP4.92□□□□□ -1.62
VPS33B-207ENST00000557470 C20orf27Q9GZN8 174 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 MMP27Q9H306 513 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 CENPHQ9H3R5 247 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 C12orf10Q9HB07 376 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 SCPEP1Q9HB40 452 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 CACYBPQ9HB71 228 aaKnown RBP4.92□□□□□ -1.62
VPS33B-207ENST00000557470 VCX3AQ9NNX9 186 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 TCF7L2Q9NQB0 619 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 SLC35D1Q9NTN3 355 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 TMEM38BQ9NVV0 291 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 MRPL39Q9NYK5 338 aaKnown RBP4.92□□□□□ -1.62
VPS33B-207ENST00000557470 GLTPQ9NZD2 209 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 IFT52Q9Y366 437 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 ADAM18Q9Y3Q7 739 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 INSIG2Q9Y5U4 225 aa4.92□□□□□ -1.62
VPS33B-207ENST00000557470 A0A0G2JPF8 293 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 TEX13CA0A0J9YWL9 993 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 PLSCR5A0PG75 271 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 HNRNPCL2B2RXH8 293 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 HNRNPCL3B7ZW38 293 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 C11orf98E9PRG8 122 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 M0QZ24 198 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 RFXANKO14593 260 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 HOXA3O43365 443 aaPredicted RBP4.91□□□□□ -1.62
VPS33B-207ENST00000557470 RGS10O43665 173 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 IGHV2-70P01814 119 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 SERPINE1P05121 402 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 MYZAPP0CAP1 466 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 HNRNPCL4P0DMR1 293 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 GABRB1P18505 474 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 ETV4P43268 484 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 MTNR1AP48039 350 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 MMP15P51511 669 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 RAG2P55895 527 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 ABCE1P61221 599 aaKnown RBP4.91□□□□□ -1.62
VPS33B-207ENST00000557470 EGR3Q06889 387 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 SLC3A1Q07837 685 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 MOGQ16653 247 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 ALG10BQ5I7T1 473 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 TMEM53Q6P2H8 277 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 C9orf139Q6ZV77 190 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 SLC16A14Q7RTX9 510 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 C1QL4Q86Z23 238 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 NUDCD3Q8IVD9 361 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 ZNF101Q8IZC7 436 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 SLC7A5P1Q8MH63 180 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 PARP8Q8N3A8 854 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 KIR3DL3Q8N743 410 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 CPEB3Q8NE35 698 aaKnown RBP4.91□□□□□ -1.62
VPS33B-207ENST00000557470 OR4K5Q8NGD3 323 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 OR52E2Q8NGJ4 325 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 OR1J1Q8NGS3 322 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 OR6S1Q8NH40 331 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 OR6X1Q8NH79 312 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 AENQ8WTP8 325 aaKnown RBP4.91□□□□□ -1.62
VPS33B-207ENST00000557470 DNAJA4Q8WW22 397 aaPredicted RBP4.91□□□□□ -1.62
VPS33B-207ENST00000557470 MAL2Q969L2 176 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 WDFY2Q96P53 400 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 DCLRE1CQ96SD1 692 aaKnown RBP4.91□□□□□ -1.62
VPS33B-207ENST00000557470 SORT1Q99523 831 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 EPYCQ99645 322 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 C1orf198Q9H425 327 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 RNF121Q9H920 327 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 MEAF6Q9HAF1 191 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 TPT1P8Q9HAU6 139 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 AIG1Q9NVV5 245 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 DNAJB11Q9UBS4 358 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 TESQ9UGI8 421 aaKnown RBP4.91□□□□□ -1.62
VPS33B-207ENST00000557470 MAGEL2Q9UJ55 1249 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 KCNK7Q9Y2U2 307 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 SH3GLB1Q9Y371 365 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 NPTNQ9Y639 398 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 CAPN7Q9Y6W3 813 aa4.91□□□□□ -1.62
VPS33B-207ENST00000557470 KMT2CQ8NEZ4 4911 aaKnown RBP4.91□□□□□ -1.62
VPS33B-207ENST00000557470 LOC100509620A0A075B734 347 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 TRAV40A0A0B4J280 105 aa4.9□□□□□ -1.63
VPS33B-207ENST00000557470 A0A0B4J2E0 115 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms