RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 KITLGP21583 273 aa10.66□□□□□ -0.7
SLIRP-209ENST00000557342 USF1P22415 310 aaPredicted RBP10.66□□□□□ -0.7
SLIRP-209ENST00000557342 GIFP27352 417 aa10.66□□□□□ -0.7
SLIRP-209ENST00000557342 RPS27P42677 84 aaKnown RBP10.66□□□□□ -0.7
SLIRP-209ENST00000557342 NR4A2P43354 598 aa10.66□□□□□ -0.7
SLIRP-209ENST00000557342 SLC15A1P46059 708 aa10.66□□□□□ -0.7
SLIRP-209ENST00000557342 MMP15P51511 669 aa10.66□□□□□ -0.7
SLIRP-209ENST00000557342 RPS7P62081 194 aaKnown RBP10.66□□□□□ -0.7
SLIRP-209ENST00000557342 PSG7Q13046 419 aa10.66□□□□□ -0.7
SLIRP-209ENST00000557342 EIF2B1Q14232 305 aaKnown RBP10.66□□□□□ -0.7
SLIRP-209ENST00000557342 RSPO1Q2MKA7 263 aaPredicted RBP10.66□□□□□ -0.7
SLIRP-209ENST00000557342 COLCA1Q6ZS62 124 aa10.66□□□□□ -0.7
SLIRP-209ENST00000557342 CXXC5Q7LFL8 322 aaKnown RBP10.66□□□□□ -0.7
SLIRP-209ENST00000557342 OR6N2Q8NGY6 317 aa10.66□□□□□ -0.7
SLIRP-209ENST00000557342 HAVCR1Q96D42 359 aa10.66□□□□□ -0.7
SLIRP-209ENST00000557342 CMBLQ96DG6 245 aa10.66□□□□□ -0.7
SLIRP-209ENST00000557342 SLAMF6Q96DU3 332 aa10.66□□□□□ -0.7
SLIRP-209ENST00000557342 KCNJ15Q99712 375 aa10.66□□□□□ -0.7
SLIRP-209ENST00000557342 SMR3AQ99954 134 aa10.66□□□□□ -0.7
SLIRP-209ENST00000557342 PKP2Q99959 881 aa10.66□□□□□ -0.7
SLIRP-209ENST00000557342 COPS4Q9BT78 406 aa10.66□□□□□ -0.7
SLIRP-209ENST00000557342 C1QTNF5Q9BXJ0 243 aa10.66□□□□□ -0.7
SLIRP-209ENST00000557342 POFUT1Q9H488 388 aa10.66□□□□□ -0.7
SLIRP-209ENST00000557342 CHODLQ9H9P2 273 aa10.66□□□□□ -0.7
SLIRP-209ENST00000557342 DECR2Q9NUI1 292 aa10.66□□□□□ -0.7
SLIRP-209ENST00000557342 PURGQ9UJV8 347 aaKnown RBP10.66□□□□□ -0.7
SLIRP-209ENST00000557342 ZDHHC8Q9ULC8 765 aa10.66□□□□□ -0.7
SLIRP-209ENST00000557342 FLNAP21333 2647 aaKnown RBP10.66□□□□□ -0.7
SLIRP-209ENST00000557342 SAC3D1A6NKF1 404 aa10.65□□□□□ -0.7
SLIRP-209ENST00000557342 ZAR1LA6NP61 321 aa10.65□□□□□ -0.7
SLIRP-209ENST00000557342 H3BNX3 289 aa10.65□□□□□ -0.7
SLIRP-209ENST00000557342 M0R135 149 aa10.65□□□□□ -0.7
SLIRP-209ENST00000557342 TPD52L2O43399 206 aaKnown RBP10.65□□□□□ -0.7
SLIRP-209ENST00000557342 MITFO75030 526 aaPredicted RBP10.65□□□□□ -0.7
SLIRP-209ENST00000557342 LY6G6DO95868 133 aa10.65□□□□□ -0.7
SLIRP-209ENST00000557342 HPXP02790 462 aa10.65□□□□□ -0.7
SLIRP-209ENST00000557342 LCATP04180 440 aa10.65□□□□□ -0.7
SLIRP-209ENST00000557342 ADH4P08319 380 aa10.65□□□□□ -0.7
SLIRP-209ENST00000557342 ACHEP22303 614 aa10.65□□□□□ -0.7
SLIRP-209ENST00000557342 MAGEB1P43366 347 aa10.65□□□□□ -0.7
SLIRP-209ENST00000557342 SLC6A9P48067 706 aa10.65□□□□□ -0.7
SLIRP-209ENST00000557342 GRB2P62993 217 aaKnown RBP10.65□□□□□ -0.7
SLIRP-209ENST00000557342 ELF3P78545 371 aaPredicted RBP10.65□□□□□ -0.7
SLIRP-209ENST00000557342 PPP2R2BQ00005 443 aa10.65□□□□□ -0.7
SLIRP-209ENST00000557342 MALLQ13021 153 aa10.65□□□□□ -0.7
SLIRP-209ENST00000557342 LCN1P1Q5VSP4 162 aa10.65□□□□□ -0.7
SLIRP-209ENST00000557342 SLX4IPQ5VYV7 408 aa10.65□□□□□ -0.7
SLIRP-209ENST00000557342 DRAM2Q6UX65 266 aa10.65□□□□□ -0.7
SLIRP-209ENST00000557342 FBXW12Q6X9E4 464 aa10.65□□□□□ -0.7
SLIRP-209ENST00000557342 RHOUQ7L0Q8 258 aa10.65□□□□□ -0.7
SLIRP-209ENST00000557342 DPY19L4Q7Z388 723 aa10.65□□□□□ -0.7
SLIRP-209ENST00000557342 TIGD4Q8IY51 512 aa10.65□□□□□ -0.7
SLIRP-209ENST00000557342 ZNF454Q8N9F8 522 aa10.65□□□□□ -0.7
SLIRP-209ENST00000557342 MAPK1IP1LQ8NDC0 245 aa10.65□□□□□ -0.7
SLIRP-209ENST00000557342 OR10S1Q8NGN2 331 aa10.65□□□□□ -0.7
SLIRP-209ENST00000557342 ST7LQ8TDW4 575 aa10.65□□□□□ -0.7
SLIRP-209ENST00000557342 ZMYND19Q96E35 227 aaPredicted RBP10.65□□□□□ -0.7
SLIRP-209ENST00000557342 ZNF799Q96GE5 643 aa10.65□□□□□ -0.7
SLIRP-209ENST00000557342 CIB1Q99828 191 aa10.65□□□□□ -0.7
SLIRP-209ENST00000557342 EGLN1Q9GZT9 426 aa10.65□□□□□ -0.7
SLIRP-209ENST00000557342 TOR3AQ9H497 397 aa10.65□□□□□ -0.7
SLIRP-209ENST00000557342 SP140LQ9H930 580 aa10.65□□□□□ -0.7
SLIRP-209ENST00000557342 CENPMQ9NSP4 180 aa10.65□□□□□ -0.7
SLIRP-209ENST00000557342 PTTG3PQ9NZH4 202 aa10.65□□□□□ -0.7
SLIRP-209ENST00000557342 H2AFY2Q9P0M6 372 aaPredicted RBP10.65□□□□□ -0.7
SLIRP-209ENST00000557342 TMEFF2Q9UIK5 374 aaPredicted RBP10.65□□□□□ -0.7
SLIRP-209ENST00000557342 ORC6Q9Y5N6 252 aa10.65□□□□□ -0.7
SLIRP-209ENST00000557342 A0A096LNT2 108 aa10.64□□□□□ -0.71
SLIRP-209ENST00000557342 H0YHG0 523 aa10.64□□□□□ -0.71
SLIRP-209ENST00000557342 SPRY3O43610 288 aa10.64□□□□□ -0.71
SLIRP-209ENST00000557342 IGHV1-46P01743 117 aa10.64□□□□□ -0.71
SLIRP-209ENST00000557342 APOC1P02654 83 aa10.64□□□□□ -0.71
SLIRP-209ENST00000557342 PSKH1P11801 424 aa10.64□□□□□ -0.71
SLIRP-209ENST00000557342 SELEP16581 610 aa10.64□□□□□ -0.71
SLIRP-209ENST00000557342 SLC2A5P22732 501 aa10.64□□□□□ -0.71
SLIRP-209ENST00000557342 TNFSF4P23510 183 aa10.64□□□□□ -0.71
SLIRP-209ENST00000557342 HSD11B1P28845 292 aa10.64□□□□□ -0.71
SLIRP-209ENST00000557342 OTX1P32242 354 aaPredicted RBP10.64□□□□□ -0.71
SLIRP-209ENST00000557342 CCL8P80075 99 aa10.64□□□□□ -0.71
SLIRP-209ENST00000557342 RIN1Q13671 783 aa10.64□□□□□ -0.71
SLIRP-209ENST00000557342 APOFQ13790 326 aa10.64□□□□□ -0.71
SLIRP-209ENST00000557342 GGTLC2Q14390 218 aa10.64□□□□□ -0.71
SLIRP-209ENST00000557342 TSTQ16762 297 aaKnown RBP10.64□□□□□ -0.71
SLIRP-209ENST00000557342 TMEM255AQ5JRV8 349 aa10.64□□□□□ -0.71
SLIRP-209ENST00000557342 C12orf73Q69YU5 71 aa10.64□□□□□ -0.71
SLIRP-209ENST00000557342 ABHD6Q9BV23 337 aa10.64□□□□□ -0.71
SLIRP-209ENST00000557342 GABARAPL3Q9BY60 117 aa10.64□□□□□ -0.71
SLIRP-209ENST00000557342 BPESC1Q9GZL8 116 aa10.64□□□□□ -0.71
SLIRP-209ENST00000557342 SAP30LQ9HAJ7 183 aa10.64□□□□□ -0.71
SLIRP-209ENST00000557342 S100A14Q9HCY8 104 aa10.64□□□□□ -0.71
SLIRP-209ENST00000557342 ACANP16112 2415 aa10.63□□□□□ -0.71
SLIRP-209ENST00000557342 DYSFO75923 2080 aa10.63□□□□□ -0.71
SLIRP-209ENST00000557342 IGHV1-69-2A0A0G2JMI3 117 aa10.63□□□□□ -0.71
SLIRP-209ENST00000557342 ZSCAN5BA6NJL1 495 aa10.63□□□□□ -0.71
SLIRP-209ENST00000557342 TLX2O43763 284 aaPredicted RBP10.63□□□□□ -0.71
SLIRP-209ENST00000557342 PRKYO43930 277 aa10.63□□□□□ -0.71
SLIRP-209ENST00000557342 NCR1O76036 304 aa10.63□□□□□ -0.71
SLIRP-209ENST00000557342 LYNP07948 512 aa10.63□□□□□ -0.71
SLIRP-209ENST00000557342 CD55P08174 381 aa10.63□□□□□ -0.71
SLIRP-209ENST00000557342 COL8A2P25067 703 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms