RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 ESRP2Q9H6T0 727 aaKnown RBP15.59■□□□□ 0.09
PTPN21-208ENST00000556564 ABCD4O14678 606 aa15.59■□□□□ 0.09
PTPN21-208ENST00000556564 PRICKLE3O43900 615 aaPredicted RBP15.59■□□□□ 0.09
PTPN21-208ENST00000556564 CNIH1O95406 144 aa15.59■□□□□ 0.09
PTPN21-208ENST00000556564 CCL2P13500 99 aa15.59■□□□□ 0.09
PTPN21-208ENST00000556564 RNLSQ5VYX0 342 aa15.59■□□□□ 0.09
PTPN21-208ENST00000556564 KCTD12Q96CX2 325 aaKnown RBP15.59■□□□□ 0.09
PTPN21-208ENST00000556564 ZNF701M0R085 212 aaPredicted RBP15.58■□□□□ 0.09
PTPN21-208ENST00000556564 CYR61O00622 381 aa15.58■□□□□ 0.09
PTPN21-208ENST00000556564 TMEM43Q9BTV4 400 aa15.58■□□□□ 0.09
PTPN21-208ENST00000556564 OR51J1Q9H342 316 aa15.58■□□□□ 0.09
PTPN21-208ENST00000556564 GNB4Q9HAV0 340 aa15.58■□□□□ 0.09
PTPN21-208ENST00000556564 SDHAF2Q9NX18 166 aa15.58■□□□□ 0.09
PTPN21-208ENST00000556564 B4E171 279 aa15.58■□□□□ 0.09
PTPN21-208ENST00000556564 TSPAN7P41732 249 aa15.58■□□□□ 0.09
PTPN21-208ENST00000556564 HACD4Q5VWC8 232 aa15.58■□□□□ 0.09
PTPN21-208ENST00000556564 GTPBP8Q8N3Z3 284 aaPredicted RBP15.58■□□□□ 0.09
PTPN21-208ENST00000556564 C12orf45Q8N5I9 185 aaPredicted RBP15.58■□□□□ 0.09
PTPN21-208ENST00000556564 NKX2-8O15522 239 aa15.58■□□□□ 0.08
PTPN21-208ENST00000556564 ISL1P61371 349 aa15.58■□□□□ 0.08
PTPN21-208ENST00000556564 ZNF92Q03936 586 aa15.58■□□□□ 0.08
PTPN21-208ENST00000556564 RSPO4Q2I0M5 234 aaPredicted RBP15.58■□□□□ 0.08
PTPN21-208ENST00000556564 FAM109AQ8N4B1 249 aa15.58■□□□□ 0.08
PTPN21-208ENST00000556564 SLAMF9Q96A28 289 aa15.58■□□□□ 0.08
PTPN21-208ENST00000556564 MT-CO2P00403 227 aa15.58■□□□□ 0.08
PTPN21-208ENST00000556564 SLC23A3Q6PIS1 610 aa15.58■□□□□ 0.08
PTPN21-208ENST00000556564 RND1Q92730 232 aa15.58■□□□□ 0.08
PTPN21-208ENST00000556564 C7orf50Q9BRJ6 194 aaKnown RBP15.58■□□□□ 0.08
PTPN21-208ENST00000556564 KLK4Q9Y5K2 254 aa15.58■□□□□ 0.08
PTPN21-208ENST00000556564 PSME4Q14997 1843 aa15.58■□□□□ 0.08
PTPN21-208ENST00000556564 ARRDC5A6NEK1 342 aa15.58■□□□□ 0.08
PTPN21-208ENST00000556564 DEFA4P12838 97 aa15.58■□□□□ 0.08
PTPN21-208ENST00000556564 C19orf48Q6RUI8 117 aa15.58■□□□□ 0.08
PTPN21-208ENST00000556564 PRSS45Q7RTY3 260 aa15.58■□□□□ 0.08
PTPN21-208ENST00000556564 FN3KRPQ9HA64 309 aa15.58■□□□□ 0.08
PTPN21-208ENST00000556564 MEIKINA0A087WXM9 373 aa15.57■□□□□ 0.08
PTPN21-208ENST00000556564 FAM221AA4D161 298 aa15.57■□□□□ 0.08
PTPN21-208ENST00000556564 ZNF705EA8MWA4 302 aaPredicted RBP15.57■□□□□ 0.08
PTPN21-208ENST00000556564 PHF1O43189 567 aaPredicted RBP15.57■□□□□ 0.08
PTPN21-208ENST00000556564 GP1BAP07359 652 aa15.57■□□□□ 0.08
PTPN21-208ENST00000556564 TMPRSS3P57727 454 aa15.57■□□□□ 0.08
PTPN21-208ENST00000556564 DOC2BQ14184 412 aa15.57■□□□□ 0.08
PTPN21-208ENST00000556564 SLC30A7Q8NEW0 376 aa15.57■□□□□ 0.08
PTPN21-208ENST00000556564 KIF25Q9UIL4 384 aa15.57■□□□□ 0.08
PTPN21-208ENST00000556564 PRELID3BQ9Y3B1 194 aa15.57■□□□□ 0.08
PTPN21-208ENST00000556564 TMEM82A0PJX8 343 aa15.57■□□□□ 0.08
PTPN21-208ENST00000556564 SLC22A23A1A5C7 686 aa15.57■□□□□ 0.08
PTPN21-208ENST00000556564 C1QAP02745 245 aa15.57■□□□□ 0.08
PTPN21-208ENST00000556564 SOX18P35713 384 aa15.57■□□□□ 0.08
PTPN21-208ENST00000556564 MCHR2Q969V1 340 aa15.57■□□□□ 0.08
PTPN21-208ENST00000556564 UBL7Q96S82 380 aaPredicted RBP15.57■□□□□ 0.08
PTPN21-208ENST00000556564 WDR54Q9H977 334 aa15.57■□□□□ 0.08
PTPN21-208ENST00000556564 KCNJ16Q9NPI9 418 aa15.57■□□□□ 0.08
PTPN21-208ENST00000556564 TMEM129A0AVI4 362 aa15.57■□□□□ 0.08
PTPN21-208ENST00000556564 SPRY1O43609 319 aaPredicted RBP15.57■□□□□ 0.08
PTPN21-208ENST00000556564 ZNF141Q15928 474 aa15.57■□□□□ 0.08
PTPN21-208ENST00000556564 GIMAP1Q8WWP7 306 aa15.57■□□□□ 0.08
PTPN21-208ENST00000556564 KCNJ15Q99712 375 aa15.57■□□□□ 0.08
PTPN21-208ENST00000556564 PPIL3Q9H2H8 161 aaKnown RBP15.57■□□□□ 0.08
PTPN21-208ENST00000556564 FOXS1O43638 330 aa15.57■□□□□ 0.08
PTPN21-208ENST00000556564 UCNP55089 124 aa15.57■□□□□ 0.08
PTPN21-208ENST00000556564 OR52W1Q6IF63 320 aa15.57■□□□□ 0.08
PTPN21-208ENST00000556564 PLXDC2Q6UX71 529 aa15.57■□□□□ 0.08
PTPN21-208ENST00000556564 OR2T35Q8NGX2 323 aa15.57■□□□□ 0.08
PTPN21-208ENST00000556564 SUCNR1Q9BXA5 334 aa15.57■□□□□ 0.08
PTPN21-208ENST00000556564 RNF167Q9H6Y7 350 aa15.57■□□□□ 0.08
PTPN21-208ENST00000556564 TRABD2BA6NFA1 517 aa15.57■□□□□ 0.08
PTPN21-208ENST00000556564 CELA2AP08217 269 aa15.57■□□□□ 0.08
PTPN21-208ENST00000556564 MFGE8Q08431 387 aaPredicted RBP15.57■□□□□ 0.08
PTPN21-208ENST00000556564 SPAG16Q8N0X2 631 aa15.57■□□□□ 0.08
PTPN21-208ENST00000556564 OR2M7Q8NG81 312 aa15.57■□□□□ 0.08
PTPN21-208ENST00000556564 FBXL2Q9UKC9 423 aa15.57■□□□□ 0.08
PTPN21-208ENST00000556564 EXO1Q9UQ84 846 aaKnown RBP15.57■□□□□ 0.08
PTPN21-208ENST00000556564 FITM1A5D6W6 292 aa15.56■□□□□ 0.08
PTPN21-208ENST00000556564 I3L521 148 aa15.56■□□□□ 0.08
PTPN21-208ENST00000556564 IMPA2O14732 288 aa15.56■□□□□ 0.08
PTPN21-208ENST00000556564 CDC14BO60729 498 aa15.56■□□□□ 0.08
PTPN21-208ENST00000556564 PRAF2O60831 178 aa15.56■□□□□ 0.08
PTPN21-208ENST00000556564 SPDEFO95238 335 aa15.56■□□□□ 0.08
PTPN21-208ENST00000556564 SLC37A1P57057 533 aa15.56■□□□□ 0.08
PTPN21-208ENST00000556564 FXNQ16595 210 aa15.56■□□□□ 0.08
PTPN21-208ENST00000556564 MSRB3Q8IXL7 192 aa15.56■□□□□ 0.08
PTPN21-208ENST00000556564 TMEM52Q8NDY8 209 aa15.56■□□□□ 0.08
PTPN21-208ENST00000556564 GPR32P1Q8NGA4 272 aa15.56■□□□□ 0.08
PTPN21-208ENST00000556564 DNASE2BQ8WZ79 361 aa15.56■□□□□ 0.08
PTPN21-208ENST00000556564 APOBEC3DQ96AK3 386 aaPredicted RBP15.56■□□□□ 0.08
PTPN21-208ENST00000556564 GCM1Q9NP62 436 aa15.56■□□□□ 0.08
PTPN21-208ENST00000556564 NKX2-5P52952 324 aaPredicted RBP15.56■□□□□ 0.08
PTPN21-208ENST00000556564 FAM198BQ6UWH4 519 aa15.56■□□□□ 0.08
PTPN21-208ENST00000556564 DPPA2Q7Z7J5 298 aa15.56■□□□□ 0.08
PTPN21-208ENST00000556564 FJX1Q86VR8 437 aa15.56■□□□□ 0.08
PTPN21-208ENST00000556564 TCTEX1D2Q8WW35 142 aa15.56■□□□□ 0.08
PTPN21-208ENST00000556564 TSPAN32Q96QS1 320 aa15.56■□□□□ 0.08
PTPN21-208ENST00000556564 ADAT1Q9BUB4 502 aaKnown RBP15.56■□□□□ 0.08
PTPN21-208ENST00000556564 HIPK2Q9H2X6 1198 aa15.56■□□□□ 0.08
PTPN21-208ENST00000556564 GABRA1P14867 456 aa15.56■□□□□ 0.08
PTPN21-208ENST00000556564 FAHP16930 419 aa15.56■□□□□ 0.08
PTPN21-208ENST00000556564 NLRC3Q7RTR2 1065 aa15.56■□□□□ 0.08
PTPN21-208ENST00000556564 BHLHA15Q7RTS1 189 aaPredicted RBP15.56■□□□□ 0.08
PTPN21-208ENST00000556564 LSRQ86X29 649 aaPredicted RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms