RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 POLR1DQ9Y2S0 133 aa8.26□□□□□ -1.09
SRP54-210ENST00000556380 STARD10Q9Y365 291 aa8.26□□□□□ -1.09
SRP54-210ENST00000556380 ANK3Q12955 4377 aaKnown RBP8.25□□□□□ -1.09
SRP54-210ENST00000556380 ZFHX3Q15911 3703 aa8.25□□□□□ -1.09
SRP54-210ENST00000556380 CCDC182A6NF36 153 aa8.25□□□□□ -1.09
SRP54-210ENST00000556380 M0R129 80 aa8.25□□□□□ -1.09
SRP54-210ENST00000556380 EI24O14681 340 aa8.25□□□□□ -1.09
SRP54-210ENST00000556380 PRODHO43272 600 aa8.25□□□□□ -1.09
SRP54-210ENST00000556380 LY6HO94772 140 aa8.25□□□□□ -1.09
SRP54-210ENST00000556380 ABHD16AO95870 558 aa8.25□□□□□ -1.09
SRP54-210ENST00000556380 ADRA2AP08913 450 aa8.25□□□□□ -1.09
SRP54-210ENST00000556380 ACSM4P0C7M7 580 aa8.25□□□□□ -1.09
SRP54-210ENST00000556380 TUBG1P23258 451 aa8.25□□□□□ -1.09
SRP54-210ENST00000556380 MPV17P39210 176 aa8.25□□□□□ -1.09
SRP54-210ENST00000556380 ALDH3B1P43353 468 aa8.25□□□□□ -1.09
SRP54-210ENST00000556380 ALDH3A2P51648 485 aa8.25□□□□□ -1.09
SRP54-210ENST00000556380 SLC35D3Q5M8T2 416 aa8.25□□□□□ -1.09
SRP54-210ENST00000556380 SPATA46Q5T0L3 261 aa8.25□□□□□ -1.09
SRP54-210ENST00000556380 TMEM154Q6P9G4 183 aa8.25□□□□□ -1.09
SRP54-210ENST00000556380 CXXC5Q7LFL8 322 aaKnown RBP8.25□□□□□ -1.09
SRP54-210ENST00000556380 DCXRQ7Z4W1 244 aa8.25□□□□□ -1.09
SRP54-210ENST00000556380 NAA40Q86UY6 237 aa8.25□□□□□ -1.09
SRP54-210ENST00000556380 OR6K6Q8NGW6 343 aa8.25□□□□□ -1.09
SRP54-210ENST00000556380 OR2AJ1Q8NGZ0 328 aa8.25□□□□□ -1.09
SRP54-210ENST00000556380 IPCEF1Q8WWN9 437 aaPredicted RBP8.25□□□□□ -1.09
SRP54-210ENST00000556380 OTULINQ96BN8 352 aa8.25□□□□□ -1.09
SRP54-210ENST00000556380 ZMYND19Q96E35 227 aaPredicted RBP8.25□□□□□ -1.09
SRP54-210ENST00000556380 Q96MF0 132 aa8.25□□□□□ -1.09
SRP54-210ENST00000556380 AMELYQ99218 206 aa8.25□□□□□ -1.09
SRP54-210ENST00000556380 TEAD3Q99594 435 aa8.25□□□□□ -1.09
SRP54-210ENST00000556380 C1QTNF5Q9BXJ0 243 aa8.25□□□□□ -1.09
SRP54-210ENST00000556380 TEX12Q9BXU0 123 aa8.25□□□□□ -1.09
SRP54-210ENST00000556380 TUBG2Q9NRH3 451 aa8.25□□□□□ -1.09
SRP54-210ENST00000556380 TPSG1Q9NRR2 321 aa8.25□□□□□ -1.09
SRP54-210ENST00000556380 TAAR3PQ9P1P4 343 aa8.25□□□□□ -1.09
SRP54-210ENST00000556380 GRIP1Q9Y3R0 1128 aa8.25□□□□□ -1.09
SRP54-210ENST00000556380 TRIM64A6NGJ6 449 aa8.24□□□□□ -1.09
SRP54-210ENST00000556380 TRIM64BA6NI03 449 aa8.24□□□□□ -1.09
SRP54-210ENST00000556380 J3QW42 95 aa8.24□□□□□ -1.09
SRP54-210ENST00000556380 TLX2O43763 284 aaPredicted RBP8.24□□□□□ -1.09
SRP54-210ENST00000556380 SSX4O60224 188 aa8.24□□□□□ -1.09
SRP54-210ENST00000556380 SELENOFO60613 162 aa8.24□□□□□ -1.09
SRP54-210ENST00000556380 SPARCP09486 303 aa8.24□□□□□ -1.09
SRP54-210ENST00000556380 FOSL1P15407 271 aa8.24□□□□□ -1.09
SRP54-210ENST00000556380 ANOS1P23352 680 aa8.24□□□□□ -1.09
SRP54-210ENST00000556380 RGS6P49758 472 aa8.24□□□□□ -1.09
SRP54-210ENST00000556380 MMP15P51511 669 aa8.24□□□□□ -1.09
SRP54-210ENST00000556380 KLF3P57682 345 aaPredicted RBP8.24□□□□□ -1.09
SRP54-210ENST00000556380 PSG7Q13046 419 aa8.24□□□□□ -1.09
SRP54-210ENST00000556380 TNK1Q13470 666 aa8.24□□□□□ -1.09
SRP54-210ENST00000556380 APOFQ13790 326 aa8.24□□□□□ -1.09
SRP54-210ENST00000556380 MAD2L1BPQ15013 274 aaPredicted RBP8.24□□□□□ -1.09
SRP54-210ENST00000556380 CLEC12BQ2HXU8 276 aa8.24□□□□□ -1.09
SRP54-210ENST00000556380 ALKBH6Q3KRA9 238 aa8.24□□□□□ -1.09
SRP54-210ENST00000556380 ZNF718Q3SXZ3 478 aa8.24□□□□□ -1.09
SRP54-210ENST00000556380 NKAPLQ5M9Q1 402 aa8.24□□□□□ -1.09
SRP54-210ENST00000556380 ARL9Q6T311 187 aa8.24□□□□□ -1.09
SRP54-210ENST00000556380 UNQ6126/PRO20091Q6UXV3 157 aa8.24□□□□□ -1.09
SRP54-210ENST00000556380 DPY19L4Q7Z388 723 aa8.24□□□□□ -1.09
SRP54-210ENST00000556380 BCDIN3DQ7Z5W3 292 aaKnown RBP8.24□□□□□ -1.09
SRP54-210ENST00000556380 ERI1Q8IV48 349 aaKnown RBP8.24□□□□□ -1.09
SRP54-210ENST00000556380 CIARTQ8N365 385 aaPredicted RBP8.24□□□□□ -1.09
SRP54-210ENST00000556380 TCEANCQ8N8B7 351 aa8.24□□□□□ -1.09
SRP54-210ENST00000556380 TMEM163Q8TC26 289 aa8.24□□□□□ -1.09
SRP54-210ENST00000556380 RNF133Q8WVZ7 376 aa8.24□□□□□ -1.09
SRP54-210ENST00000556380 UBE2FQ969M7 185 aa8.24□□□□□ -1.09
SRP54-210ENST00000556380 HAVCR1Q96D42 359 aa8.24□□□□□ -1.09
SRP54-210ENST00000556380 PLEKHA8Q96JA3 519 aa8.24□□□□□ -1.09
SRP54-210ENST00000556380 INTS14Q96SY0 518 aa8.24□□□□□ -1.09
SRP54-210ENST00000556380 MBOAT4Q96T53 435 aa8.24□□□□□ -1.09
SRP54-210ENST00000556380 ATF6BQ99941 703 aa8.24□□□□□ -1.09
SRP54-210ENST00000556380 VRK1Q99986 396 aaPredicted RBP8.24□□□□□ -1.09
SRP54-210ENST00000556380 C9orf16Q9BUW7 83 aa8.24□□□□□ -1.09
SRP54-210ENST00000556380 ABHD6Q9BV23 337 aa8.24□□□□□ -1.09
SRP54-210ENST00000556380 MS4A5Q9H3V2 200 aa8.24□□□□□ -1.09
SRP54-210ENST00000556380 RIBC2Q9H4K1 309 aa8.24□□□□□ -1.09
SRP54-210ENST00000556380 SLCO1C1Q9NYB5 712 aa8.24□□□□□ -1.09
SRP54-210ENST00000556380 KLHDC2Q9Y2U9 406 aa8.24□□□□□ -1.09
SRP54-210ENST00000556380 A0A096LNT2 108 aa8.23□□□□□ -1.09
SRP54-210ENST00000556380 C5orf63A6NC05 138 aa8.23□□□□□ -1.09
SRP54-210ENST00000556380 F5H5K5 113 aa8.23□□□□□ -1.09
SRP54-210ENST00000556380 M0R233 179 aa8.23□□□□□ -1.09
SRP54-210ENST00000556380 DLGAP1O14490 977 aa8.23□□□□□ -1.09
SRP54-210ENST00000556380 BAG2O95816 211 aa8.23□□□□□ -1.09
SRP54-210ENST00000556380 NAT2P11245 290 aa8.23□□□□□ -1.09
SRP54-210ENST00000556380 CD99P14209 185 aa8.23□□□□□ -1.09
SRP54-210ENST00000556380 ANPEPP15144 967 aa8.23□□□□□ -1.09
SRP54-210ENST00000556380 ALOX5APP20292 161 aa8.23□□□□□ -1.09
SRP54-210ENST00000556380 KITLGP21583 273 aa8.23□□□□□ -1.09
SRP54-210ENST00000556380 OPRL1P41146 370 aa8.23□□□□□ -1.09
SRP54-210ENST00000556380 NUDT6P53370 316 aa8.23□□□□□ -1.09
SRP54-210ENST00000556380 SELENOVP59797 346 aa8.23□□□□□ -1.09
SRP54-210ENST00000556380 GGTLC2Q14390 218 aa8.23□□□□□ -1.09
SRP54-210ENST00000556380 MOGQ16653 247 aa8.23□□□□□ -1.09
SRP54-210ENST00000556380 ZIK1Q3SY52 487 aaPredicted RBP8.23□□□□□ -1.09
SRP54-210ENST00000556380 KLHL12Q53G59 568 aa8.23□□□□□ -1.09
SRP54-210ENST00000556380 SLC25A30Q5SVS4 291 aa8.23□□□□□ -1.09
SRP54-210ENST00000556380 NXNL2Q5VZ03 156 aa8.23□□□□□ -1.09
SRP54-210ENST00000556380 FBXW12Q6X9E4 464 aa8.23□□□□□ -1.09
SRP54-210ENST00000556380 ZBTB49Q6ZSB9 765 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms