RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 CDH20Q9HBT6 801 aa8.04□□□□□ -1.12
ACTN1-218ENST00000556343 PNRC2Q9NPJ4 139 aaKnown RBP8.04□□□□□ -1.12
ACTN1-218ENST00000556343 ACOXLQ9NUZ1 547 aa8.04□□□□□ -1.12
ACTN1-218ENST00000556343 ZNF391Q9UJN7 358 aa8.04□□□□□ -1.12
ACTN1-218ENST00000556343 OR52A1Q9UKL2 312 aa8.04□□□□□ -1.12
ACTN1-218ENST00000556343 SSR3Q9UNL2 185 aa8.04□□□□□ -1.12
ACTN1-218ENST00000556343 C5orf49A4QMS7 147 aa8.03□□□□□ -1.12
ACTN1-218ENST00000556343 J3QW42 95 aa8.03□□□□□ -1.12
ACTN1-218ENST00000556343 CASKO14936 926 aa8.03□□□□□ -1.12
ACTN1-218ENST00000556343 MAGEB4O15481 346 aaPredicted RBP8.03□□□□□ -1.12
ACTN1-218ENST00000556343 MTRF1O75570 445 aaKnown RBP8.03□□□□□ -1.12
ACTN1-218ENST00000556343 CLDN14O95500 239 aa8.03□□□□□ -1.12
ACTN1-218ENST00000556343 ABHD16AO95870 558 aa8.03□□□□□ -1.12
ACTN1-218ENST00000556343 LCATP04180 440 aa8.03□□□□□ -1.12
ACTN1-218ENST00000556343 PRB1P04280 392 aa8.03□□□□□ -1.12
ACTN1-218ENST00000556343 ADRA2AP08913 450 aa8.03□□□□□ -1.12
ACTN1-218ENST00000556343 UBCP0CG48 685 aaKnown RBP8.03□□□□□ -1.12
ACTN1-218ENST00000556343 PSKH1P11801 424 aa8.03□□□□□ -1.12
ACTN1-218ENST00000556343 GALP22466 123 aa8.03□□□□□ -1.12
ACTN1-218ENST00000556343 TUBG1P23258 451 aa8.03□□□□□ -1.12
ACTN1-218ENST00000556343 CFL1P23528 166 aaKnown RBP8.03□□□□□ -1.12
ACTN1-218ENST00000556343 GABRA5P31644 462 aa8.03□□□□□ -1.12
ACTN1-218ENST00000556343 PSMB10P40306 273 aa8.03□□□□□ -1.12
ACTN1-218ENST00000556343 GP2P55259 537 aaKnown RBP8.03□□□□□ -1.12
ACTN1-218ENST00000556343 SORDQ00796 357 aa8.03□□□□□ -1.12
ACTN1-218ENST00000556343 SLC3A1Q07837 685 aa8.03□□□□□ -1.12
ACTN1-218ENST00000556343 MALLQ13021 153 aa8.03□□□□□ -1.12
ACTN1-218ENST00000556343 TSC22D1Q15714 1073 aa8.03□□□□□ -1.12
ACTN1-218ENST00000556343 DMKNQ6E0U4 476 aaPredicted RBP8.03□□□□□ -1.12
ACTN1-218ENST00000556343 SATL1Q86VE3 508 aa8.03□□□□□ -1.12
ACTN1-218ENST00000556343 CATSPERDQ86XM0 798 aa8.03□□□□□ -1.12
ACTN1-218ENST00000556343 PHC2Q8IXK0 858 aa8.03□□□□□ -1.12
ACTN1-218ENST00000556343 WDR31Q8NA23 367 aa8.03□□□□□ -1.12
ACTN1-218ENST00000556343 ZNF485Q8NCK3 441 aa8.03□□□□□ -1.12
ACTN1-218ENST00000556343 OR10S1Q8NGN2 331 aa8.03□□□□□ -1.12
ACTN1-218ENST00000556343 OR2G2Q8NGZ5 317 aa8.03□□□□□ -1.12
ACTN1-218ENST00000556343 FGFBP3Q8TAT2 258 aa8.03□□□□□ -1.12
ACTN1-218ENST00000556343 PHYHIPQ92561 330 aa8.03□□□□□ -1.12
ACTN1-218ENST00000556343 SMIM19Q96E16 107 aa8.03□□□□□ -1.12
ACTN1-218ENST00000556343 DOK1Q99704 481 aa8.03□□□□□ -1.12
ACTN1-218ENST00000556343 BCL7BQ9BQE9 202 aa8.03□□□□□ -1.12
ACTN1-218ENST00000556343 MED18Q9BUE0 208 aa8.03□□□□□ -1.12
ACTN1-218ENST00000556343 FAM192AQ9GZU8 254 aa8.03□□□□□ -1.12
ACTN1-218ENST00000556343 PBOV1Q9GZY1 135 aa8.03□□□□□ -1.12
ACTN1-218ENST00000556343 RGCCQ9H4X1 137 aa8.03□□□□□ -1.12
ACTN1-218ENST00000556343 TUBG2Q9NRH3 451 aa8.03□□□□□ -1.12
ACTN1-218ENST00000556343 STUB1Q9UNE7 303 aa8.03□□□□□ -1.12
ACTN1-218ENST00000556343 GSTK1Q9Y2Q3 226 aa8.03□□□□□ -1.12
ACTN1-218ENST00000556343 ZNF281Q9Y2X9 895 aa8.03□□□□□ -1.12
ACTN1-218ENST00000556343 GRIP1Q9Y3R0 1128 aa8.03□□□□□ -1.12
ACTN1-218ENST00000556343 N6AMT1Q9Y5N5 214 aa8.03□□□□□ -1.12
ACTN1-218ENST00000556343 SLC25A15Q9Y619 301 aa8.03□□□□□ -1.12
ACTN1-218ENST00000556343 ESPL1Q14674 2120 aa8.03□□□□□ -1.12
ACTN1-218ENST00000556343 PHF3Q92576 2039 aaKnown RBP8.03□□□□□ -1.12
ACTN1-218ENST00000556343 SHANK1Q9Y566 2161 aa8.03□□□□□ -1.12
ACTN1-218ENST00000556343 SPENQ96T58 3664 aaKnown RBP8.02□□□□□ -1.13
ACTN1-218ENST00000556343 A0A1B0GVI7 797 aa8.02□□□□□ -1.13
ACTN1-218ENST00000556343 VSTM5A8MXK1 200 aa8.02□□□□□ -1.13
ACTN1-218ENST00000556343 TBX1O43435 398 aa8.02□□□□□ -1.13
ACTN1-218ENST00000556343 XRCC2O43543 280 aa8.02□□□□□ -1.13
ACTN1-218ENST00000556343 AIREO43918 545 aa8.02□□□□□ -1.13
ACTN1-218ENST00000556343 GATBO75879 557 aaKnown RBP8.02□□□□□ -1.13
ACTN1-218ENST00000556343 IGKV3-15P01624 115 aa8.02□□□□□ -1.13
ACTN1-218ENST00000556343 ACSM4P0C7M7 580 aa8.02□□□□□ -1.13
ACTN1-218ENST00000556343 ACHEP22303 614 aa8.02□□□□□ -1.13
ACTN1-218ENST00000556343 CRYGSP22914 178 aa8.02□□□□□ -1.13
ACTN1-218ENST00000556343 MAPK3P27361 379 aaPredicted RBP8.02□□□□□ -1.13
ACTN1-218ENST00000556343 APEX1P27695 318 aaKnown RBP8.02□□□□□ -1.13
ACTN1-218ENST00000556343 LIPAP38571 399 aa8.02□□□□□ -1.13
ACTN1-218ENST00000556343 RAD52P43351 418 aa8.02□□□□□ -1.13
ACTN1-218ENST00000556343 UQCRFS1P47985 274 aa8.02□□□□□ -1.13
ACTN1-218ENST00000556343 IDH3GP51553 393 aaPredicted RBP8.02□□□□□ -1.13
ACTN1-218ENST00000556343 GTF2A1P52655 376 aaPredicted RBP8.02□□□□□ -1.13
ACTN1-218ENST00000556343 ZNF121P58317 390 aaPredicted RBP8.02□□□□□ -1.13
ACTN1-218ENST00000556343 TUBA1BP68363 451 aa8.02□□□□□ -1.13
ACTN1-218ENST00000556343 YIF1BQ5BJH7 314 aa8.02□□□□□ -1.13
ACTN1-218ENST00000556343 ALKBH2Q6NS38 261 aa8.02□□□□□ -1.13
ACTN1-218ENST00000556343 TMEM108Q6UXF1 575 aa8.02□□□□□ -1.13
ACTN1-218ENST00000556343 FAM57BQ71RH2 274 aa8.02□□□□□ -1.13
ACTN1-218ENST00000556343 TUBA1AQ71U36 451 aa8.02□□□□□ -1.13
ACTN1-218ENST00000556343 COMMD2Q86X83 199 aa8.02□□□□□ -1.13
ACTN1-218ENST00000556343 ANKRD13BQ86YJ7 626 aa8.02□□□□□ -1.13
ACTN1-218ENST00000556343 CLVS1Q8IUQ0 354 aaPredicted RBP8.02□□□□□ -1.13
ACTN1-218ENST00000556343 ELMOD2Q8IZ81 293 aa8.02□□□□□ -1.13
ACTN1-218ENST00000556343 RFLNBQ8N5W9 214 aa8.02□□□□□ -1.13
ACTN1-218ENST00000556343 ZNF420Q8TAQ5 688 aaPredicted RBP8.02□□□□□ -1.13
ACTN1-218ENST00000556343 GPR148Q8TDV2 347 aa8.02□□□□□ -1.13
ACTN1-218ENST00000556343 AKAP1Q92667 903 aaKnown RBP eCLIP8.02□□□□□ -1.13
ACTN1-218ENST00000556343 GHSRQ92847 366 aa8.02□□□□□ -1.13
ACTN1-218ENST00000556343 APOBEC3DQ96AK3 386 aaPredicted RBP8.02□□□□□ -1.13
ACTN1-218ENST00000556343 YIPF6Q96EC8 236 aa8.02□□□□□ -1.13
ACTN1-218ENST00000556343 C4orf45Q96LM5 186 aa8.02□□□□□ -1.13
ACTN1-218ENST00000556343 SLC24A3Q9HC58 644 aa8.02□□□□□ -1.13
ACTN1-218ENST00000556343 EXOSC4Q9NPD3 245 aaKnown RBP8.02□□□□□ -1.13
ACTN1-218ENST00000556343 BRD7Q9NPI1 651 aa8.02□□□□□ -1.13
ACTN1-218ENST00000556343 NDUFB11Q9NX14 153 aa8.02□□□□□ -1.13
ACTN1-218ENST00000556343 FAM206AQ9NX38 181 aa8.02□□□□□ -1.13
ACTN1-218ENST00000556343 ZNF224Q9NZL3 707 aa8.02□□□□□ -1.13
ACTN1-218ENST00000556343 FRRS1LQ9P0K9 344 aa8.02□□□□□ -1.13
ACTN1-218ENST00000556343 CRNNQ9UBG3 495 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms