RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 ZDHHC11Q9H8X9 412 aa12.96□□□□□ -0.34
VPS33B-205ENST00000556096 LIN7BQ9HAP6 207 aa12.96□□□□□ -0.34
VPS33B-205ENST00000556096 MCTS1Q9ULC4 181 aaKnown RBP12.96□□□□□ -0.34
VPS33B-205ENST00000556096 ETV7Q9Y603 341 aa12.96□□□□□ -0.34
VPS33B-205ENST00000556096 MEGF11A6BM72 1044 aa12.95□□□□□ -0.34
VPS33B-205ENST00000556096 H3BSH0 61 aa12.95□□□□□ -0.34
VPS33B-205ENST00000556096 P2RY10O00398 339 aa12.95□□□□□ -0.34
VPS33B-205ENST00000556096 CEACAM4O75871 244 aa12.95□□□□□ -0.34
VPS33B-205ENST00000556096 ITGB2P05107 769 aa12.95□□□□□ -0.34
VPS33B-205ENST00000556096 CST2P09228 141 aa12.95□□□□□ -0.34
VPS33B-205ENST00000556096 PITPNAQ00169 270 aa12.95□□□□□ -0.34
VPS33B-205ENST00000556096 MADCAM1Q13477 382 aa12.95□□□□□ -0.34
VPS33B-205ENST00000556096 STK11Q15831 433 aa12.95□□□□□ -0.34
VPS33B-205ENST00000556096 TRIQKQ629K1 86 aa12.95□□□□□ -0.34
VPS33B-205ENST00000556096 ZNF837Q96EG3 531 aaPredicted RBP12.95□□□□□ -0.34
VPS33B-205ENST00000556096 WACQ9BTA9 647 aa12.95□□□□□ -0.34
VPS33B-205ENST00000556096 LINC00470Q9BZP3 86 aa12.95□□□□□ -0.34
VPS33B-205ENST00000556096 ABCG5Q9H222 651 aa12.95□□□□□ -0.34
VPS33B-205ENST00000556096 CRLF2Q9HC73 371 aa12.95□□□□□ -0.34
VPS33B-205ENST00000556096 ZNF275Q9NSD4 429 aaPredicted RBP12.95□□□□□ -0.34
VPS33B-205ENST00000556096 PARPBPQ9NWS1 579 aa12.95□□□□□ -0.34
VPS33B-205ENST00000556096 EMC3Q9P0I2 261 aa12.95□□□□□ -0.34
VPS33B-205ENST00000556096 OR5V1Q9UGF6 321 aa12.95□□□□□ -0.34
VPS33B-205ENST00000556096 STEAP1Q9UHE8 339 aa12.95□□□□□ -0.34
VPS33B-205ENST00000556096 CAMK2AQ9UQM7 478 aa12.95□□□□□ -0.34
VPS33B-205ENST00000556096 USP24Q9UPU5 2620 aa12.95□□□□□ -0.34
VPS33B-205ENST00000556096 TRGV5A0A0B4J1U4 118 aa12.94□□□□□ -0.34
VPS33B-205ENST00000556096 ZNF724A8MTY0 619 aa12.94□□□□□ -0.34
VPS33B-205ENST00000556096 K7ENP7 123 aa12.94□□□□□ -0.34
VPS33B-205ENST00000556096 UBL3O95164 117 aa12.94□□□□□ -0.34
VPS33B-205ENST00000556096 CPN1P15169 458 aa12.94□□□□□ -0.34
VPS33B-205ENST00000556096 PRKXP51817 358 aa12.94□□□□□ -0.34
VPS33B-205ENST00000556096 ZNF121P58317 390 aaPredicted RBP12.94□□□□□ -0.34
VPS33B-205ENST00000556096 CCDC92Q53HC0 331 aaPredicted RBP12.94□□□□□ -0.34
VPS33B-205ENST00000556096 INO80CQ6PI98 192 aaPredicted RBP12.94□□□□□ -0.34
VPS33B-205ENST00000556096 CCBE1Q6UXH8 406 aaPredicted RBP12.94□□□□□ -0.34
VPS33B-205ENST00000556096 C19orf18Q8NEA5 215 aa12.94□□□□□ -0.34
VPS33B-205ENST00000556096 DNAAF1Q8NEP3 725 aa12.94□□□□□ -0.34
VPS33B-205ENST00000556096 RAB40AQ8WXH6 277 aa12.94□□□□□ -0.34
VPS33B-205ENST00000556096 GPR35Q9HC97 309 aa12.94□□□□□ -0.34
VPS33B-205ENST00000556096 TMEM38BQ9NVV0 291 aa12.94□□□□□ -0.34
VPS33B-205ENST00000556096 NOSIPQ9Y314 301 aaKnown RBP12.94□□□□□ -0.34
VPS33B-205ENST00000556096 KCNMB2Q9Y691 235 aa12.94□□□□□ -0.34
VPS33B-205ENST00000556096 PTPRQQ9UMZ3 2332 aa12.94□□□□□ -0.34
VPS33B-205ENST00000556096 MGAQ8IWI9 3026 aa12.94□□□□□ -0.34
VPS33B-205ENST00000556096 TNRC6AQ8NDV7 1962 aaKnown RBP12.94□□□□□ -0.34
VPS33B-205ENST00000556096 A0A1B0GTI1 187 aa12.93□□□□□ -0.34
VPS33B-205ENST00000556096 OR6C65A6NJZ3 312 aa12.93□□□□□ -0.34
VPS33B-205ENST00000556096 SLC17A2O00624 439 aa12.93□□□□□ -0.34
VPS33B-205ENST00000556096 PLA2G10O15496 165 aa12.93□□□□□ -0.34
VPS33B-205ENST00000556096 SYT7O43581 403 aa12.93□□□□□ -0.34
VPS33B-205ENST00000556096 MRPL33O75394 65 aaKnown RBP12.93□□□□□ -0.34
VPS33B-205ENST00000556096 APOC1P02654 83 aa12.93□□□□□ -0.34
VPS33B-205ENST00000556096 SPNP16150 400 aa12.93□□□□□ -0.34
VPS33B-205ENST00000556096 OTX1P32242 354 aaPredicted RBP12.93□□□□□ -0.34
VPS33B-205ENST00000556096 CX3CR1P49238 355 aa12.93□□□□□ -0.34
VPS33B-205ENST00000556096 RNPS1Q15287 305 aaKnown RBP12.93□□□□□ -0.34
VPS33B-205ENST00000556096 TAB1Q15750 504 aa12.93□□□□□ -0.34
VPS33B-205ENST00000556096 C11orf91Q3C1V1 193 aa12.93□□□□□ -0.34
VPS33B-205ENST00000556096 RNFT1Q5M7Z0 435 aa12.93□□□□□ -0.34
VPS33B-205ENST00000556096 ELFN2Q5R3F8 820 aa12.93□□□□□ -0.34
VPS33B-205ENST00000556096 HACD4Q5VWC8 232 aa12.93□□□□□ -0.34
VPS33B-205ENST00000556096 GLT8D1Q68CQ7 371 aa12.93□□□□□ -0.34
VPS33B-205ENST00000556096 FAM166AQ6J272 317 aa12.93□□□□□ -0.34
VPS33B-205ENST00000556096 LINGO2Q7L985 606 aa12.93□□□□□ -0.34
VPS33B-205ENST00000556096 CMTM4Q8IZR5 234 aa12.93□□□□□ -0.34
VPS33B-205ENST00000556096 LRRC18Q8N456 261 aa12.93□□□□□ -0.34
VPS33B-205ENST00000556096 ZNF283Q8N7M2 679 aa12.93□□□□□ -0.34
VPS33B-205ENST00000556096 SLC25A38Q96DW6 304 aa12.93□□□□□ -0.34
VPS33B-205ENST00000556096 FBXO17Q96EF6 278 aa12.93□□□□□ -0.34
VPS33B-205ENST00000556096 ABHD1Q96SE0 405 aa12.93□□□□□ -0.34
VPS33B-205ENST00000556096 DEFB127Q9H1M4 99 aa12.93□□□□□ -0.34
VPS33B-205ENST00000556096 LDAHQ9H6V9 325 aa12.93□□□□□ -0.34
VPS33B-205ENST00000556096 BCO1Q9HAY6 547 aa12.93□□□□□ -0.34
VPS33B-205ENST00000556096 TAS2R4Q9NYW5 299 aa12.93□□□□□ -0.34
VPS33B-205ENST00000556096 LIPGQ9Y5X9 500 aa12.93□□□□□ -0.34
VPS33B-205ENST00000556096 PHF3Q92576 2039 aaKnown RBP12.93□□□□□ -0.34
VPS33B-205ENST00000556096 TRAV17A0A0B4J275 112 aa12.93□□□□□ -0.34
VPS33B-205ENST00000556096 A0A1B0GVI7 797 aa12.93□□□□□ -0.34
VPS33B-205ENST00000556096 CTDSPLO15194 276 aa12.93□□□□□ -0.34
VPS33B-205ENST00000556096 DOK2O60496 412 aa12.93□□□□□ -0.34
VPS33B-205ENST00000556096 TPPPO94811 219 aa12.93□□□□□ -0.34
VPS33B-205ENST00000556096 CCL1P22362 96 aa12.93□□□□□ -0.34
VPS33B-205ENST00000556096 RFX2P48378 723 aa12.93□□□□□ -0.34
VPS33B-205ENST00000556096 MMP15P51511 669 aa12.93□□□□□ -0.34
VPS33B-205ENST00000556096 CLDN12P56749 244 aa12.93□□□□□ -0.34
VPS33B-205ENST00000556096 NRN1LQ496H8 165 aa12.93□□□□□ -0.34
VPS33B-205ENST00000556096 PRSS45Q7RTY3 260 aa12.93□□□□□ -0.34
VPS33B-205ENST00000556096 LUZP2Q86TE4 346 aa12.93□□□□□ -0.34
VPS33B-205ENST00000556096 SERPINA12Q8IW75 414 aa12.93□□□□□ -0.34
VPS33B-205ENST00000556096 OR8B12Q8NGG6 310 aa12.93□□□□□ -0.34
VPS33B-205ENST00000556096 WDYHV1Q96HA8 205 aa12.93□□□□□ -0.34
VPS33B-205ENST00000556096 FOXB1Q99853 325 aa12.93□□□□□ -0.34
VPS33B-205ENST00000556096 SLC22A4Q9H015 551 aa12.93□□□□□ -0.34
VPS33B-205ENST00000556096 SLCO5A1Q9H2Y9 848 aa12.93□□□□□ -0.34
VPS33B-205ENST00000556096 CLEC4AQ9UMR7 237 aa12.93□□□□□ -0.34
VPS33B-205ENST00000556096 CSAG2Q9Y5P2 127 aa12.93□□□□□ -0.34
VPS33B-205ENST00000556096 A0A1B0GVC2 190 aa12.92□□□□□ -0.34
VPS33B-205ENST00000556096 A6NIN4 97 aa12.92□□□□□ -0.34
VPS33B-205ENST00000556096 ART1P52961 327 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms