RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 RFLNBQ8N5W9 214 aa10.8□□□□□ -0.68
SHMT2-221ENST00000555773 YIPF7Q8N8F6 280 aa10.8□□□□□ -0.68
SHMT2-221ENST00000555773 ZNF799Q96GE5 643 aa10.8□□□□□ -0.68
SHMT2-221ENST00000555773 C4orf45Q96LM5 186 aa10.8□□□□□ -0.68
SHMT2-221ENST00000555773 COG8Q96MW5 612 aa10.8□□□□□ -0.68
SHMT2-221ENST00000555773 PSMG3-AS1Q96PY0 264 aa10.8□□□□□ -0.68
SHMT2-221ENST00000555773 CCDC90BQ9GZT6 254 aa10.8□□□□□ -0.68
SHMT2-221ENST00000555773 ZNF696Q9H7X3 374 aa10.8□□□□□ -0.68
SHMT2-221ENST00000555773 TUBG2Q9NRH3 451 aa10.8□□□□□ -0.68
SHMT2-221ENST00000555773 TBCCD1Q9NVR7 557 aa10.8□□□□□ -0.68
SHMT2-221ENST00000555773 BABAM2Q9NXR7 383 aa10.8□□□□□ -0.68
SHMT2-221ENST00000555773 CLEC2DQ9UHP7 191 aa10.8□□□□□ -0.68
SHMT2-221ENST00000555773 GRIP1Q9Y3R0 1128 aa10.8□□□□□ -0.68
SHMT2-221ENST00000555773 LRP12Q9Y561 859 aa10.8□□□□□ -0.68
SHMT2-221ENST00000555773 SNX5Q9Y5X3 404 aa10.8□□□□□ -0.68
SHMT2-221ENST00000555773 IGHV2OR16-5A0A0B4J2B6 119 aa10.79□□□□□ -0.68
SHMT2-221ENST00000555773 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-221ENST00000555773 J3QLW9 94 aa10.79□□□□□ -0.68
SHMT2-221ENST00000555773 PSMD9O00233 223 aa10.79□□□□□ -0.68
SHMT2-221ENST00000555773 MYL12BO14950 172 aa10.79□□□□□ -0.68
SHMT2-221ENST00000555773 MAGEB4O15481 346 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-221ENST00000555773 CD3EP07766 207 aa10.79□□□□□ -0.68
SHMT2-221ENST00000555773 ADRA2AP08913 450 aa10.79□□□□□ -0.68
SHMT2-221ENST00000555773 DBHP09172 617 aa10.79□□□□□ -0.68
SHMT2-221ENST00000555773 ZNF19P17023 458 aa10.79□□□□□ -0.68
SHMT2-221ENST00000555773 PRKXP51817 358 aa10.79□□□□□ -0.68
SHMT2-221ENST00000555773 GBX2P52951 348 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-221ENST00000555773 OR12D2P58182 307 aa10.79□□□□□ -0.68
SHMT2-221ENST00000555773 BSPH1Q075Z2 132 aa10.79□□□□□ -0.68
SHMT2-221ENST00000555773 ZNF829Q3KNS6 432 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-221ENST00000555773 TP53I3Q53FA7 332 aa10.79□□□□□ -0.68
SHMT2-221ENST00000555773 LIPNQ5VXI9 398 aa10.79□□□□□ -0.68
SHMT2-221ENST00000555773 ZNF544Q6NX49 715 aa10.79□□□□□ -0.68
SHMT2-221ENST00000555773 ZNF773Q6PK81 442 aa10.79□□□□□ -0.68
SHMT2-221ENST00000555773 COLCA1Q6ZS62 124 aa10.79□□□□□ -0.68
SHMT2-221ENST00000555773 MYPOPQ86VE0 399 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-221ENST00000555773 SVOPQ8N4V2 548 aa10.79□□□□□ -0.68
SHMT2-221ENST00000555773 ZNF283Q8N7M2 679 aa10.79□□□□□ -0.68
SHMT2-221ENST00000555773 SLC7A6Q92536 515 aa10.79□□□□□ -0.68
SHMT2-221ENST00000555773 SGCDQ92629 289 aa10.79□□□□□ -0.68
SHMT2-221ENST00000555773 PLPPR2Q96GM1 343 aa10.79□□□□□ -0.68
SHMT2-221ENST00000555773 C4orf36Q96KX1 117 aa10.79□□□□□ -0.68
SHMT2-221ENST00000555773 MND1Q9BWT6 205 aa10.79□□□□□ -0.68
SHMT2-221ENST00000555773 C1QTNF5Q9BXJ0 243 aa10.79□□□□□ -0.68
SHMT2-221ENST00000555773 GNG8Q9UK08 70 aa10.79□□□□□ -0.68
SHMT2-221ENST00000555773 RTTNQ86VV8 2226 aa10.78□□□□□ -0.68
SHMT2-221ENST00000555773 USP9YO00507 2555 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-221ENST00000555773 A0A087WXM4 84 aa10.78□□□□□ -0.68
SHMT2-221ENST00000555773 TMEM269A0A1B0GVZ9 245 aa10.78□□□□□ -0.68
SHMT2-221ENST00000555773 A1L4Q6 167 aa10.78□□□□□ -0.68
SHMT2-221ENST00000555773 VSTM5A8MXK1 200 aa10.78□□□□□ -0.68
SHMT2-221ENST00000555773 DEFB108AA8MXU0 73 aa10.78□□□□□ -0.68
SHMT2-221ENST00000555773 ABCD4O14678 606 aa10.78□□□□□ -0.68
SHMT2-221ENST00000555773 MT-ND2P03891 347 aa10.78□□□□□ -0.68
SHMT2-221ENST00000555773 HTR1AP08908 422 aa10.78□□□□□ -0.68
SHMT2-221ENST00000555773 CCL2P13500 99 aa10.78□□□□□ -0.68
SHMT2-221ENST00000555773 COX6B1P14854 86 aa10.78□□□□□ -0.68
SHMT2-221ENST00000555773 NR4A1P22736 598 aa10.78□□□□□ -0.68
SHMT2-221ENST00000555773 CALCRP30988 508 aa10.78□□□□□ -0.68
SHMT2-221ENST00000555773 SLC6A9P48067 706 aa10.78□□□□□ -0.68
SHMT2-221ENST00000555773 CX3CR1P49238 355 aa10.78□□□□□ -0.68
SHMT2-221ENST00000555773 UCP2P55851 309 aa10.78□□□□□ -0.68
SHMT2-221ENST00000555773 WNT4P56705 351 aa10.78□□□□□ -0.68
SHMT2-221ENST00000555773 PSMA6P60900 246 aaKnown RBP10.78□□□□□ -0.68
SHMT2-221ENST00000555773 CCDC58Q4VC31 144 aa10.78□□□□□ -0.68
SHMT2-221ENST00000555773 FDX2Q6P4F2 183 aa10.78□□□□□ -0.68
SHMT2-221ENST00000555773 PRSS45Q7RTY3 260 aa10.78□□□□□ -0.68
SHMT2-221ENST00000555773 SPARTQ8N0X7 666 aa10.78□□□□□ -0.68
SHMT2-221ENST00000555773 ZNF485Q8NCK3 441 aa10.78□□□□□ -0.68
SHMT2-221ENST00000555773 OR52H1Q8NGJ2 320 aa10.78□□□□□ -0.68
SHMT2-221ENST00000555773 OR5L1Q8NGL2 311 aa10.78□□□□□ -0.68
SHMT2-221ENST00000555773 SPRYD4Q8WW59 207 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-221ENST00000555773 APOBEC3DQ96AK3 386 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-221ENST00000555773 PELI1Q96FA3 418 aa10.78□□□□□ -0.68
SHMT2-221ENST00000555773 DOK1Q99704 481 aa10.78□□□□□ -0.68
SHMT2-221ENST00000555773 TMEM204Q9BSN7 226 aa10.78□□□□□ -0.68
SHMT2-221ENST00000555773 TTTY10Q9BZA0 68 aa10.78□□□□□ -0.68
SHMT2-221ENST00000555773 BCL2L14Q9BZR8 327 aa10.78□□□□□ -0.68
SHMT2-221ENST00000555773 MOB1AQ9H8S9 216 aa10.78□□□□□ -0.68
SHMT2-221ENST00000555773 ISG20L2Q9H9L3 353 aaKnown RBP10.78□□□□□ -0.68
SHMT2-221ENST00000555773 R4GMQ9 66 aa10.78□□□□□ -0.68
SHMT2-221ENST00000555773 COL12A1Q99715 3063 aa10.78□□□□□ -0.68
SHMT2-221ENST00000555773 PRR14LQ5THK1 2151 aa10.77□□□□□ -0.68
SHMT2-221ENST00000555773 SRSF10O75494 262 aaKnown RBP10.77□□□□□ -0.69
SHMT2-221ENST00000555773 RPP14O95059 124 aaKnown RBP10.77□□□□□ -0.69
SHMT2-221ENST00000555773 LCATP04180 440 aa10.77□□□□□ -0.69
SHMT2-221ENST00000555773 ANXA2P07355 339 aaKnown RBP10.77□□□□□ -0.69
SHMT2-221ENST00000555773 RPSAP08865 295 aaKnown RBP10.77□□□□□ -0.69
SHMT2-221ENST00000555773 WNT5AP41221 380 aa10.77□□□□□ -0.69
SHMT2-221ENST00000555773 TGM4P49221 684 aa10.77□□□□□ -0.69
SHMT2-221ENST00000555773 CCR9P51686 369 aa10.77□□□□□ -0.69
SHMT2-221ENST00000555773 CDH15P55291 814 aa10.77□□□□□ -0.69
SHMT2-221ENST00000555773 ZNF121P58317 390 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-221ENST00000555773 TAS2R43P59537 309 aa10.77□□□□□ -0.69
SHMT2-221ENST00000555773 BDH1Q02338 343 aa10.77□□□□□ -0.69
SHMT2-221ENST00000555773 EMX1Q04741 257 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-221ENST00000555773 HGFACQ04756 655 aa10.77□□□□□ -0.69
SHMT2-221ENST00000555773 ACSM1Q08AH1 577 aa10.77□□□□□ -0.69
SHMT2-221ENST00000555773 SPHARQ15513 63 aa10.77□□□□□ -0.69
SHMT2-221ENST00000555773 TBCEQ15813 527 aaPredicted RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms