RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 CYSLTR2Q9NS75 346 aa11.68□□□□□ -0.54
SHMT2-219ENST00000555563 ZNF275Q9NSD4 429 aaPredicted RBP11.68□□□□□ -0.54
SHMT2-219ENST00000555563 DDX28Q9NUL7 540 aaKnown RBP11.68□□□□□ -0.54
SHMT2-219ENST00000555563 PRR23D1E9PI22 279 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-219ENST00000555563 F5H5K5 113 aa11.67□□□□□ -0.54
SHMT2-219ENST00000555563 LILRA1O75019 489 aa11.67□□□□□ -0.54
SHMT2-219ENST00000555563 TACSTD2P09758 323 aa11.67□□□□□ -0.54
SHMT2-219ENST00000555563 PRR23D2P0DMB1 279 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-219ENST00000555563 FCGR1AP12314 374 aa11.67□□□□□ -0.54
SHMT2-219ENST00000555563 BLVRAP53004 296 aa11.67□□□□□ -0.54
SHMT2-219ENST00000555563 PPP2R2BQ00005 443 aa11.67□□□□□ -0.54
SHMT2-219ENST00000555563 HLXQ14774 488 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-219ENST00000555563 FAM209AQ5JX71 171 aa11.67□□□□□ -0.54
SHMT2-219ENST00000555563 C6orf52Q5T4I8 152 aa11.67□□□□□ -0.54
SHMT2-219ENST00000555563 COLCA1Q6ZS62 124 aa11.67□□□□□ -0.54
SHMT2-219ENST00000555563 USP51Q70EK9 711 aa11.67□□□□□ -0.54
SHMT2-219ENST00000555563 HIPK1Q86Z02 1210 aa11.67□□□□□ -0.54
SHMT2-219ENST00000555563 PARP8Q8N3A8 854 aa11.67□□□□□ -0.54
SHMT2-219ENST00000555563 LRTOMTQ8WZ04 291 aa11.67□□□□□ -0.54
SHMT2-219ENST00000555563 PTP4A1Q93096 173 aa11.67□□□□□ -0.54
SHMT2-219ENST00000555563 INTS14Q96SY0 518 aa11.67□□□□□ -0.54
SHMT2-219ENST00000555563 GABARAPL1Q9H0R8 117 aa11.67□□□□□ -0.54
SHMT2-219ENST00000555563 YAE1D1Q9NRH1 226 aa11.67□□□□□ -0.54
SHMT2-219ENST00000555563 DECR2Q9NUI1 292 aa11.67□□□□□ -0.54
SHMT2-219ENST00000555563 YLPM1P49750 1951 aaKnown RBP11.67□□□□□ -0.54
SHMT2-219ENST00000555563 ABCA1O95477 2261 aa11.66□□□□□ -0.54
SHMT2-219ENST00000555563 IGHV1-69-2A0A0G2JMI3 117 aa11.66□□□□□ -0.54
SHMT2-219ENST00000555563 G3V2T6 193 aa11.66□□□□□ -0.54
SHMT2-219ENST00000555563 M0R135 149 aa11.66□□□□□ -0.54
SHMT2-219ENST00000555563 ZNF593O00488 134 aaPredicted RBP11.66□□□□□ -0.54
SHMT2-219ENST00000555563 TLX2O43763 284 aaPredicted RBP11.66□□□□□ -0.54
SHMT2-219ENST00000555563 MITFO75030 526 aaPredicted RBP11.66□□□□□ -0.54
SHMT2-219ENST00000555563 GLCEO94923 617 aa11.66□□□□□ -0.54
SHMT2-219ENST00000555563 HMGN1P05114 100 aa11.66□□□□□ -0.54
SHMT2-219ENST00000555563 ADH4P08319 380 aa11.66□□□□□ -0.54
SHMT2-219ENST00000555563 RAC2P15153 192 aa11.66□□□□□ -0.54
SHMT2-219ENST00000555563 GSTT1P30711 240 aa11.66□□□□□ -0.54
SHMT2-219ENST00000555563 IL2RGP31785 369 aa11.66□□□□□ -0.54
SHMT2-219ENST00000555563 LIPAP38571 399 aa11.66□□□□□ -0.54
SHMT2-219ENST00000555563 GPR6P46095 362 aaPredicted RBP11.66□□□□□ -0.54
SHMT2-219ENST00000555563 CHN2P52757 468 aa11.66□□□□□ -0.54
SHMT2-219ENST00000555563 PRSS12P56730 875 aa11.66□□□□□ -0.54
SHMT2-219ENST00000555563 ACTR3P61158 418 aa11.66□□□□□ -0.54
SHMT2-219ENST00000555563 KPNB1Q14974 876 aaKnown RBP11.66□□□□□ -0.54
SHMT2-219ENST00000555563 TEX30Q5JUR7 227 aa11.66□□□□□ -0.54
SHMT2-219ENST00000555563 FBXW12Q6X9E4 464 aa11.66□□□□□ -0.54
SHMT2-219ENST00000555563 Q6ZR03 302 aa11.66□□□□□ -0.54
SHMT2-219ENST00000555563 NAA40Q86UY6 237 aa11.66□□□□□ -0.54
SHMT2-219ENST00000555563 ZDHHC13Q8IUH4 622 aa11.66□□□□□ -0.54
SHMT2-219ENST00000555563 ERI1Q8IV48 349 aaKnown RBP11.66□□□□□ -0.54
SHMT2-219ENST00000555563 BBS1Q8NFJ9 593 aa11.66□□□□□ -0.54
SHMT2-219ENST00000555563 OR5L1Q8NGL2 311 aa11.66□□□□□ -0.54
SHMT2-219ENST00000555563 OR6N2Q8NGY6 317 aa11.66□□□□□ -0.54
SHMT2-219ENST00000555563 ST7LQ8TDW4 575 aa11.66□□□□□ -0.54
SHMT2-219ENST00000555563 PYDC1Q8WXC3 89 aa11.66□□□□□ -0.54
SHMT2-219ENST00000555563 SPTSSAQ969W0 71 aa11.66□□□□□ -0.54
SHMT2-219ENST00000555563 HAVCR1Q96D42 359 aa11.66□□□□□ -0.54
SHMT2-219ENST00000555563 SLAMF6Q96DU3 332 aa11.66□□□□□ -0.54
SHMT2-219ENST00000555563 ZMYND19Q96E35 227 aaPredicted RBP11.66□□□□□ -0.54
SHMT2-219ENST00000555563 ZNF799Q96GE5 643 aa11.66□□□□□ -0.54
SHMT2-219ENST00000555563 COPS4Q9BT78 406 aa11.66□□□□□ -0.54
SHMT2-219ENST00000555563 SOX7Q9BT81 388 aa11.66□□□□□ -0.54
SHMT2-219ENST00000555563 C1QTNF5Q9BXJ0 243 aa11.66□□□□□ -0.54
SHMT2-219ENST00000555563 OR51V1Q9H2C8 321 aa11.66□□□□□ -0.54
SHMT2-219ENST00000555563 MARCH7Q9H992 704 aa11.66□□□□□ -0.54
SHMT2-219ENST00000555563 KRT84Q9NSB2 600 aa11.66□□□□□ -0.54
SHMT2-219ENST00000555563 CACNG2Q9Y698 323 aa11.66□□□□□ -0.54
SHMT2-219ENST00000555563 TLN2Q9Y4G6 2542 aa11.65□□□□□ -0.54
SHMT2-219ENST00000555563 EBAG9O00559 213 aa11.65□□□□□ -0.54
SHMT2-219ENST00000555563 PRODHO43272 600 aa11.65□□□□□ -0.54
SHMT2-219ENST00000555563 CD55P08174 381 aa11.65□□□□□ -0.54
SHMT2-219ENST00000555563 ANOS1P23352 680 aa11.65□□□□□ -0.54
SHMT2-219ENST00000555563 OTX1P32242 354 aaPredicted RBP11.65□□□□□ -0.54
SHMT2-219ENST00000555563 CRYBB2P43320 205 aa11.65□□□□□ -0.54
SHMT2-219ENST00000555563 SLC6A9P48067 706 aa11.65□□□□□ -0.54
SHMT2-219ENST00000555563 GZMKP49863 264 aa11.65□□□□□ -0.54
SHMT2-219ENST00000555563 CRISP1P54107 249 aa11.65□□□□□ -0.54
SHMT2-219ENST00000555563 TPTEP56180 551 aa11.65□□□□□ -0.54
SHMT2-219ENST00000555563 TNFAIP6P98066 277 aaPredicted RBP11.65□□□□□ -0.54
SHMT2-219ENST00000555563 EIF2B1Q14232 305 aaKnown RBP11.65□□□□□ -0.54
SHMT2-219ENST00000555563 SPRNQ5BIV9 151 aa11.65□□□□□ -0.54
SHMT2-219ENST00000555563 KDM4DQ6B0I6 523 aa11.65□□□□□ -0.54
SHMT2-219ENST00000555563 CYB5R2Q6BCY4 276 aa11.65□□□□□ -0.54
SHMT2-219ENST00000555563 SPATC1Q76KD6 591 aa11.65□□□□□ -0.54
SHMT2-219ENST00000555563 DPY19L4Q7Z388 723 aa11.65□□□□□ -0.54
SHMT2-219ENST00000555563 CPOQ8IVL8 374 aa11.65□□□□□ -0.54
SHMT2-219ENST00000555563 TIGD4Q8IY51 512 aa11.65□□□□□ -0.54
SHMT2-219ENST00000555563 OR5AS1Q8N127 324 aa11.65□□□□□ -0.54
SHMT2-219ENST00000555563 ELMOD3Q96FG2 381 aa11.65□□□□□ -0.54
SHMT2-219ENST00000555563 PLEKHA8Q96JA3 519 aa11.65□□□□□ -0.54
SHMT2-219ENST00000555563 DIRC2Q96SL1 478 aa11.65□□□□□ -0.54
SHMT2-219ENST00000555563 TEX12Q9BXU0 123 aa11.65□□□□□ -0.54
SHMT2-219ENST00000555563 SEMA6AQ9H2E6 1030 aa11.65□□□□□ -0.54
SHMT2-219ENST00000555563 NARFLQ9H6Q4 476 aa11.65□□□□□ -0.54
SHMT2-219ENST00000555563 ZDHHC8Q9ULC8 765 aa11.65□□□□□ -0.54
SHMT2-219ENST00000555563 TANC2Q9HCD6 1990 aa11.65□□□□□ -0.55
SHMT2-219ENST00000555563 HIVEP2P31629 2446 aa11.65□□□□□ -0.55
SHMT2-219ENST00000555563 NSD1Q96L73 2696 aaPredicted RBP11.64□□□□□ -0.55
SHMT2-219ENST00000555563 C5orf63A6NC05 138 aa11.64□□□□□ -0.55
SHMT2-219ENST00000555563 A8MV72 311 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms