RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 MEP1BQ16820 701 aa10.01□□□□□ -0.81
VRK1-204ENST00000555351 PCK2Q16822 640 aa10.01□□□□□ -0.81
VRK1-204ENST00000555351 TMEM155Q4W5P6 130 aa10.01□□□□□ -0.81
VRK1-204ENST00000555351 TEX30Q5JUR7 227 aa10.01□□□□□ -0.81
VRK1-204ENST00000555351 AVPI1Q5T686 147 aa10.01□□□□□ -0.81
VRK1-204ENST00000555351 RINLQ6ZS11 566 aa10.01□□□□□ -0.81
VRK1-204ENST00000555351 IL17RELQ6ZVW7 336 aa10.01□□□□□ -0.81
VRK1-204ENST00000555351 AQP12AQ8IXF9 295 aa10.01□□□□□ -0.81
VRK1-204ENST00000555351 PHC2Q8IXK0 858 aa10.01□□□□□ -0.81
VRK1-204ENST00000555351 SPICQ8N5J4 248 aa10.01□□□□□ -0.81
VRK1-204ENST00000555351 CELF2-AS1Q8N7Q2 184 aa10.01□□□□□ -0.81
VRK1-204ENST00000555351 AQP11Q8NBQ7 271 aa10.01□□□□□ -0.81
VRK1-204ENST00000555351 OR2T33Q8NG76 320 aa10.01□□□□□ -0.81
VRK1-204ENST00000555351 OR2Z1Q8NG97 314 aa10.01□□□□□ -0.81
VRK1-204ENST00000555351 OR4M2Q8NGB6 313 aa10.01□□□□□ -0.81
VRK1-204ENST00000555351 OR9Q2Q8NGE9 314 aa10.01□□□□□ -0.81
VRK1-204ENST00000555351 SLC7A6Q92536 515 aa10.01□□□□□ -0.81
VRK1-204ENST00000555351 LRGUKQ96M69 825 aa10.01□□□□□ -0.81
VRK1-204ENST00000555351 ZNF582Q96NG8 517 aaPredicted RBP10.01□□□□□ -0.81
VRK1-204ENST00000555351 PITX2Q99697 317 aa10.01□□□□□ -0.81
VRK1-204ENST00000555351 GAL3ST1Q99999 423 aa10.01□□□□□ -0.81
VRK1-204ENST00000555351 SLC30A2Q9BRI3 323 aa10.01□□□□□ -0.81
VRK1-204ENST00000555351 RBM4Q9BWF3 364 aaKnown RBP10.01□□□□□ -0.81
VRK1-204ENST00000555351 HCAR1Q9BXC0 346 aa10.01□□□□□ -0.81
VRK1-204ENST00000555351 NMNAT2Q9BZQ4 307 aa10.01□□□□□ -0.81
VRK1-204ENST00000555351 EGLN3Q9H6Z9 239 aa10.01□□□□□ -0.81
VRK1-204ENST00000555351 PNRC2Q9NPJ4 139 aaKnown RBP10.01□□□□□ -0.81
VRK1-204ENST00000555351 DDX28Q9NUL7 540 aaKnown RBP10.01□□□□□ -0.81
VRK1-204ENST00000555351 TMEM106BQ9NUM4 274 aa10.01□□□□□ -0.81
VRK1-204ENST00000555351 METRNQ9UJH8 293 aa10.01□□□□□ -0.81
VRK1-204ENST00000555351 PPP1R3CQ9UQK1 317 aa10.01□□□□□ -0.81
VRK1-204ENST00000555351 POLR3KQ9Y2Y1 108 aaPredicted RBP10.01□□□□□ -0.81
VRK1-204ENST00000555351 SAMHD1Q9Y3Z3 626 aaKnown RBP10.01□□□□□ -0.81
VRK1-204ENST00000555351 NPTNQ9Y639 398 aa10.01□□□□□ -0.81
VRK1-204ENST00000555351 CUBNO60494 3623 aa10□□□□□ -0.81
VRK1-204ENST00000555351 TCF21O43680 179 aa10□□□□□ -0.81
VRK1-204ENST00000555351 PLPP2O43688 288 aa10□□□□□ -0.81
VRK1-204ENST00000555351 GPANK1O95872 356 aa10□□□□□ -0.81
VRK1-204ENST00000555351 IFNGP01579 166 aa10□□□□□ -0.81
VRK1-204ENST00000555351 IGHV2-70P01814 119 aa10□□□□□ -0.81
VRK1-204ENST00000555351 HLA-DQA2P01906 255 aa10□□□□□ -0.81
VRK1-204ENST00000555351 OTX1P32242 354 aaPredicted RBP10□□□□□ -0.81
VRK1-204ENST00000555351 SRP9P49458 86 aaKnown RBP10□□□□□ -0.81
VRK1-204ENST00000555351 TPTEP56180 551 aa10□□□□□ -0.81
VRK1-204ENST00000555351 MALLQ13021 153 aa10□□□□□ -0.81
VRK1-204ENST00000555351 ZNF181Q2M3W8 571 aa10□□□□□ -0.81
VRK1-204ENST00000555351 CLEC12AQ5QGZ9 265 aa10□□□□□ -0.81
VRK1-204ENST00000555351 SLC35F1Q5T1Q4 408 aa10□□□□□ -0.81
VRK1-204ENST00000555351 CORO6Q6QEF8 472 aa10□□□□□ -0.81
VRK1-204ENST00000555351 CFAP77Q6ZQR2 320 aa10□□□□□ -0.81
VRK1-204ENST00000555351 LRRC28Q86X40 367 aaPredicted RBP10□□□□□ -0.81
VRK1-204ENST00000555351 MUC20Q8N307 709 aaPredicted RBP10□□□□□ -0.81
VRK1-204ENST00000555351 PROKR2Q8NFJ6 384 aa10□□□□□ -0.81
VRK1-204ENST00000555351 OR8D4Q8NGM9 314 aa10□□□□□ -0.81
VRK1-204ENST00000555351 ZFAND2BQ8WV99 257 aa10□□□□□ -0.81
VRK1-204ENST00000555351 SPTSSAQ969W0 71 aa10□□□□□ -0.81
VRK1-204ENST00000555351 ERGIC1Q969X5 290 aa10□□□□□ -0.81
VRK1-204ENST00000555351 PLA2G12AQ9BZM1 189 aa10□□□□□ -0.81
VRK1-204ENST00000555351 SLC22A4Q9H015 551 aa10□□□□□ -0.81
VRK1-204ENST00000555351 TBC1D23Q9NUY8 699 aa10□□□□□ -0.81
VRK1-204ENST00000555351 MRPL22Q9NWU5 206 aaKnown RBP10□□□□□ -0.81
VRK1-204ENST00000555351 FAM53CQ9NYF3 392 aa10□□□□□ -0.81
VRK1-204ENST00000555351 NOP16Q9Y3C1 178 aaKnown RBP10□□□□□ -0.81
VRK1-204ENST00000555351 FOXH1O75593 365 aa9.99□□□□□ -0.81
VRK1-204ENST00000555351 FMO3P31513 532 aa9.99□□□□□ -0.81
VRK1-204ENST00000555351 GATA4P43694 442 aa9.99□□□□□ -0.81
VRK1-204ENST00000555351 KRTAP24-1Q3LI83 254 aa9.99□□□□□ -0.81
VRK1-204ENST00000555351 DNAL1Q4LDG9 190 aa9.99□□□□□ -0.81
VRK1-204ENST00000555351 OTPQ5XKR4 325 aa9.99□□□□□ -0.81
VRK1-204ENST00000555351 OR2T2Q6IF00 324 aa9.99□□□□□ -0.81
VRK1-204ENST00000555351 SHQ1Q6PI26 577 aaKnown RBP9.99□□□□□ -0.81
VRK1-204ENST00000555351 DRAM2Q6UX65 266 aa9.99□□□□□ -0.81
VRK1-204ENST00000555351 RHOUQ7L0Q8 258 aa9.99□□□□□ -0.81
VRK1-204ENST00000555351 TRPM8Q7Z2W7 1104 aa9.99□□□□□ -0.81
VRK1-204ENST00000555351 KLHL36Q8N4N3 616 aa9.99□□□□□ -0.81
VRK1-204ENST00000555351 SLC37A3Q8NCC5 494 aa9.99□□□□□ -0.81
VRK1-204ENST00000555351 ST7LQ8TDW4 575 aa9.99□□□□□ -0.81
VRK1-204ENST00000555351 ITLN1Q8WWA0 313 aa9.99□□□□□ -0.81
VRK1-204ENST00000555351 MAP6Q96JE9 813 aa9.99□□□□□ -0.81
VRK1-204ENST00000555351 OR2V2Q96R30 315 aa9.99□□□□□ -0.81
VRK1-204ENST00000555351 SIGLEC11Q96RL6 698 aa9.99□□□□□ -0.81
VRK1-204ENST00000555351 TSSK6Q9BXA6 273 aa9.99□□□□□ -0.81
VRK1-204ENST00000555351 OPA3Q9H6K4 179 aa9.99□□□□□ -0.81
VRK1-204ENST00000555351 GCM1Q9NP62 436 aa9.99□□□□□ -0.81
VRK1-204ENST00000555351 CMC2Q9NRP2 79 aa9.99□□□□□ -0.81
VRK1-204ENST00000555351 VNN3Q9NY84 501 aa9.99□□□□□ -0.81
VRK1-204ENST00000555351 PTTG3PQ9NZH4 202 aa9.99□□□□□ -0.81
VRK1-204ENST00000555351 RIIAD1A6NNX1 92 aa9.98□□□□□ -0.81
VRK1-204ENST00000555351 A8MXK9 166 aa9.98□□□□□ -0.81
VRK1-204ENST00000555351 F5H5K5 113 aa9.98□□□□□ -0.81
VRK1-204ENST00000555351 M0R135 149 aa9.98□□□□□ -0.81
VRK1-204ENST00000555351 CST1P01037 141 aa9.98□□□□□ -0.81
VRK1-204ENST00000555351 LCATP04180 440 aa9.98□□□□□ -0.81
VRK1-204ENST00000555351 ZNF3P17036 446 aa9.98□□□□□ -0.81
VRK1-204ENST00000555351 GRK5P34947 590 aa9.98□□□□□ -0.81
VRK1-204ENST00000555351 MDH2P40926 338 aaKnown RBP9.98□□□□□ -0.81
VRK1-204ENST00000555351 ENTPD1P49961 510 aa9.98□□□□□ -0.81
VRK1-204ENST00000555351 ERFP50548 548 aa9.98□□□□□ -0.81
VRK1-204ENST00000555351 BTG1P62324 171 aa9.98□□□□□ -0.81
VRK1-204ENST00000555351 GK2Q14410 553 aaPredicted RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms