RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 KRT77Q7Z794 578 aa10.93□□□□□ -0.66
SYNE2-219ENST00000555323 NAA40Q86UY6 237 aa10.93□□□□□ -0.66
SYNE2-219ENST00000555323 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.93□□□□□ -0.66
SYNE2-219ENST00000555323 RFLNBQ8N5W9 214 aa10.93□□□□□ -0.66
SYNE2-219ENST00000555323 ZNF611Q8N823 705 aa10.93□□□□□ -0.66
SYNE2-219ENST00000555323 TMEM171Q8WVE6 324 aa10.93□□□□□ -0.66
SYNE2-219ENST00000555323 AKAP1Q92667 903 aaKnown RBP eCLIP10.93□□□□□ -0.66
SYNE2-219ENST00000555323 APOBEC3DQ96AK3 386 aaPredicted RBP10.93□□□□□ -0.66
SYNE2-219ENST00000555323 ZNF799Q96GE5 643 aa10.93□□□□□ -0.66
SYNE2-219ENST00000555323 TMEM80Q96HE8 168 aa10.93□□□□□ -0.66
SYNE2-219ENST00000555323 COG8Q96MW5 612 aa10.93□□□□□ -0.66
SYNE2-219ENST00000555323 MYCBPQ99417 103 aaPredicted RBP10.93□□□□□ -0.66
SYNE2-219ENST00000555323 DHRS9Q9BPW9 319 aa10.93□□□□□ -0.66
SYNE2-219ENST00000555323 COPS4Q9BT78 406 aa10.93□□□□□ -0.66
SYNE2-219ENST00000555323 DUSP21Q9H596 190 aa10.93□□□□□ -0.66
SYNE2-219ENST00000555323 SCN3BQ9NY72 215 aa10.93□□□□□ -0.66
SYNE2-219ENST00000555323 MRM2Q9UI43 246 aaKnown RBP10.93□□□□□ -0.66
SYNE2-219ENST00000555323 DIMT1Q9UNQ2 313 aaKnown RBP10.93□□□□□ -0.66
SYNE2-219ENST00000555323 GRIP1Q9Y3R0 1128 aa10.93□□□□□ -0.66
SYNE2-219ENST00000555323 PCDHGB5Q9Y5G0 923 aa10.93□□□□□ -0.66
SYNE2-219ENST00000555323 ATP23Q9Y6H3 246 aa10.93□□□□□ -0.66
SYNE2-219ENST00000555323 DAPL1A0PJW8 107 aa10.92□□□□□ -0.66
SYNE2-219ENST00000555323 ACOD1A6NK06 481 aa10.92□□□□□ -0.66
SYNE2-219ENST00000555323 VSTM5A8MXK1 200 aa10.92□□□□□ -0.66
SYNE2-219ENST00000555323 HS3ST1O14792 307 aa10.92□□□□□ -0.66
SYNE2-219ENST00000555323 ABHD16AO95870 558 aa10.92□□□□□ -0.66
SYNE2-219ENST00000555323 ADRA2AP08913 450 aa10.92□□□□□ -0.66
SYNE2-219ENST00000555323 DANCRP0C864 163 aa10.92□□□□□ -0.66
SYNE2-219ENST00000555323 CRHBPP24387 322 aa10.92□□□□□ -0.66
SYNE2-219ENST00000555323 THBS4P35443 961 aa10.92□□□□□ -0.66
SYNE2-219ENST00000555323 MMP16P51512 607 aa10.92□□□□□ -0.66
SYNE2-219ENST00000555323 PRKXP51817 358 aa10.92□□□□□ -0.66
SYNE2-219ENST00000555323 RIDAP52758 137 aaKnown RBP10.92□□□□□ -0.66
SYNE2-219ENST00000555323 SLC35A2P78381 396 aa10.92□□□□□ -0.66
SYNE2-219ENST00000555323 ST3GAL4Q11206 333 aa10.92□□□□□ -0.66
SYNE2-219ENST00000555323 SNTB2Q13425 540 aaKnown RBP10.92□□□□□ -0.66
SYNE2-219ENST00000555323 MED21Q13503 144 aa10.92□□□□□ -0.66
SYNE2-219ENST00000555323 RBM48Q5RL73 367 aaKnown RBP10.92□□□□□ -0.66
SYNE2-219ENST00000555323 RNLSQ5VYX0 342 aa10.92□□□□□ -0.66
SYNE2-219ENST00000555323 PLEKHG7Q6ZR37 379 aa10.92□□□□□ -0.66
SYNE2-219ENST00000555323 SPATC1Q76KD6 591 aa10.92□□□□□ -0.66
SYNE2-219ENST00000555323 SYS1Q8N2H4 156 aa10.92□□□□□ -0.66
SYNE2-219ENST00000555323 NEUROG1Q92886 237 aa10.92□□□□□ -0.66
SYNE2-219ENST00000555323 MARS2Q96GW9 593 aaKnown RBP10.92□□□□□ -0.66
SYNE2-219ENST00000555323 TBX5Q99593 518 aa10.92□□□□□ -0.66
SYNE2-219ENST00000555323 DOK1Q99704 481 aa10.92□□□□□ -0.66
SYNE2-219ENST00000555323 RHNO1Q9BSD3 238 aa10.92□□□□□ -0.66
SYNE2-219ENST00000555323 YTHDF1Q9BYJ9 559 aaKnown RBP10.92□□□□□ -0.66
SYNE2-219ENST00000555323 SP140LQ9H930 580 aa10.92□□□□□ -0.66
SYNE2-219ENST00000555323 ERVK13-1Q9NX77 482 aa10.92□□□□□ -0.66
SYNE2-219ENST00000555323 POU2F3Q9UKI9 436 aa10.92□□□□□ -0.66
SYNE2-219ENST00000555323 TPRKBQ9Y3C4 175 aa10.92□□□□□ -0.66
SYNE2-219ENST00000555323 LRP12Q9Y561 859 aa10.92□□□□□ -0.66
SYNE2-219ENST00000555323 PTPN13Q12923 2485 aa10.91□□□□□ -0.66
SYNE2-219ENST00000555323 METTL15A6NJ78 407 aa10.91□□□□□ -0.66
SYNE2-219ENST00000555323 H3BSA7 217 aa10.91□□□□□ -0.66
SYNE2-219ENST00000555323 PSMD9O00233 223 aa10.91□□□□□ -0.66
SYNE2-219ENST00000555323 MAGEB4O15481 346 aaPredicted RBP10.91□□□□□ -0.66
SYNE2-219ENST00000555323 FAM20BO75063 409 aa10.91□□□□□ -0.66
SYNE2-219ENST00000555323 SRSF10O75494 262 aaKnown RBP10.91□□□□□ -0.66
SYNE2-219ENST00000555323 KRT8P05787 483 aa10.91□□□□□ -0.66
SYNE2-219ENST00000555323 FAM157BP0CG42 384 aa10.91□□□□□ -0.66
SYNE2-219ENST00000555323 LIMS3P0CW19 117 aa10.91□□□□□ -0.66
SYNE2-219ENST00000555323 LIMS4P0CW20 117 aa10.91□□□□□ -0.66
SYNE2-219ENST00000555323 ZNF250P15622 560 aa10.91□□□□□ -0.66
SYNE2-219ENST00000555323 HSD11B1P28845 292 aa10.91□□□□□ -0.66
SYNE2-219ENST00000555323 TTKP33981 857 aa10.91□□□□□ -0.66
SYNE2-219ENST00000555323 EVX1P49640 407 aa10.91□□□□□ -0.66
SYNE2-219ENST00000555323 PSMA6P60900 246 aaKnown RBP10.91□□□□□ -0.66
SYNE2-219ENST00000555323 PPP1CBP62140 327 aa10.91□□□□□ -0.66
SYNE2-219ENST00000555323 RPS23P62266 143 aaKnown RBP10.91□□□□□ -0.66
SYNE2-219ENST00000555323 MVKQ03426 396 aa10.91□□□□□ -0.66
SYNE2-219ENST00000555323 ADIPOQQ15848 244 aa10.91□□□□□ -0.66
SYNE2-219ENST00000555323 MSMPQ1L6U9 139 aa10.91□□□□□ -0.66
SYNE2-219ENST00000555323 LIPNQ5VXI9 398 aa10.91□□□□□ -0.66
SYNE2-219ENST00000555323 MBNL2Q5VZF2 373 aaKnown RBP10.91□□□□□ -0.66
SYNE2-219ENST00000555323 LHFPL3Q86UP9 236 aa10.91□□□□□ -0.66
SYNE2-219ENST00000555323 ZNF540Q8NDQ6 660 aa10.91□□□□□ -0.66
SYNE2-219ENST00000555323 OR52H1Q8NGJ2 320 aa10.91□□□□□ -0.66
SYNE2-219ENST00000555323 OR5L1Q8NGL2 311 aa10.91□□□□□ -0.66
SYNE2-219ENST00000555323 OR1J1Q8NGS3 322 aa10.91□□□□□ -0.66
SYNE2-219ENST00000555323 ABHD4Q8TB40 342 aa10.91□□□□□ -0.66
SYNE2-219ENST00000555323 SNX33Q8WV41 574 aa10.91□□□□□ -0.66
SYNE2-219ENST00000555323 IGFBPL1Q8WX77 278 aa10.91□□□□□ -0.66
SYNE2-219ENST00000555323 FBXW5Q969U6 566 aa10.91□□□□□ -0.66
SYNE2-219ENST00000555323 MRPL48Q96GC5 212 aaKnown RBP10.91□□□□□ -0.66
SYNE2-219ENST00000555323 SIGLEC11Q96RL6 698 aa10.91□□□□□ -0.66
SYNE2-219ENST00000555323 IKZF2Q9UKS7 526 aa10.91□□□□□ -0.66
SYNE2-219ENST00000555323 STARD10Q9Y365 291 aa10.91□□□□□ -0.66
SYNE2-219ENST00000555323 EXOSC1Q9Y3B2 195 aaKnown RBP10.91□□□□□ -0.66
SYNE2-219ENST00000555323 IGLV3-9A0A075B6K5 115 aa10.9□□□□□ -0.66
SYNE2-219ENST00000555323 TMEM269A0A1B0GVZ9 245 aa10.9□□□□□ -0.66
SYNE2-219ENST00000555323 TMEM129A0AVI4 362 aa10.9□□□□□ -0.66
SYNE2-219ENST00000555323 GPRIN2O60269 458 aa10.9□□□□□ -0.66
SYNE2-219ENST00000555323 LCATP04180 440 aa10.9□□□□□ -0.66
SYNE2-219ENST00000555323 CDK1P06493 297 aa10.9□□□□□ -0.66
SYNE2-219ENST00000555323 TACSTD2P09758 323 aa10.9□□□□□ -0.66
SYNE2-219ENST00000555323 C21orf33P30042 268 aaPredicted RBP10.9□□□□□ -0.66
SYNE2-219ENST00000555323 SERPINF1P36955 418 aa10.9□□□□□ -0.66
SYNE2-219ENST00000555323 CX3CR1P49238 355 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms