RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 SLC15A1P46059 708 aa10.34□□□□□ -0.75
SRP54-206ENST00000555317 RIPPLY3P57055 190 aa10.34□□□□□ -0.75
SRP54-206ENST00000555317 CCL8P80075 99 aa10.34□□□□□ -0.75
SRP54-206ENST00000555317 PPP2R2BQ00005 443 aa10.34□□□□□ -0.75
SRP54-206ENST00000555317 CDK5Q00535 292 aa10.34□□□□□ -0.75
SRP54-206ENST00000555317 EIF2B1Q14232 305 aaKnown RBP10.34□□□□□ -0.75
SRP54-206ENST00000555317 TSTQ16762 297 aaKnown RBP10.34□□□□□ -0.75
SRP54-206ENST00000555317 TMEM236Q5W0B7 351 aa10.34□□□□□ -0.75
SRP54-206ENST00000555317 LYPD4Q6UWN0 246 aa10.34□□□□□ -0.75
SRP54-206ENST00000555317 CXXC5Q7LFL8 322 aaKnown RBP10.34□□□□□ -0.75
SRP54-206ENST00000555317 CPOQ8IVL8 374 aa10.34□□□□□ -0.75
SRP54-206ENST00000555317 PTP4A1Q93096 173 aa10.34□□□□□ -0.75
SRP54-206ENST00000555317 ZNF799Q96GE5 643 aa10.34□□□□□ -0.75
SRP54-206ENST00000555317 DIRC2Q96SL1 478 aa10.34□□□□□ -0.75
SRP54-206ENST00000555317 HCAR1Q9BXC0 346 aa10.34□□□□□ -0.75
SRP54-206ENST00000555317 CHODLQ9H9P2 273 aa10.34□□□□□ -0.75
SRP54-206ENST00000555317 SAP30LQ9HAJ7 183 aa10.34□□□□□ -0.75
SRP54-206ENST00000555317 CENPMQ9NSP4 180 aa10.34□□□□□ -0.75
SRP54-206ENST00000555317 ZDHHC8Q9ULC8 765 aa10.34□□□□□ -0.75
SRP54-206ENST00000555317 OAZ3Q9UMX2 235 aa10.34□□□□□ -0.75
SRP54-206ENST00000555317 STARD10Q9Y365 291 aa10.34□□□□□ -0.75
SRP54-206ENST00000555317 SAC3D1A6NKF1 404 aa10.33□□□□□ -0.76
SRP54-206ENST00000555317 ZNF878C9JN71 531 aa10.33□□□□□ -0.76
SRP54-206ENST00000555317 HPXP02790 462 aa10.33□□□□□ -0.76
SRP54-206ENST00000555317 ACSM4P0C7M7 580 aa10.33□□□□□ -0.76
SRP54-206ENST00000555317 RAC2P15153 192 aa10.33□□□□□ -0.76
SRP54-206ENST00000555317 SELEP16581 610 aa10.33□□□□□ -0.76
SRP54-206ENST00000555317 ACHEP22303 614 aa10.33□□□□□ -0.76
SRP54-206ENST00000555317 HSD11B1P28845 292 aa10.33□□□□□ -0.76
SRP54-206ENST00000555317 MAGEB1P43366 347 aa10.33□□□□□ -0.76
SRP54-206ENST00000555317 MRPS11P82912 194 aaKnown RBP10.33□□□□□ -0.76
SRP54-206ENST00000555317 LOXL1Q08397 574 aaPredicted RBP10.33□□□□□ -0.76
SRP54-206ENST00000555317 PSG7Q13046 419 aa10.33□□□□□ -0.76
SRP54-206ENST00000555317 TEX30Q5JUR7 227 aa10.33□□□□□ -0.76
SRP54-206ENST00000555317 FAM209AQ5JX71 171 aa10.33□□□□□ -0.76
SRP54-206ENST00000555317 SLC35D3Q5M8T2 416 aa10.33□□□□□ -0.76
SRP54-206ENST00000555317 LCN1P1Q5VSP4 162 aa10.33□□□□□ -0.76
SRP54-206ENST00000555317 SPATC1Q76KD6 591 aa10.33□□□□□ -0.76
SRP54-206ENST00000555317 SHFQ7M4L6 423 aa10.33□□□□□ -0.76
SRP54-206ENST00000555317 ZNRF4Q8WWF5 429 aa10.33□□□□□ -0.76
SRP54-206ENST00000555317 CMBLQ96DG6 245 aa10.33□□□□□ -0.76
SRP54-206ENST00000555317 SLAMF6Q96DU3 332 aa10.33□□□□□ -0.76
SRP54-206ENST00000555317 ZMYND19Q96E35 227 aaPredicted RBP10.33□□□□□ -0.76
SRP54-206ENST00000555317 MAP6Q96JE9 813 aa10.33□□□□□ -0.76
SRP54-206ENST00000555317 RBM4BQ9BQ04 359 aaKnown RBP10.33□□□□□ -0.76
SRP54-206ENST00000555317 OSBPL10Q9BXB5 764 aa10.33□□□□□ -0.76
SRP54-206ENST00000555317 BPESC1Q9GZL8 116 aa10.33□□□□□ -0.76
SRP54-206ENST00000555317 POFUT1Q9H488 388 aa10.33□□□□□ -0.76
SRP54-206ENST00000555317 DDX28Q9NUL7 540 aaKnown RBP10.33□□□□□ -0.76
SRP54-206ENST00000555317 NKIRAS2Q9NYR9 191 aa10.33□□□□□ -0.76
SRP54-206ENST00000555317 PURGQ9UJV8 347 aaKnown RBP10.33□□□□□ -0.76
SRP54-206ENST00000555317 JMJD1CQ15652 2540 aa10.33□□□□□ -0.76
SRP54-206ENST00000555317 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.33□□□□□ -0.763e-11■■■■□ 19.8
SRP54-206ENST00000555317 LYNX1G3V0Z9 82 aa10.32□□□□□ -0.76
SRP54-206ENST00000555317 PPIHO43447 177 aaKnown RBP10.32□□□□□ -0.76
SRP54-206ENST00000555317 CDC14BO60729 498 aa10.32□□□□□ -0.76
SRP54-206ENST00000555317 MITFO75030 526 aaPredicted RBP10.32□□□□□ -0.76
SRP54-206ENST00000555317 NCR1O76036 304 aa10.32□□□□□ -0.76
SRP54-206ENST00000555317 APOC1P02654 83 aa10.32□□□□□ -0.76
SRP54-206ENST00000555317 LYNX1P0DP58 116 aa10.32□□□□□ -0.76
SRP54-206ENST00000555317 KITLGP21583 273 aa10.32□□□□□ -0.76
SRP54-206ENST00000555317 GIFP27352 417 aa10.32□□□□□ -0.76
SRP54-206ENST00000555317 GPR6P46095 362 aaPredicted RBP10.32□□□□□ -0.76
SRP54-206ENST00000555317 MMP15P51511 669 aa10.32□□□□□ -0.76
SRP54-206ENST00000555317 CHN2P52757 468 aa10.32□□□□□ -0.76
SRP54-206ENST00000555317 GRB2P62993 217 aaKnown RBP10.32□□□□□ -0.76
SRP54-206ENST00000555317 HLXQ14774 488 aaPredicted RBP10.32□□□□□ -0.76
SRP54-206ENST00000555317 PTGES3Q15185 160 aaKnown RBP10.32□□□□□ -0.76
SRP54-206ENST00000555317 TMEM249Q2WGJ8 235 aa10.32□□□□□ -0.76
SRP54-206ENST00000555317 HFEQ30201 348 aa10.32□□□□□ -0.76
SRP54-206ENST00000555317 KDM4DQ6B0I6 523 aa10.32□□□□□ -0.76
SRP54-206ENST00000555317 DRAM2Q6UX65 266 aa10.32□□□□□ -0.76
SRP54-206ENST00000555317 FBXW12Q6X9E4 464 aa10.32□□□□□ -0.76
SRP54-206ENST00000555317 MRPL21Q7Z2W9 205 aaKnown RBP10.32□□□□□ -0.76
SRP54-206ENST00000555317 DPY19L4Q7Z388 723 aa10.32□□□□□ -0.76
SRP54-206ENST00000555317 ZNF283Q8N7M2 679 aa10.32□□□□□ -0.76
SRP54-206ENST00000555317 GTF3AQ92664 365 aaKnown RBP10.32□□□□□ -0.76
SRP54-206ENST00000555317 STMN2Q93045 179 aa10.32□□□□□ -0.76
SRP54-206ENST00000555317 HAVCR1Q96D42 359 aa10.32□□□□□ -0.76
SRP54-206ENST00000555317 ELMOD3Q96FG2 381 aa10.32□□□□□ -0.76
SRP54-206ENST00000555317 ZNF582Q96NG8 517 aaPredicted RBP10.32□□□□□ -0.76
SRP54-206ENST00000555317 C1QTNF5Q9BXJ0 243 aa10.32□□□□□ -0.76
SRP54-206ENST00000555317 RIBC2Q9H4K1 309 aa10.32□□□□□ -0.76
SRP54-206ENST00000555317 SP140LQ9H930 580 aa10.32□□□□□ -0.76
SRP54-206ENST00000555317 MSL2Q9HCI7 577 aa10.32□□□□□ -0.76
SRP54-206ENST00000555317 PNRC2Q9NPJ4 139 aaKnown RBP10.32□□□□□ -0.76
SRP54-206ENST00000555317 H2AFY2Q9P0M6 372 aaPredicted RBP10.32□□□□□ -0.76
SRP54-206ENST00000555317 N6AMT1Q9Y5N5 214 aa10.32□□□□□ -0.76
SRP54-206ENST00000555317 IGHV1-69-2A0A0G2JMI3 117 aa10.31□□□□□ -0.76
SRP54-206ENST00000555317 ZSCAN5BA6NJL1 495 aa10.31□□□□□ -0.76
SRP54-206ENST00000555317 VWC2LB2RUY7 222 aa10.31□□□□□ -0.76
SRP54-206ENST00000555317 CD5LO43866 347 aa10.31□□□□□ -0.76
SRP54-206ENST00000555317 IGHV1-46P01743 117 aa10.31□□□□□ -0.76
SRP54-206ENST00000555317 NAA10P41227 235 aaPredicted RBP10.31□□□□□ -0.76
SRP54-206ENST00000555317 GZMKP49863 264 aa10.31□□□□□ -0.76
SRP54-206ENST00000555317 TMEM33P57088 247 aa10.31□□□□□ -0.76
SRP54-206ENST00000555317 TNFAIP6P98066 277 aaPredicted RBP10.31□□□□□ -0.76
SRP54-206ENST00000555317 APOFQ13790 326 aa10.31□□□□□ -0.76
SRP54-206ENST00000555317 PCK2Q16822 640 aa10.31□□□□□ -0.76
SRP54-206ENST00000555317 LINC01590Q5TEZ4 76 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms