RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 ABHD16AO95870 558 aa14.21□□□□□ -0.13
SPTLC2-203ENST00000554901 CDK1P06493 297 aa14.21□□□□□ -0.13
SPTLC2-203ENST00000554901 TACSTD2P09758 323 aa14.21□□□□□ -0.13
SPTLC2-203ENST00000554901 ACSM4P0C7M7 580 aa14.21□□□□□ -0.13
SPTLC2-203ENST00000554901 CCL2P13500 99 aa14.21□□□□□ -0.13
SPTLC2-203ENST00000554901 CCNOP22674 350 aa14.21□□□□□ -0.13
SPTLC2-203ENST00000554901 NR4A1P22736 598 aa14.21□□□□□ -0.13
SPTLC2-203ENST00000554901 GABARAPL2P60520 117 aa14.21□□□□□ -0.13
SPTLC2-203ENST00000554901 RPS23P62266 143 aaKnown RBP14.21□□□□□ -0.13
SPTLC2-203ENST00000554901 COLCA1Q6ZS62 124 aa14.21□□□□□ -0.13
SPTLC2-203ENST00000554901 SSX6Q7RTT6 188 aa14.21□□□□□ -0.13
SPTLC2-203ENST00000554901 RFLNBQ8N5W9 214 aa14.21□□□□□ -0.13
SPTLC2-203ENST00000554901 ZNF649Q9BS31 505 aa14.21□□□□□ -0.13
SPTLC2-203ENST00000554901 RHNO1Q9BSD3 238 aa14.21□□□□□ -0.13
SPTLC2-203ENST00000554901 C1QTNF5Q9BXJ0 243 aa14.21□□□□□ -0.13
SPTLC2-203ENST00000554901 PRR32B1ATL7 298 aa14.2□□□□□ -0.14
SPTLC2-203ENST00000554901 SHISA9B4DS77 424 aa14.2□□□□□ -0.14
SPTLC2-203ENST00000554901 PTGES3LE9PB15 166 aa14.2□□□□□ -0.14
SPTLC2-203ENST00000554901 CTAG2O75638 210 aa14.2□□□□□ -0.14
SPTLC2-203ENST00000554901 DBHP09172 617 aa14.2□□□□□ -0.14
SPTLC2-203ENST00000554901 LIMS3P0CW19 117 aa14.2□□□□□ -0.14
SPTLC2-203ENST00000554901 LIMS4P0CW20 117 aa14.2□□□□□ -0.14
SPTLC2-203ENST00000554901 MMP16P51512 607 aa14.2□□□□□ -0.14
SPTLC2-203ENST00000554901 UCP2P55851 309 aa14.2□□□□□ -0.14
SPTLC2-203ENST00000554901 PSMA6P60900 246 aaKnown RBP14.2□□□□□ -0.14
SPTLC2-203ENST00000554901 NKX6-1P78426 367 aaPredicted RBP14.2□□□□□ -0.14
SPTLC2-203ENST00000554901 MRPL28Q13084 256 aaKnown RBP14.2□□□□□ -0.14
SPTLC2-203ENST00000554901 ZNF829Q3KNS6 432 aaPredicted RBP14.2□□□□□ -0.14
SPTLC2-203ENST00000554901 SPATC1Q76KD6 591 aa14.2□□□□□ -0.14
SPTLC2-203ENST00000554901 FAM220AQ7Z4H9 259 aa14.2□□□□□ -0.14
SPTLC2-203ENST00000554901 PAQR4Q8N4S7 273 aaPredicted RBP14.2□□□□□ -0.14
SPTLC2-203ENST00000554901 ZNF283Q8N7M2 679 aa14.2□□□□□ -0.14
SPTLC2-203ENST00000554901 SLC7A6Q92536 515 aa14.2□□□□□ -0.14
SPTLC2-203ENST00000554901 APOBEC3DQ96AK3 386 aaPredicted RBP14.2□□□□□ -0.14
SPTLC2-203ENST00000554901 HS3ST6Q96QI5 342 aa14.2□□□□□ -0.14
SPTLC2-203ENST00000554901 DOK1Q99704 481 aa14.2□□□□□ -0.14
SPTLC2-203ENST00000554901 ALG8Q9BVK2 526 aa14.2□□□□□ -0.14
SPTLC2-203ENST00000554901 MRM2Q9UI43 246 aaKnown RBP14.2□□□□□ -0.14
SPTLC2-203ENST00000554901 CAB39Q9Y376 341 aaPredicted RBP14.2□□□□□ -0.14
SPTLC2-203ENST00000554901 GRIP1Q9Y3R0 1128 aa14.2□□□□□ -0.14
SPTLC2-203ENST00000554901 ABCA4P78363 2273 aa14.2□□□□□ -0.14
SPTLC2-203ENST00000554901 ATP6V1G2-DDX39BF2Z307 99 aa14.2□□□□□ -0.14
SPTLC2-203ENST00000554901 H3BSA7 217 aa14.2□□□□□ -0.14
SPTLC2-203ENST00000554901 SSTR2P30874 369 aa14.2□□□□□ -0.14
SPTLC2-203ENST00000554901 GLRXP35754 106 aa14.2□□□□□ -0.14
SPTLC2-203ENST00000554901 WNT5AP41221 380 aa14.2□□□□□ -0.14
SPTLC2-203ENST00000554901 CX3CR1P49238 355 aa14.2□□□□□ -0.14
SPTLC2-203ENST00000554901 HGFACQ04756 655 aa14.2□□□□□ -0.14
SPTLC2-203ENST00000554901 SPOCK1Q08629 439 aa14.2□□□□□ -0.14
SPTLC2-203ENST00000554901 TMPRSS11AQ6ZMR5 421 aa14.2□□□□□ -0.14
SPTLC2-203ENST00000554901 ZNF704Q6ZNC4 412 aaPredicted RBP14.2□□□□□ -0.14
SPTLC2-203ENST00000554901 LHFPL3Q86UP9 236 aa14.2□□□□□ -0.14
SPTLC2-203ENST00000554901 OR5L1Q8NGL2 311 aa14.2□□□□□ -0.14
SPTLC2-203ENST00000554901 OR52N1Q8NH53 320 aa14.2□□□□□ -0.14
SPTLC2-203ENST00000554901 SIGLEC11Q96RL6 698 aa14.2□□□□□ -0.14
SPTLC2-203ENST00000554901 CDCA4Q9BXL8 241 aa14.2□□□□□ -0.14
SPTLC2-203ENST00000554901 ZNF442Q9H7R0 627 aa14.2□□□□□ -0.14
SPTLC2-203ENST00000554901 POU2F3Q9UKI9 436 aa14.2□□□□□ -0.14
SPTLC2-203ENST00000554901 RTTNQ86VV8 2226 aa14.2□□□□□ -0.14
SPTLC2-203ENST00000554901 TMEM129A0AVI4 362 aa14.19□□□□□ -0.14
SPTLC2-203ENST00000554901 VSTM5A8MXK1 200 aa14.19□□□□□ -0.14
SPTLC2-203ENST00000554901 RGS10O43665 173 aa14.19□□□□□ -0.14
SPTLC2-203ENST00000554901 SMPD2O60906 423 aa14.19□□□□□ -0.14
SPTLC2-203ENST00000554901 COL8A1P27658 744 aa14.19□□□□□ -0.14
SPTLC2-203ENST00000554901 SLC6A9P48067 706 aa14.19□□□□□ -0.14
SPTLC2-203ENST00000554901 PRKXP51817 358 aa14.19□□□□□ -0.14
SPTLC2-203ENST00000554901 TLE4Q04727 773 aa14.19□□□□□ -0.14
SPTLC2-203ENST00000554901 LIPNQ5VXI9 398 aa14.19□□□□□ -0.14
SPTLC2-203ENST00000554901 PRSS48Q7RTY5 328 aa14.19□□□□□ -0.14
SPTLC2-203ENST00000554901 YIPF7Q8N8F6 280 aa14.19□□□□□ -0.14
SPTLC2-203ENST00000554901 OR52H1Q8NGJ2 320 aa14.19□□□□□ -0.14
SPTLC2-203ENST00000554901 MOB1AQ9H8S9 216 aa14.19□□□□□ -0.14
SPTLC2-203ENST00000554901 PAK1IP1Q9NWT1 392 aaPredicted RBP14.19□□□□□ -0.14
SPTLC2-203ENST00000554901 HEATR1Q9H583 2144 aaKnown RBP14.19□□□□□ -0.14
SPTLC2-203ENST00000554901 TMEM269A0A1B0GVZ9 245 aa14.18□□□□□ -0.14
SPTLC2-203ENST00000554901 PSMD9O00233 223 aa14.18□□□□□ -0.14
SPTLC2-203ENST00000554901 EEF1B2P24534 225 aaKnown RBP14.18□□□□□ -0.14
SPTLC2-203ENST00000554901 C21orf33P30042 268 aaPredicted RBP14.18□□□□□ -0.14
SPTLC2-203ENST00000554901 ETV1P50549 477 aa14.18□□□□□ -0.14
SPTLC2-203ENST00000554901 SNTB2Q13425 540 aaKnown RBP14.18□□□□□ -0.14
SPTLC2-203ENST00000554901 ZNF672Q499Z4 452 aaPredicted RBP14.18□□□□□ -0.14
SPTLC2-203ENST00000554901 KCTD21Q4G0X4 260 aa14.18□□□□□ -0.14
SPTLC2-203ENST00000554901 ZNF544Q6NX49 715 aa14.18□□□□□ -0.14
SPTLC2-203ENST00000554901 PRSS45Q7RTY3 260 aa14.18□□□□□ -0.14
SPTLC2-203ENST00000554901 ZNF101Q8IZC7 436 aa14.18□□□□□ -0.14
SPTLC2-203ENST00000554901 ZNF295-AS1Q8N0V1 137 aa14.18□□□□□ -0.14
SPTLC2-203ENST00000554901 KLHL36Q8N4N3 616 aa14.18□□□□□ -0.14
SPTLC2-203ENST00000554901 KBTBD8Q8NFY9 601 aa14.18□□□□□ -0.14
SPTLC2-203ENST00000554901 ITFG2Q969R8 447 aa14.18□□□□□ -0.14
SPTLC2-203ENST00000554901 TTTY10Q9BZA0 68 aa14.18□□□□□ -0.14
SPTLC2-203ENST00000554901 CA10Q9NS85 328 aa14.18□□□□□ -0.14
SPTLC2-203ENST00000554901 ZNF391Q9UJN7 358 aa14.18□□□□□ -0.14
SPTLC2-203ENST00000554901 GNG8Q9UK08 70 aa14.18□□□□□ -0.14
SPTLC2-203ENST00000554901 ERGIC3Q9Y282 383 aa14.18□□□□□ -0.14
SPTLC2-203ENST00000554901 ATP23Q9Y6H3 246 aa14.18□□□□□ -0.14
SPTLC2-203ENST00000554901 R4GMQ9 66 aa14.18□□□□□ -0.14
SPTLC2-203ENST00000554901 MT-ND5P03915 603 aa14.17□□□□□ -0.14
SPTLC2-203ENST00000554901 LCATP04180 440 aa14.17□□□□□ -0.14
SPTLC2-203ENST00000554901 OR12D2P58182 307 aa14.17□□□□□ -0.14
SPTLC2-203ENST00000554901 ZNF121P58317 390 aaPredicted RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms