RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 MOSPD2Q8NHP6 518 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 SLC26A7Q8TE54 656 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 TMEM239Q8WW34 195 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 GEMIN6Q8WXD5 167 aaKnown RBP3.56□□□□□ -1.84
VTI1B-203ENST00000554636 HTRA1Q92743 480 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 SGTBQ96EQ0 304 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 ADAD1Q96M93 576 aaKnown RBP3.56□□□□□ -1.84
VTI1B-203ENST00000554636 ULBP2Q9BZM5 246 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 PLK3Q9H4B4 646 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 B3GAT2Q9NPZ5 323 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 NANSQ9NR45 359 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 CA10Q9NS85 328 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 TMEM38BQ9NVV0 291 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 GLTPQ9NZD2 209 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 ABCD2Q9UBJ2 740 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 RIMS3Q9UJD0 308 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 POFUT2Q9Y2G5 429 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 AP3M1Q9Y2T2 418 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 SH3GLB1Q9Y371 365 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 SVEP1Q4LDE5 3571 aa3.56□□□□□ -1.84
VTI1B-203ENST00000554636 TMEM129A0AVI4 362 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 ZNF726A6NNF4 738 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 CENPBD1B2RD01 187 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 B9A039 149 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 hCG_2039718K7EN88 272 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 CXCR6O00574 342 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 RNF13O43567 381 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 CD5LO43866 347 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 GPRIN2O60269 458 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 SNX3O60493 162 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 LY6HO94772 140 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 UBL3O95164 117 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 OR6A2O95222 327 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 TNFRSF6BO95407 300 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 BCL10O95999 233 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 IFNA14P01570 189 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 IGHG1P01857 330 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 IGHMP01871 453 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 CRYAAP02489 173 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 MMP7P09237 267 aaPredicted RBP3.55□□□□□ -1.84
VTI1B-203ENST00000554636 CSF3P09919 207 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 OR4A8P0C604 315 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 PATE4P0C8F1 98 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 UMPSP11172 480 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 ZNF35P13682 527 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 ACADSP16219 412 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 NCK1P16333 377 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 ZNF26P17031 533 aaPredicted RBP3.55□□□□□ -1.84
VTI1B-203ENST00000554636 FUT1P19526 365 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 PRDX6P30041 224 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 ARR3P36575 388 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 SERPINF1P36955 418 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 AQP2P41181 271 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 YAP1P46937 504 aaKnown RBP3.55□□□□□ -1.84
VTI1B-203ENST00000554636 CAPZA2P47755 286 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 PPOXP50336 477 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 NUDT2P50583 147 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 DAP3P51398 398 aaKnown RBP3.55□□□□□ -1.84
VTI1B-203ENST00000554636 EFNA4P52798 201 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 NUDT6P53370 316 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 DSCR9P59020 149 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 PSME3P61289 254 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 SNRPD2P62316 118 aaKnown RBP3.55□□□□□ -1.84
VTI1B-203ENST00000554636 SELENOWP63302 87 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 CHRNB3Q05901 458 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 LOXL1Q08397 574 aaPredicted RBP3.55□□□□□ -1.84
VTI1B-203ENST00000554636 SNTB2Q13425 540 aaKnown RBP3.55□□□□□ -1.84
VTI1B-203ENST00000554636 HIST3H3Q16695 136 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 GSG1Q2KHT4 349 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 TMEM249Q2WGJ8 235 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 IFI44LQ53G44 452 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 C10orf128Q5T292 105 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 CLEC2AQ6UVW9 174 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 MEX3DQ86XN8 651 aaKnown RBP3.55□□□□□ -1.84
VTI1B-203ENST00000554636 SKA3Q8IX90 412 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 NRMQ8IXM6 262 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 CCDC36Q8IYA8 594 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 CDK20Q8IZL9 346 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 OR13C2Q8NGS9 318 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 OR6N1Q8NGY5 312 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 C10orf105Q8TEF2 133 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 HDAC2Q92769 488 aaKnown RBP3.55□□□□□ -1.84
VTI1B-203ENST00000554636 MCHR2Q969V1 340 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 FAM162AQ96A26 154 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 MRPL24Q96A35 216 aaKnown RBP3.55□□□□□ -1.84
VTI1B-203ENST00000554636 FBXO17Q96EF6 278 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 SLC25A44Q96H78 314 aaPredicted RBP3.55□□□□□ -1.84
VTI1B-203ENST00000554636 TPD52L3Q96J77 140 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 ZNF479Q96JC4 524 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 DOK1Q99704 481 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 HOPXQ9BPY8 73 aaPredicted RBP3.55□□□□□ -1.84
VTI1B-203ENST00000554636 KCTD14Q9BQ13 255 aaPredicted RBP3.55□□□□□ -1.84
VTI1B-203ENST00000554636 KCNS3Q9BQ31 491 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 ELAC2Q9BQ52 826 aaKnown RBP3.55□□□□□ -1.84
VTI1B-203ENST00000554636 MRPL13Q9BYD1 178 aaKnown RBP3.55□□□□□ -1.84
VTI1B-203ENST00000554636 SEPSECSQ9HD40 501 aaKnown RBP3.55□□□□□ -1.84
VTI1B-203ENST00000554636 INIPQ9NRY2 104 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 MED31Q9Y3C7 131 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 UGT2A1Q9Y4X1 527 aa3.55□□□□□ -1.84
VTI1B-203ENST00000554636 TRAV27A0A087WT01 109 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms