RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 C4orf32Q8N8J7 132 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 NECAP1Q8NC96 275 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 OR10R2Q8NGX6 335 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 OR2L8Q8NGY9 312 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 OR8U1Q8NH10 309 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 FLVCR1-AS1Q8TAF5 88 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 MRAPQ8TCY5 172 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 SFXN5Q8TD22 340 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 PHF10Q8WUB8 498 aaKnown RBP1.72□□□□□ -2.13
SRP54-204ENST00000553923 ANKRD7Q92527 254 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 CHMP6Q96FZ7 201 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 ADTRPQ96IZ2 230 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 HIST1H4GQ99525 98 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 ATF6BQ99941 703 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 ANGPTL4Q9BY76 406 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 SRXN1Q9BYN0 137 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 POLR2J2Q9GZM3 115 aaKnown RBP1.72□□□□□ -2.13
SRP54-204ENST00000553923 POLR2J3Q9H1A7 115 aaKnown RBP1.72□□□□□ -2.13
SRP54-204ENST00000553923 PTGES2Q9H7Z7 377 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 HEXA-AS1Q9H8Q6 139 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 TMEM9BQ9NQ34 198 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 RMND1Q9NWS8 449 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 SLC25A37Q9NYZ2 338 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 VAPAQ9P0L0 249 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 DHRS4-AS1Q9P1J3 65 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 CTSZQ9UBR2 303 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 TRMT112Q9UI30 125 aaKnown RBP1.72□□□□□ -2.13
SRP54-204ENST00000553923 RAB23Q9ULC3 237 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 ST3GAL6Q9Y274 331 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 ZNF256Q9Y2P7 627 aaPredicted RBP1.72□□□□□ -2.13
SRP54-204ENST00000553923 PPIL1Q9Y3C6 166 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 FADS3Q9Y5Q0 445 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 KIF25-AS1Q9Y6Z4 181 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 JCADQ9P266 1359 aa1.72□□□□□ -2.13
SRP54-204ENST00000553923 FANCIQ9NVI1 1328 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 IGHV3OR16-13A0A075B7E8 117 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 IGHV3-16A0A0C4DH30 117 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 GOLGA8JA6NMD2 632 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 SHISA9B4DS77 424 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 C12orf77C9JDV5 145 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 ANKRD63C9JTQ0 380 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 GOLGA8KD6RF30 607 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 H0YHG0 523 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 GOLGA8MH3BSY2 632 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 K7ENP7 123 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 TOX3O15405 576 aaPredicted RBP1.71□□□□□ -2.14
SRP54-204ENST00000553923 SGCEO43556 437 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 CDC40O60508 579 aaKnown RBP eCLIP1.71□□□□□ -2.14
SRP54-204ENST00000553923 ALOX12BO75342 701 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 GJB5O95377 273 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 UTS2O95399 124 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 BRI3O95415 125 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 DEXIO95424 95 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 GP1BAP07359 652 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 RETP07949 1114 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 HOXC4P09017 264 aaPredicted RBP1.71□□□□□ -2.14
SRP54-204ENST00000553923 GIPP09681 153 aaPredicted RBP1.71□□□□□ -2.14
SRP54-204ENST00000553923 GOLGA8HP0CJ92 632 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 CT45A6P0DMU7 189 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 CT45A5P0DMU8 189 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 CT45A7P0DMV0 189 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 HSPD1P10809 573 aaKnown RBP1.71□□□□□ -2.14
SRP54-204ENST00000553923 CD37P11049 281 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 PGAM2P15259 253 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 GABRG2P18507 467 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 RAB5AP20339 215 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 PVALBP20472 110 aaPredicted RBP1.71□□□□□ -2.14
SRP54-204ENST00000553923 CMA1P23946 247 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 HLA-DMAP28067 261 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 PRKAR2BP31323 418 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 BTCP35070 178 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 MAS1LP35410 378 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 SERPINB5P36952 375 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 KIR2DS2P43631 304 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 TUFMP49411 452 aaKnown RBP1.71□□□□□ -2.14
SRP54-204ENST00000553923 HCCSP53701 268 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 APOC4P55056 127 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 AP1S2P56377 157 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 DSTNP60981 165 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 PRKCDQ05655 676 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 CD47Q08722 323 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 ST3GAL4Q11206 333 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 STX5Q13190 355 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 SLAMF1Q13291 335 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 DYNC1I2Q13409 638 aaKnown RBP1.71□□□□□ -2.14
SRP54-204ENST00000553923 UNC119Q13432 240 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 RUNX3Q13761 415 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 ARFRP1Q13795 201 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 OR7A5Q15622 319 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 ZNF726P1Q15940 193 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 UAP1Q16222 522 aaPredicted RBP1.71□□□□□ -2.14
SRP54-204ENST00000553923 KYAT1Q16773 422 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 CT45A1Q5HYN5 189 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 ACTL10Q5JWF8 245 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 C1orf146Q5VVC0 180 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 OR2T5Q6IEZ7 315 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 APOBEC3HQ6NTF7 200 aaKnown RBP1.71□□□□□ -2.14
SRP54-204ENST00000553923 TMUB2Q71RG4 321 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 SSX7Q7RTT5 188 aa1.71□□□□□ -2.14
SRP54-204ENST00000553923 PPP1R27Q86WC6 154 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms