RNA–Protein interactions for RNA: ENST00000553871.5

EFCAB11-204, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-204ENST00000553871 SIRT7Q9NRC8 400 aa2.18□□□□□ -2.06
EFCAB11-204ENST00000553871 SLC39A1Q9NY26 324 aa2.18□□□□□ -2.06
EFCAB11-204ENST00000553871 MYEF2Q9P2K5 600 aaKnown RBP2.18□□□□□ -2.06
EFCAB11-204ENST00000553871 MTFP1Q9UDX5 166 aa2.18□□□□□ -2.06
EFCAB11-204ENST00000553871 CAB39Q9Y376 341 aaPredicted RBP2.18□□□□□ -2.06
EFCAB11-204ENST00000553871 KIF13AQ9H1H9 1805 aa2.18□□□□□ -2.06
EFCAB11-204ENST00000553871 IQSEC2Q5JU85 1478 aa2.18□□□□□ -2.06
EFCAB11-204ENST00000553871 IGSF9BQ9UPX0 1349 aa2.17□□□□□ -2.06
EFCAB11-204ENST00000553871 TSPAN11A1L157 253 aa2.17□□□□□ -2.06
EFCAB11-204ENST00000553871 NCBP2LA6PVI3 153 aaKnown RBP2.17□□□□□ -2.06
EFCAB11-204ENST00000553871 SUPT3HB4E1H0 165 aa2.17□□□□□ -2.06
EFCAB11-204ENST00000553871 GOLGA8TH3BQL2 631 aa2.17□□□□□ -2.06
EFCAB11-204ENST00000553871 SLC22A5O76082 557 aa2.17□□□□□ -2.06
EFCAB11-204ENST00000553871 AQP8O94778 261 aa2.17□□□□□ -2.06
EFCAB11-204ENST00000553871 HLA-HP01893 362 aa2.17□□□□□ -2.06
EFCAB11-204ENST00000553871 APCSP02743 223 aa2.17□□□□□ -2.06
EFCAB11-204ENST00000553871 CLTAP09496 248 aa2.17□□□□□ -2.06
EFCAB11-204ENST00000553871 C1GALT1C1LP0DN25 315 aa2.17□□□□□ -2.06
EFCAB11-204ENST00000553871 CD37P11049 281 aa2.17□□□□□ -2.06
EFCAB11-204ENST00000553871 TALDO1P37837 337 aa2.17□□□□□ -2.06
EFCAB11-204ENST00000553871 TNFSF9P41273 254 aa2.17□□□□□ -2.06
EFCAB11-204ENST00000553871 RBM34P42696 430 aaKnown RBP2.17□□□□□ -2.06
EFCAB11-204ENST00000553871 RPS23P62266 143 aaKnown RBP2.17□□□□□ -2.06
EFCAB11-204ENST00000553871 PRR3P79522 188 aaKnown RBP2.17□□□□□ -2.06
EFCAB11-204ENST00000553871 GBE1Q04446 702 aa2.17□□□□□ -2.06
EFCAB11-204ENST00000553871 DGCR6Q14129 220 aa2.17□□□□□ -2.06
EFCAB11-204ENST00000553871 KIR2DS1Q14954 304 aa2.17□□□□□ -2.06
EFCAB11-204ENST00000553871 KRTAP13-3Q3SY46 172 aa2.17□□□□□ -2.06
EFCAB11-204ENST00000553871 COX19Q49B96 90 aa2.17□□□□□ -2.06
EFCAB11-204ENST00000553871 ZNF684Q5T5D7 378 aa2.17□□□□□ -2.06
EFCAB11-204ENST00000553871 AVPI1Q5T686 147 aa2.17□□□□□ -2.06
EFCAB11-204ENST00000553871 C1orf185Q5T7R7 199 aa2.17□□□□□ -2.06
EFCAB11-204ENST00000553871 NPSR1Q6W5P4 371 aa2.17□□□□□ -2.06
EFCAB11-204ENST00000553871 WDR86Q86TI4 376 aa2.17□□□□□ -2.06
EFCAB11-204ENST00000553871 ZNF547Q8IVP9 402 aa2.17□□□□□ -2.06
EFCAB11-204ENST00000553871 NKAIN4Q8IVV8 208 aa2.17□□□□□ -2.06
EFCAB11-204ENST00000553871 WDFY1Q8IWB7 410 aa2.17□□□□□ -2.06
EFCAB11-204ENST00000553871 CSGALNACT2Q8N6G5 542 aa2.17□□□□□ -2.06
EFCAB11-204ENST00000553871 PQLC3Q8N755 202 aa2.17□□□□□ -2.06
EFCAB11-204ENST00000553871 ZNF461Q8TAF7 563 aa2.17□□□□□ -2.06
EFCAB11-204ENST00000553871 PTX4Q96A99 478 aa2.17□□□□□ -2.06
EFCAB11-204ENST00000553871 JSRP1Q96MG2 331 aaPredicted RBP2.17□□□□□ -2.06
EFCAB11-204ENST00000553871 SPIN2AQ99865 258 aa2.17□□□□□ -2.06
EFCAB11-204ENST00000553871 SPIN2BQ9BPZ2 258 aa2.17□□□□□ -2.06
EFCAB11-204ENST00000553871 MED4Q9NPJ6 270 aa2.17□□□□□ -2.06
EFCAB11-204ENST00000553871 CLN6Q9NWW5 311 aa2.17□□□□□ -2.06
EFCAB11-204ENST00000553871 TBC1D24Q9ULP9 559 aa2.17□□□□□ -2.06
EFCAB11-204ENST00000553871 CEP164Q9UPV0 1460 aa2.17□□□□□ -2.06
EFCAB11-204ENST00000553871 PCF11O94913 1555 aaKnown RBP2.17□□□□□ -2.06
EFCAB11-204ENST00000553871 PTPRTO14522 1441 aa2.17□□□□□ -2.06
EFCAB11-204ENST00000553871 GAKO14976 1311 aa2.17□□□□□ -2.06
EFCAB11-204ENST00000553871 INSRP06213 1382 aa2.16□□□□□ -2.06
EFCAB11-204ENST00000553871 KCNE1BA0A087WTH5 132 aa2.16□□□□□ -2.06
EFCAB11-204ENST00000553871 IGHV1OR15-9A0A0B4J2B8 117 aa2.16□□□□□ -2.06
EFCAB11-204ENST00000553871 A6NDN8 102 aa2.16□□□□□ -2.06
EFCAB11-204ENST00000553871 H7C1H1 209 aa2.16□□□□□ -2.06
EFCAB11-204ENST00000553871 GABRPO00591 440 aa2.16□□□□□ -2.06
EFCAB11-204ENST00000553871 CHST10O43529 356 aa2.16□□□□□ -2.06
EFCAB11-204ENST00000553871 YIF1AO95070 293 aa2.16□□□□□ -2.06
EFCAB11-204ENST00000553871 CD160O95971 181 aa2.16□□□□□ -2.06
EFCAB11-204ENST00000553871 HPRT1P00492 218 aa2.16□□□□□ -2.06
EFCAB11-204ENST00000553871 IFNW1P05000 195 aa2.16□□□□□ -2.06
EFCAB11-204ENST00000553871 KRT16P08779 473 aa2.16□□□□□ -2.06
EFCAB11-204ENST00000553871 ZNF688P0C7X2 276 aa2.16□□□□□ -2.06
EFCAB11-204ENST00000553871 ZNF806P0C7X5 589 aa2.16□□□□□ -2.06
EFCAB11-204ENST00000553871 UBCP0CG48 685 aaKnown RBP2.16□□□□□ -2.06
EFCAB11-204ENST00000553871 MUC1P15941 1255 aaPredicted RBP2.16□□□□□ -2.06
EFCAB11-204ENST00000553871 RAB4AP20338 218 aa2.16□□□□□ -2.06
EFCAB11-204ENST00000553871 RFC3P40938 356 aa2.16□□□□□ -2.06
EFCAB11-204ENST00000553871 PITPNAQ00169 270 aa2.16□□□□□ -2.06
EFCAB11-204ENST00000553871 CDK5Q00535 292 aa2.16□□□□□ -2.06
EFCAB11-204ENST00000553871 SEMG2Q02383 582 aa2.16□□□□□ -2.06
EFCAB11-204ENST00000553871 WDR43Q15061 677 aaKnown RBP eCLIP2.16□□□□□ -2.06
EFCAB11-204ENST00000553871 NCF4Q15080 339 aa2.16□□□□□ -2.06
EFCAB11-204ENST00000553871 TRMT5Q32P41 509 aaKnown RBP2.16□□□□□ -2.06
EFCAB11-204ENST00000553871 AP1ARQ63HQ0 302 aa2.16□□□□□ -2.06
EFCAB11-204ENST00000553871 SAXO2Q658L1 398 aa2.16□□□□□ -2.06
EFCAB11-204ENST00000553871 STUMQ69YW2 141 aa2.16□□□□□ -2.06
EFCAB11-204ENST00000553871 CLEC2AQ6UVW9 174 aa2.16□□□□□ -2.06
EFCAB11-204ENST00000553871 NTM-AS1Q6ZSK4 140 aa2.16□□□□□ -2.06
EFCAB11-204ENST00000553871 HORMAD1Q86X24 394 aa2.16□□□□□ -2.06
EFCAB11-204ENST00000553871 NPWQ8N729 165 aa2.16□□□□□ -2.06
EFCAB11-204ENST00000553871 OR4K5Q8NGD3 323 aa2.16□□□□□ -2.06
EFCAB11-204ENST00000553871 OR52E5Q8NH55 327 aa2.16□□□□□ -2.06
EFCAB11-204ENST00000553871 RGP1Q92546 391 aaPredicted RBP2.16□□□□□ -2.06
EFCAB11-204ENST00000553871 NRBF2Q96F24 287 aa2.16□□□□□ -2.06
EFCAB11-204ENST00000553871 OR10C1Q96KK4 312 aa2.16□□□□□ -2.06
EFCAB11-204ENST00000553871 ZNF488Q96MN9 340 aa2.16□□□□□ -2.06
EFCAB11-204ENST00000553871 COL21A1Q96P44 957 aa2.16□□□□□ -2.06
EFCAB11-204ENST00000553871 FOXC2Q99958 501 aa2.16□□□□□ -2.06
EFCAB11-204ENST00000553871 TMEM27Q9HBJ8 222 aa2.16□□□□□ -2.06
EFCAB11-204ENST00000553871 MRPS30Q9NP92 439 aaKnown RBP2.16□□□□□ -2.06
EFCAB11-204ENST00000553871 ACP6Q9NPH0 428 aa2.16□□□□□ -2.06
EFCAB11-204ENST00000553871 ZC4H2Q9NQZ6 224 aa2.16□□□□□ -2.06
EFCAB11-204ENST00000553871 PXMP2Q9NR77 195 aa2.16□□□□□ -2.06
EFCAB11-204ENST00000553871 PDP1Q9P0J1 537 aaPredicted RBP2.16□□□□□ -2.06
EFCAB11-204ENST00000553871 RABL2AQ9UBK7 228 aaPredicted RBP2.16□□□□□ -2.06
EFCAB11-204ENST00000553871 ENOPH1Q9UHY7 261 aa2.16□□□□□ -2.06
EFCAB11-204ENST00000553871 ZNFX1Q9P2E3 1918 aaKnown RBP2.15□□□□□ -2.06
EFCAB11-204ENST00000553871 A0A0U1RQV1 116 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms