RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 C19orf18Q8NEA5 215 aa15.37■□□□□ 0.05
SHMT2-206ENST00000553529 PROKR2Q8NFJ6 384 aa15.37■□□□□ 0.05
SHMT2-206ENST00000553529 GJC3Q8NFK1 279 aa15.37■□□□□ 0.05
SHMT2-206ENST00000553529 OR2T29Q8NH02 315 aa15.37■□□□□ 0.05
SHMT2-206ENST00000553529 COQ7Q99807 217 aa15.37■□□□□ 0.05
SHMT2-206ENST00000553529 GAL3ST1Q99999 423 aa15.37■□□□□ 0.05
SHMT2-206ENST00000553529 TRIM15Q9C019 465 aa15.37■□□□□ 0.05
SHMT2-206ENST00000553529 IL20Q9NYY1 176 aa15.37■□□□□ 0.05
SHMT2-206ENST00000553529 FAM183AA6NL82 134 aa15.36■□□□□ 0.05
SHMT2-206ENST00000553529 F5H5P2 479 aa15.36■□□□□ 0.05
SHMT2-206ENST00000553529 KRT36O76013 467 aa15.36■□□□□ 0.05
SHMT2-206ENST00000553529 CYB5R3P00387 301 aaPredicted RBP15.36■□□□□ 0.05
SHMT2-206ENST00000553529 IGHV2-70P01814 119 aa15.36■□□□□ 0.05
SHMT2-206ENST00000553529 SBK2P0C263 348 aa15.36■□□□□ 0.05
SHMT2-206ENST00000553529 SLC2A1P11166 492 aa15.36■□□□□ 0.05
SHMT2-206ENST00000553529 IFNGR2P38484 337 aa15.36■□□□□ 0.05
SHMT2-206ENST00000553529 PMELP40967 661 aa15.36■□□□□ 0.05
SHMT2-206ENST00000553529 TRAP1Q12931 704 aaKnown RBP15.36■□□□□ 0.05
SHMT2-206ENST00000553529 ZMYND11Q15326 602 aa15.36■□□□□ 0.05
SHMT2-206ENST00000553529 MOGQ16653 247 aa15.36■□□□□ 0.05
SHMT2-206ENST00000553529 MICAQ29983 383 aa15.36■□□□□ 0.05
SHMT2-206ENST00000553529 SPATS1Q496A3 300 aa15.36■□□□□ 0.05
SHMT2-206ENST00000553529 ARL9Q6T311 187 aa15.36■□□□□ 0.05
SHMT2-206ENST00000553529 ATG16L2Q8NAA4 619 aa15.36■□□□□ 0.05
SHMT2-206ENST00000553529 OR10G2Q8NGC3 310 aa15.36■□□□□ 0.05
SHMT2-206ENST00000553529 OR52L1Q8NGH7 329 aa15.36■□□□□ 0.05
SHMT2-206ENST00000553529 OR51F2Q8NH61 342 aa15.36■□□□□ 0.05
SHMT2-206ENST00000553529 OR2AE1Q8NHA4 323 aa15.36■□□□□ 0.05
SHMT2-206ENST00000553529 CANT1Q8WVQ1 401 aa15.36■□□□□ 0.05
SHMT2-206ENST00000553529 C19orf24Q9BVV8 132 aa15.36■□□□□ 0.05
SHMT2-206ENST00000553529 RBM4Q9BWF3 364 aaKnown RBP15.36■□□□□ 0.05
SHMT2-206ENST00000553529 CHID1Q9BWS9 393 aa15.36■□□□□ 0.05
SHMT2-206ENST00000553529 TMPRSS13Q9BYE2 586 aa15.36■□□□□ 0.05
SHMT2-206ENST00000553529 HDHD2Q9H0R4 259 aa15.36■□□□□ 0.05
SHMT2-206ENST00000553529 MAGIXQ9H6Y5 334 aa15.36■□□□□ 0.05
SHMT2-206ENST00000553529 TMEM106BQ9NUM4 274 aa15.36■□□□□ 0.05
SHMT2-206ENST00000553529 COMMD3-BMI1R4GMX3 469 aa15.36■□□□□ 0.05
SHMT2-206ENST00000553529 MXRA5Q9NR99 2828 aa15.35■□□□□ 0.05
SHMT2-206ENST00000553529 COL6A5A8TX70 2615 aa15.35■□□□□ 0.05
SHMT2-206ENST00000553529 H3BSA7 217 aa15.35■□□□□ 0.05
SHMT2-206ENST00000553529 HNF1AP20823 631 aa15.35■□□□□ 0.05
SHMT2-206ENST00000553529 MMP16P51512 607 aa15.35■□□□□ 0.05
SHMT2-206ENST00000553529 GK2Q14410 553 aaPredicted RBP15.35■□□□□ 0.05
SHMT2-206ENST00000553529 FBXW12Q6X9E4 464 aa15.35■□□□□ 0.05
SHMT2-206ENST00000553529 SPATA3Q8NHX4 192 aa15.35■□□□□ 0.05
SHMT2-206ENST00000553529 PTP4A1Q93096 173 aa15.35■□□□□ 0.05
SHMT2-206ENST00000553529 SLC7A6OSQ96CW6 309 aaPredicted RBP15.35■□□□□ 0.05
SHMT2-206ENST00000553529 ASB9Q96DX5 294 aa15.35■□□□□ 0.05
SHMT2-206ENST00000553529 ATF6BQ99941 703 aa15.35■□□□□ 0.05
SHMT2-206ENST00000553529 WACQ9BTA9 647 aa15.35■□□□□ 0.05
SHMT2-206ENST00000553529 REEP1Q9H902 201 aa15.35■□□□□ 0.05
SHMT2-206ENST00000553529 MMP26Q9NRE1 261 aa15.35■□□□□ 0.05
SHMT2-206ENST00000553529 CYSLTR2Q9NS75 346 aa15.35■□□□□ 0.05
SHMT2-206ENST00000553529 ZDHHC8Q9ULC8 765 aa15.35■□□□□ 0.05
SHMT2-206ENST00000553529 N6AMT1Q9Y5N5 214 aa15.35■□□□□ 0.05
SHMT2-206ENST00000553529 NPTNQ9Y639 398 aa15.35■□□□□ 0.05
SHMT2-206ENST00000553529 VENTXO95231 258 aa15.34■□□□□ 0.05
SHMT2-206ENST00000553529 SPARCP09486 303 aa15.34■□□□□ 0.05
SHMT2-206ENST00000553529 RAC2P15153 192 aa15.34■□□□□ 0.05
SHMT2-206ENST00000553529 PRKACGP22612 351 aa15.34■□□□□ 0.05
SHMT2-206ENST00000553529 MNAT1P51948 309 aa15.34■□□□□ 0.05
SHMT2-206ENST00000553529 SLC36A3Q495N2 470 aa15.34■□□□□ 0.05
SHMT2-206ENST00000553529 ACSM5Q6NUN0 579 aa15.34■□□□□ 0.05
SHMT2-206ENST00000553529 UNQ6126/PRO20091Q6UXV3 157 aa15.34■□□□□ 0.05
SHMT2-206ENST00000553529 COLCA1Q6ZS62 124 aa15.34■□□□□ 0.05
SHMT2-206ENST00000553529 DCXRQ7Z4W1 244 aa15.34■□□□□ 0.05
SHMT2-206ENST00000553529 LNX2Q8N448 690 aa15.34■□□□□ 0.05
SHMT2-206ENST00000553529 ZNF283Q8N7M2 679 aa15.34■□□□□ 0.05
SHMT2-206ENST00000553529 RAB1CQ92928 201 aa15.34■□□□□ 0.05
SHMT2-206ENST00000553529 APOBEC3DQ96AK3 386 aaPredicted RBP15.34■□□□□ 0.05
SHMT2-206ENST00000553529 SLCO4A1Q96BD0 722 aa15.34■□□□□ 0.05
SHMT2-206ENST00000553529 MEGF10Q96KG7 1140 aa15.34■□□□□ 0.05
SHMT2-206ENST00000553529 AMELYQ99218 206 aa15.34■□□□□ 0.05
SHMT2-206ENST00000553529 FEVQ99581 238 aa15.34■□□□□ 0.05
SHMT2-206ENST00000553529 REPIN1Q9BWE0 567 aaKnown RBP15.34■□□□□ 0.05
SHMT2-206ENST00000553529 CDADC1Q9BWV3 514 aa15.34■□□□□ 0.05
SHMT2-206ENST00000553529 C1QTNF5Q9BXJ0 243 aa15.34■□□□□ 0.05
SHMT2-206ENST00000553529 NMNAT2Q9BZQ4 307 aa15.34■□□□□ 0.05
SHMT2-206ENST00000553529 EGLN1Q9GZT9 426 aa15.34■□□□□ 0.05
SHMT2-206ENST00000553529 PPP1R3EQ9H7J1 279 aa15.34■□□□□ 0.05
SHMT2-206ENST00000553529 GCM1Q9NP62 436 aa15.34■□□□□ 0.05
SHMT2-206ENST00000553529 PRPF19Q9UMS4 504 aaKnown RBP15.34■□□□□ 0.05
SHMT2-206ENST00000553529 C3orf80F5H4A9 247 aa15.33■□□□□ 0.04
SHMT2-206ENST00000553529 LCATP04180 440 aa15.33■□□□□ 0.04
SHMT2-206ENST00000553529 SPI1P17947 270 aa15.33■□□□□ 0.04
SHMT2-206ENST00000553529 FAM98BQ52LJ0 330 aaKnown RBP15.33■□□□□ 0.04
SHMT2-206ENST00000553529 LINC01590Q5TEZ4 76 aa15.33■□□□□ 0.04
SHMT2-206ENST00000553529 PRAMEF6Q5VXH4 476 aa15.33■□□□□ 0.04
SHMT2-206ENST00000553529 TRPM8Q7Z2W7 1104 aa15.33■□□□□ 0.04
SHMT2-206ENST00000553529 MOGAT3Q86VF5 341 aa15.33■□□□□ 0.04
SHMT2-206ENST00000553529 OR8G5Q8NG78 346 aa15.33■□□□□ 0.04
SHMT2-206ENST00000553529 OR2AJ1Q8NGZ0 328 aa15.33■□□□□ 0.04
SHMT2-206ENST00000553529 C22orf15Q8WYQ4 148 aa15.33■□□□□ 0.04
SHMT2-206ENST00000553529 TMEM158Q8WZ71 300 aa15.33■□□□□ 0.04
SHMT2-206ENST00000553529 OPN4Q9UHM6 478 aa15.33■□□□□ 0.04
SHMT2-206ENST00000553529 IDH3BO43837 385 aa15.32■□□□□ 0.04
SHMT2-206ENST00000553529 PNPP00491 289 aa15.32■□□□□ 0.04
SHMT2-206ENST00000553529 CST1P01037 141 aa15.32■□□□□ 0.04
SHMT2-206ENST00000553529 RAP2AP10114 183 aa15.32■□□□□ 0.04
SHMT2-206ENST00000553529 PRKXP51817 358 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms