RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 A0A0U1RQV5 110 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 A0A1B0GVI7 797 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 FAM240BA0A1B0GVZ2 78 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 LOC107986453A0A1B0GWG9 222 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 DHRS7CA6NNS2 312 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 ZNF716A6NP11 495 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 ZNF724A8MTY0 619 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 G3V3Y1 287 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 ACOT7O00154 380 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 PLA2G10O15496 165 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 XRCC3O43542 346 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 SYT7O43581 403 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 ORC5O43913 435 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 WDPCPO95876 746 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 PAHP00439 452 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 CST2P09228 141 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 FOSL1P15407 271 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 ZNF708P17019 499 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 ADRA2CP18825 462 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 CCL1P22362 96 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 HLA-DMAP28067 261 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 NTF4P34130 210 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 RPS27P42677 84 aaKnown RBP6.45□□□□□ -1.38
ATXN3-221ENST00000553498 BTG1P62324 171 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 MFGE8Q08431 387 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-221ENST00000553498 SCRN3Q0VDG4 424 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 RNPS1Q15287 305 aaKnown RBP6.45□□□□□ -1.38
ATXN3-221ENST00000553498 P2RY14Q15391 338 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 RAB11BQ15907 218 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 C1orf100Q5SVJ3 147 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 TMEM69Q5SWH9 247 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 ZNF57Q68EA5 555 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-221ENST00000553498 SPINK14Q6IE38 97 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 FAM166AQ6J272 317 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 ANKRD16Q6P6B7 361 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 Q6ZSR3 168 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 DOK3Q7L591 496 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 LINGO2Q7L985 606 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-221ENST00000553498 LUZP2Q86TE4 346 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 YRDCQ86U90 279 aaKnown RBP6.45□□□□□ -1.38
ATXN3-221ENST00000553498 AKAP14Q86UN6 197 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 UBQLNLQ8IYU4 475 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 TOMM5Q8N4H5 51 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 ZIC4Q8N9L1 334 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 ZFP62Q8NB50 900 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-221ENST00000553498 MDS2Q8NDY4 140 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 DEFB124Q8NES8 71 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 OR10D3Q8NH80 312 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 SPTSSAQ969W0 71 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 PHF21AQ96BD5 680 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 SCMH1Q96GD3 660 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 SORCS2Q96PQ0 1159 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 ABHD1Q96SE0 405 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 GFI1Q99684 422 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 NUDT16L1Q9BRJ7 211 aaKnown RBP6.45□□□□□ -1.38
ATXN3-221ENST00000553498 MARVELD1Q9BSK0 173 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 SLC25A18Q9H1K4 315 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 RNF121Q9H920 327 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 NEK6Q9HC98 313 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 TMEM138Q9NPI0 162 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 DEPPQ9NTK1 212 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 RHBDL2Q9NX52 303 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 ANKRD10Q9NXR5 420 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 ASH2LQ9UBL3 628 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 FBLN5Q9UBX5 448 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 OR5V1Q9UGF6 321 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 IL17BQ9UHF5 180 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 ING1Q9UK53 422 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-221ENST00000553498 MCTS1Q9ULC4 181 aaKnown RBP6.45□□□□□ -1.38
ATXN3-221ENST00000553498 GTF2A1LQ9UNN4 478 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 TDRD6O60522 2096 aaKnown RBP6.45□□□□□ -1.38
ATXN3-221ENST00000553498 COL6A3P12111 3177 aa6.45□□□□□ -1.38
ATXN3-221ENST00000553498 VCANP13611 3396 aa6.44□□□□□ -1.38
ATXN3-221ENST00000553498 TP53BP1Q12888 1972 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-221ENST00000553498 TRAV8-7A0A075B6U6 113 aa6.44□□□□□ -1.38
ATXN3-221ENST00000553498 A0A0G2JMM0 328 aa6.44□□□□□ -1.38
ATXN3-221ENST00000553498 A0A1W2PPB8 328 aa6.44□□□□□ -1.38
ATXN3-221ENST00000553498 A0A1W2PRS3 328 aa6.44□□□□□ -1.38
ATXN3-221ENST00000553498 KIR3DP1A8MWS1 328 aa6.44□□□□□ -1.38
ATXN3-221ENST00000553498 SULT1C2O00338 296 aa6.44□□□□□ -1.38
ATXN3-221ENST00000553498 CXCL13O43927 109 aa6.44□□□□□ -1.38
ATXN3-221ENST00000553498 RAMP1O60894 148 aa6.44□□□□□ -1.38
ATXN3-221ENST00000553498 MTRF1O75570 445 aaKnown RBP6.44□□□□□ -1.38
ATXN3-221ENST00000553498 SYNGR4O95473 234 aa6.44□□□□□ -1.38
ATXN3-221ENST00000553498 TTRP02766 147 aa6.44□□□□□ -1.38
ATXN3-221ENST00000553498 OPN1LWP04000 364 aa6.44□□□□□ -1.38
ATXN3-221ENST00000553498 MAS1P04201 325 aa6.44□□□□□ -1.38
ATXN3-221ENST00000553498 ALDOBP05062 364 aa6.44□□□□□ -1.38
ATXN3-221ENST00000553498 ACSM4P0C7M7 580 aa6.44□□□□□ -1.38
ATXN3-221ENST00000553498 RFPL3SP0C7P2 107 aa6.44□□□□□ -1.38
ATXN3-221ENST00000553498 UBBP0CG47 229 aa6.44□□□□□ -1.38
ATXN3-221ENST00000553498 TCEA1P23193 301 aaKnown RBP6.44□□□□□ -1.38
ATXN3-221ENST00000553498 HTR2CP28335 458 aa6.44□□□□□ -1.38
ATXN3-221ENST00000553498 SLC6A1P30531 599 aa6.44□□□□□ -1.38
ATXN3-221ENST00000553498 OTX1P32242 354 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-221ENST00000553498 FAUP35544 74 aaKnown RBP6.44□□□□□ -1.38
ATXN3-221ENST00000553498 DDOSTP39656 456 aa6.44□□□□□ -1.38
ATXN3-221ENST00000553498 LHX2P50458 406 aa6.44□□□□□ -1.38
ATXN3-221ENST00000553498 CLDN6P56747 220 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms