RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 RASSF2P50749 326 aa16.35■□□□□ 0.21
PTCH1-227ENST00000553256 LMO4P61968 165 aa16.35■□□□□ 0.21
PTCH1-227ENST00000553256 ECH1Q13011 328 aa16.35■□□□□ 0.21
PTCH1-227ENST00000553256 HLXQ14774 488 aaPredicted RBP16.35■□□□□ 0.21
PTCH1-227ENST00000553256 APOBEC3DQ96AK3 386 aaPredicted RBP16.35■□□□□ 0.21
PTCH1-227ENST00000553256 COG8Q96MW5 612 aa16.35■□□□□ 0.21
PTCH1-227ENST00000553256 ATF6BQ99941 703 aa16.35■□□□□ 0.21
PTCH1-227ENST00000553256 YY1AP1Q9H869 796 aa16.35■□□□□ 0.21
PTCH1-227ENST00000553256 POLR1DQ9Y2S0 133 aa16.35■□□□□ 0.21
PTCH1-227ENST00000553256 IGHV1-69-2A0A0G2JMI3 117 aa16.34■□□□□ 0.21
PTCH1-227ENST00000553256 C5orf63A6NC05 138 aa16.34■□□□□ 0.21
PTCH1-227ENST00000553256 FAM183AA6NL82 134 aa16.34■□□□□ 0.21
PTCH1-227ENST00000553256 SURF4O15260 269 aa16.34■□□□□ 0.21
PTCH1-227ENST00000553256 SPRY3O43610 288 aa16.34■□□□□ 0.21
PTCH1-227ENST00000553256 IGFBP5P24593 272 aa16.34■□□□□ 0.21
PTCH1-227ENST00000553256 DAPP51397 102 aa16.34■□□□□ 0.21
PTCH1-227ENST00000553256 CHN2P52757 468 aa16.34■□□□□ 0.21
PTCH1-227ENST00000553256 PPP2R2BQ00005 443 aa16.34■□□□□ 0.21
PTCH1-227ENST00000553256 HNRNPA0Q13151 305 aaKnown RBP16.34■□□□□ 0.21
PTCH1-227ENST00000553256 GINS1Q14691 196 aa16.34■□□□□ 0.21
PTCH1-227ENST00000553256 ATP6AP1Q15904 470 aa16.34■□□□□ 0.21
PTCH1-227ENST00000553256 TSTQ16762 297 aaKnown RBP16.34■□□□□ 0.21
PTCH1-227ENST00000553256 SLC27A4Q6P1M0 643 aa16.34■□□□□ 0.21
PTCH1-227ENST00000553256 USP51Q70EK9 711 aa16.34■□□□□ 0.21
PTCH1-227ENST00000553256 PARP8Q8N3A8 854 aa16.34■□□□□ 0.21
PTCH1-227ENST00000553256 CLDND2Q8NHS1 167 aa16.34■□□□□ 0.21
PTCH1-227ENST00000553256 TEX47Q8TBZ9 253 aa16.34■□□□□ 0.21
PTCH1-227ENST00000553256 MED20Q9H944 212 aa16.34■□□□□ 0.21
PTCH1-227ENST00000553256 SLC25A19Q9HC21 320 aa16.34■□□□□ 0.21
PTCH1-227ENST00000553256 ZDHHC8Q9ULC8 765 aa16.34■□□□□ 0.21
PTCH1-227ENST00000553256 GNGT2O14610 69 aa16.33■□□□□ 0.2
PTCH1-227ENST00000553256 CDC14BO60729 498 aa16.33■□□□□ 0.2
PTCH1-227ENST00000553256 DEAF1O75398 565 aaPredicted RBP16.33■□□□□ 0.2
PTCH1-227ENST00000553256 SLC2A5P22732 501 aa16.33■□□□□ 0.2
PTCH1-227ENST00000553256 GPR6P46095 362 aaPredicted RBP16.33■□□□□ 0.2
PTCH1-227ENST00000553256 ENTPD1P49961 510 aa16.33■□□□□ 0.2
PTCH1-227ENST00000553256 CDH15P55291 814 aa16.33■□□□□ 0.2
PTCH1-227ENST00000553256 TIGD4Q8IY51 512 aa16.33■□□□□ 0.2
PTCH1-227ENST00000553256 DIRC2Q96SL1 478 aa16.33■□□□□ 0.2
PTCH1-227ENST00000553256 PITX2Q99697 317 aa16.33■□□□□ 0.2
PTCH1-227ENST00000553256 SAP30LQ9HAJ7 183 aa16.33■□□□□ 0.2
PTCH1-227ENST00000553256 RIIAD1A6NNX1 92 aa16.32■□□□□ 0.2
PTCH1-227ENST00000553256 H3BN98 237 aa16.32■□□□□ 0.2
PTCH1-227ENST00000553256 E2F6O75461 281 aa16.32■□□□□ 0.2
PTCH1-227ENST00000553256 IFNGP01579 166 aa16.32■□□□□ 0.2
PTCH1-227ENST00000553256 HLA-DQA2P01906 255 aa16.32■□□□□ 0.2
PTCH1-227ENST00000553256 MT-ND5P03915 603 aa16.32■□□□□ 0.2
PTCH1-227ENST00000553256 ZNF823P16415 610 aa16.32■□□□□ 0.2
PTCH1-227ENST00000553256 ZNF3P17036 446 aa16.32■□□□□ 0.2
PTCH1-227ENST00000553256 FMO3P31513 532 aa16.32■□□□□ 0.2
PTCH1-227ENST00000553256 RBMXP38159 391 aaKnown RBP16.32■□□□□ 0.2
PTCH1-227ENST00000553256 EFNB1P98172 346 aa16.32■□□□□ 0.2
PTCH1-227ENST00000553256 DCXRQ7Z4W1 244 aa16.32■□□□□ 0.2
PTCH1-227ENST00000553256 OR2AJ1Q8NGZ0 328 aa16.32■□□□□ 0.2
PTCH1-227ENST00000553256 OR5K1Q8NHB7 308 aa16.32■□□□□ 0.2
PTCH1-227ENST00000553256 CDADC1Q9BWV3 514 aa16.32■□□□□ 0.2
PTCH1-227ENST00000553256 TANC2Q9HCD6 1990 aa16.32■□□□□ 0.2
PTCH1-227ENST00000553256 DCAF16Q9NXF7 216 aa16.32■□□□□ 0.2
PTCH1-227ENST00000553256 PTTG3PQ9NZH4 202 aa16.32■□□□□ 0.2
PTCH1-227ENST00000553256 PLSCR5A0PG75 271 aa16.31■□□□□ 0.2
PTCH1-227ENST00000553256 KIAA1324LA8MWY0 1029 aaPredicted RBP16.31■□□□□ 0.2
PTCH1-227ENST00000553256 IQCF6A8MYZ5 107 aa16.31■□□□□ 0.2
PTCH1-227ENST00000553256 FAM157AC9JC47 383 aa16.31■□□□□ 0.2
PTCH1-227ENST00000553256 F5H5K5 113 aa16.31■□□□□ 0.2
PTCH1-227ENST00000553256 ZNF593O00488 134 aaPredicted RBP16.31■□□□□ 0.2
PTCH1-227ENST00000553256 TIMM8AO60220 97 aaPredicted RBP16.31■□□□□ 0.2
PTCH1-227ENST00000553256 GLCEO94923 617 aa16.31■□□□□ 0.2
PTCH1-227ENST00000553256 BLVRAP53004 296 aa16.31■□□□□ 0.2
PTCH1-227ENST00000553256 GK2Q14410 553 aaPredicted RBP16.31■□□□□ 0.2
PTCH1-227ENST00000553256 ZMAT1Q5H9K5 638 aa16.31■□□□□ 0.2
PTCH1-227ENST00000553256 TMEM236Q5W0B7 351 aa16.31■□□□□ 0.2
PTCH1-227ENST00000553256 OR2T2Q6IF00 324 aa16.31■□□□□ 0.2
PTCH1-227ENST00000553256 PRSS45Q7RTY3 260 aa16.31■□□□□ 0.2
PTCH1-227ENST00000553256 DNAJC9Q8WXX5 260 aa16.31■□□□□ 0.2
PTCH1-227ENST00000553256 SIGLEC11Q96RL6 698 aa16.31■□□□□ 0.2
PTCH1-227ENST00000553256 AMELYQ99218 206 aa16.31■□□□□ 0.2
PTCH1-227ENST00000553256 SLC30A2Q9BRI3 323 aa16.31■□□□□ 0.2
PTCH1-227ENST00000553256 GABARAPL1Q9H0R8 117 aa16.31■□□□□ 0.2
PTCH1-227ENST00000553256 LOC100289279A0A1B0GTE1 492 aa16.3■□□□□ 0.2
PTCH1-227ENST00000553256 M0R135 149 aa16.3■□□□□ 0.2
PTCH1-227ENST00000553256 MLNRO43193 412 aa16.3■□□□□ 0.2
PTCH1-227ENST00000553256 LMX1BO60663 402 aa16.3■□□□□ 0.2
PTCH1-227ENST00000553256 EPHA2P29317 976 aa16.3■□□□□ 0.2
PTCH1-227ENST00000553256 SNAI3Q3KNW1 292 aa16.3■□□□□ 0.2
PTCH1-227ENST00000553256 KDM4DQ6B0I6 523 aa16.3■□□□□ 0.2
PTCH1-227ENST00000553256 OR8G5Q8NG78 346 aa16.3■□□□□ 0.2
PTCH1-227ENST00000553256 OR5L1Q8NGL2 311 aa16.3■□□□□ 0.2
PTCH1-227ENST00000553256 RNF133Q8WVZ7 376 aa16.3■□□□□ 0.2
PTCH1-227ENST00000553256 SLAMF6Q96DU3 332 aa16.3■□□□□ 0.2
PTCH1-227ENST00000553256 ELMOD3Q96FG2 381 aa16.3■□□□□ 0.2
PTCH1-227ENST00000553256 ZNF799Q96GE5 643 aa16.3■□□□□ 0.2
PTCH1-227ENST00000553256 DECR2Q9NUI1 292 aa16.3■□□□□ 0.2
PTCH1-227ENST00000553256 TMEFF2Q9UIK5 374 aaPredicted RBP16.3■□□□□ 0.2
PTCH1-227ENST00000553256 WIPI2Q9Y4P8 454 aa16.3■□□□□ 0.2
PTCH1-227ENST00000553256 AP4S1Q9Y587 144 aa16.3■□□□□ 0.2
PTCH1-227ENST00000553256 PPIHO43447 177 aaKnown RBP16.29■□□□□ 0.2
PTCH1-227ENST00000553256 HMGN1P05114 100 aa16.29■□□□□ 0.2
PTCH1-227ENST00000553256 POU1F1P28069 291 aa16.29■□□□□ 0.2
PTCH1-227ENST00000553256 CRISP1P54107 249 aa16.29■□□□□ 0.2
PTCH1-227ENST00000553256 C1orf146Q5VVC0 180 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms