RNA–Protein interactions for RNA: ENST00000552713.5

CDK4-213, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-213ENST00000552713 COL7A1Q02388 2944 aa6.97□□□□□ -1.29
CDK4-213ENST00000552713 LOC100653049A0A140TA62 436 aa6.97□□□□□ -1.29
CDK4-213ENST00000552713 NPIPB13A6NJU9 1138 aa6.97□□□□□ -1.29
CDK4-213ENST00000552713 C12orf71A8MTZ7 269 aa6.97□□□□□ -1.29
CDK4-213ENST00000552713 NPIPB4C9JG80 1138 aa6.97□□□□□ -1.29
CDK4-213ENST00000552713 FBP2O00757 339 aa6.97□□□□□ -1.29
CDK4-213ENST00000552713 SGCEO43556 437 aa6.97□□□□□ -1.29
CDK4-213ENST00000552713 KRT34O76011 436 aa6.97□□□□□ -1.29
CDK4-213ENST00000552713 TUBG1P23258 451 aa6.97□□□□□ -1.29
CDK4-213ENST00000552713 RPL27P61353 136 aaKnown RBP6.97□□□□□ -1.29
CDK4-213ENST00000552713 SF3A3Q12874 501 aaKnown RBP eCLIP6.97□□□□□ -1.295e-9■□□□□ 11.1
CDK4-213ENST00000552713 FHL1Q13642 323 aa6.97□□□□□ -1.29
CDK4-213ENST00000552713 CCDC92Q53HC0 331 aaPredicted RBP6.97□□□□□ -1.29
CDK4-213ENST00000552713 METTL11BQ5VVY1 283 aa6.97□□□□□ -1.29
CDK4-213ENST00000552713 DLEU7Q6UYE1 221 aa6.97□□□□□ -1.29
CDK4-213ENST00000552713 FBXW12Q6X9E4 464 aa6.97□□□□□ -1.29
CDK4-213ENST00000552713 C1orf122Q6ZSJ8 110 aa6.97□□□□□ -1.29
CDK4-213ENST00000552713 SYT9Q86SS6 491 aa6.97□□□□□ -1.29
CDK4-213ENST00000552713 BOLLQ8N9W6 283 aaKnown RBP6.97□□□□□ -1.29
CDK4-213ENST00000552713 PPP1R35Q8TAP8 253 aa6.97□□□□□ -1.29
CDK4-213ENST00000552713 LIPHQ8WWY8 451 aa6.97□□□□□ -1.29
CDK4-213ENST00000552713 CFHR4Q92496 578 aa6.97□□□□□ -1.29
CDK4-213ENST00000552713 SGCDQ92629 289 aa6.97□□□□□ -1.29
CDK4-213ENST00000552713 PPP1R14AQ96A00 147 aa6.97□□□□□ -1.29
CDK4-213ENST00000552713 PHF21AQ96BD5 680 aa6.97□□□□□ -1.29
CDK4-213ENST00000552713 SPDL1Q96EA4 605 aa6.97□□□□□ -1.29
CDK4-213ENST00000552713 RBP7Q96R05 134 aa6.97□□□□□ -1.29
CDK4-213ENST00000552713 DPAGT1Q9H3H5 408 aa6.97□□□□□ -1.29
CDK4-213ENST00000552713 MMADHCQ9H3L0 296 aaPredicted RBP6.97□□□□□ -1.29
CDK4-213ENST00000552713 TUBG2Q9NRH3 451 aa6.97□□□□□ -1.29
CDK4-213ENST00000552713 NECAP2Q9NVZ3 263 aa6.97□□□□□ -1.29
CDK4-213ENST00000552713 ZNRD1Q9P1U0 126 aa6.97□□□□□ -1.29
CDK4-213ENST00000552713 STX18Q9P2W9 335 aaKnown RBP6.97□□□□□ -1.29
CDK4-213ENST00000552713 VPREB3Q9UKI3 123 aa6.97□□□□□ -1.29
CDK4-213ENST00000552713 A0A1B0GW55 424 aa6.96□□□□□ -1.3
CDK4-213ENST00000552713 A0A1B0GWJ7 208 aa6.96□□□□□ -1.3
CDK4-213ENST00000552713 A0A1W2PRD5 423 aa6.96□□□□□ -1.3
CDK4-213ENST00000552713 A0A1W2PRF3 423 aa6.96□□□□□ -1.3
CDK4-213ENST00000552713 A0A1W2PRM7 423 aa6.96□□□□□ -1.3
CDK4-213ENST00000552713 MEGF11A6BM72 1044 aa6.96□□□□□ -1.3
CDK4-213ENST00000552713 OR6C6A6NF89 314 aa6.96□□□□□ -1.3
CDK4-213ENST00000552713 LRRC30A6NM36 301 aa6.96□□□□□ -1.3
CDK4-213ENST00000552713 IQCF6A8MYZ5 107 aa6.96□□□□□ -1.3
CDK4-213ENST00000552713 IMPA2O14732 288 aa6.96□□□□□ -1.3
CDK4-213ENST00000552713 POLR3GO15318 223 aaPredicted RBP6.96□□□□□ -1.3
CDK4-213ENST00000552713 ADAM20O43506 726 aa6.96□□□□□ -1.3
CDK4-213ENST00000552713 OR10H3O60404 316 aa6.96□□□□□ -1.3
CDK4-213ENST00000552713 MPIG6BO95866 241 aa6.96□□□□□ -1.3
CDK4-213ENST00000552713 LIPFP07098 398 aa6.96□□□□□ -1.3
CDK4-213ENST00000552713 DUX4L2P0CJ85 424 aa6.96□□□□□ -1.3
CDK4-213ENST00000552713 DUX4L3P0CJ86 424 aa6.96□□□□□ -1.3
CDK4-213ENST00000552713 DUX4L4P0CJ87 422 aa6.96□□□□□ -1.3
CDK4-213ENST00000552713 DUX4L5P0CJ88 424 aa6.96□□□□□ -1.3
CDK4-213ENST00000552713 DUX4L6P0CJ89 424 aa6.96□□□□□ -1.3
CDK4-213ENST00000552713 DUX4L7P0CJ90 424 aa6.96□□□□□ -1.3
CDK4-213ENST00000552713 PPIBP23284 216 aaKnown RBP6.96□□□□□ -1.3
CDK4-213ENST00000552713 GATA4P43694 442 aa6.96□□□□□ -1.3
CDK4-213ENST00000552713 EFNB2P52799 333 aa6.96□□□□□ -1.3
CDK4-213ENST00000552713 RAD23AP54725 363 aa6.96□□□□□ -1.3
CDK4-213ENST00000552713 MTPNP58546 118 aa6.96□□□□□ -1.3
CDK4-213ENST00000552713 CTXN1P60606 82 aa6.96□□□□□ -1.3
CDK4-213ENST00000552713 STX1BP61266 288 aa6.96□□□□□ -1.3
CDK4-213ENST00000552713 ELF3P78545 371 aaPredicted RBP6.96□□□□□ -1.3
CDK4-213ENST00000552713 POU4F2Q12837 409 aa6.96□□□□□ -1.3
CDK4-213ENST00000552713 PIN1Q13526 163 aaPredicted RBP6.96□□□□□ -1.3
CDK4-213ENST00000552713 ALG10Q5BKT4 473 aa6.96□□□□□ -1.3
CDK4-213ENST00000552713 DUX4L9Q6RFH8 374 aaPredicted RBP6.96□□□□□ -1.3
CDK4-213ENST00000552713 Q6ZTK2 550 aa6.96□□□□□ -1.3
CDK4-213ENST00000552713 BTN2A1Q7KYR7 527 aa6.96□□□□□ -1.3
CDK4-213ENST00000552713 HDXQ7Z353 690 aa6.96□□□□□ -1.3
CDK4-213ENST00000552713 VMO1Q7Z5L0 202 aa6.96□□□□□ -1.3
CDK4-213ENST00000552713 MICU2Q8IYU8 434 aa6.96□□□□□ -1.3
CDK4-213ENST00000552713 C1orf87Q8N0U7 546 aa6.96□□□□□ -1.3
CDK4-213ENST00000552713 PNKDQ8N490 385 aa6.96□□□□□ -1.3
CDK4-213ENST00000552713 C11orf65Q8NCR3 313 aa6.96□□□□□ -1.3
CDK4-213ENST00000552713 Q8TCH9 128 aa6.96□□□□□ -1.3
CDK4-213ENST00000552713 TMEM239Q8WW34 195 aa6.96□□□□□ -1.3
CDK4-213ENST00000552713 MAGEB18Q96M61 343 aa6.96□□□□□ -1.3
CDK4-213ENST00000552713 C7orf26Q96N11 449 aa6.96□□□□□ -1.3
CDK4-213ENST00000552713 ZNF582Q96NG8 517 aaPredicted RBP6.96□□□□□ -1.3
CDK4-213ENST00000552713 PPA2Q9H2U2 334 aa6.96□□□□□ -1.3
CDK4-213ENST00000552713 INTS9Q9NV88 658 aaKnown RBP6.96□□□□□ -1.3
CDK4-213ENST00000552713 CCDC167Q9P0B6 97 aa6.96□□□□□ -1.3
CDK4-213ENST00000552713 KIF17Q9P2E2 1029 aa6.96□□□□□ -1.3
CDK4-213ENST00000552713 ERVK-18Q9QC07 812 aa6.96□□□□□ -1.3
CDK4-213ENST00000552713 DNAJB11Q9UBS4 358 aa6.96□□□□□ -1.3
CDK4-213ENST00000552713 DUX4Q9UBX2 424 aa6.96□□□□□ -1.3
CDK4-213ENST00000552713 FBLN5Q9UBX5 448 aa6.96□□□□□ -1.3
CDK4-213ENST00000552713 HIF3AQ9Y2N7 669 aa6.96□□□□□ -1.3
CDK4-213ENST00000552713 TRAV27A0A087WT01 109 aa6.95□□□□□ -1.3
CDK4-213ENST00000552713 ELOVL7A1L3X0 281 aa6.95□□□□□ -1.3
CDK4-213ENST00000552713 GMNCA6NCL1 334 aa6.95□□□□□ -1.3
CDK4-213ENST00000552713 EVPLLA8MZ36 301 aa6.95□□□□□ -1.3
CDK4-213ENST00000552713 K7EIL1 84 aa6.95□□□□□ -1.3
CDK4-213ENST00000552713 LGALS8O00214 317 aa6.95□□□□□ -1.3
CDK4-213ENST00000552713 RER1O15258 196 aa6.95□□□□□ -1.3
CDK4-213ENST00000552713 GYPAP02724 150 aa6.95□□□□□ -1.3
CDK4-213ENST00000552713 CTLA4P16410 223 aa6.95□□□□□ -1.3
CDK4-213ENST00000552713 ANOS1P23352 680 aa6.95□□□□□ -1.3
CDK4-213ENST00000552713 FPR3P25089 353 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms