RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 TWIST1Q15672 202 aa3.49□□□□□ -1.85
USP44-208ENST00000552440 WDR25Q64LD2 544 aaPredicted RBP3.49□□□□□ -1.85
USP44-208ENST00000552440 ZNF530Q6P9A1 599 aaPredicted RBP3.49□□□□□ -1.85
USP44-208ENST00000552440 PIP4P1Q86T03 277 aa3.49□□□□□ -1.85
USP44-208ENST00000552440 KIRREL3Q8IZU9 778 aa3.49□□□□□ -1.85
USP44-208ENST00000552440 BLIDQ8IZY5 108 aa3.49□□□□□ -1.85
USP44-208ENST00000552440 ACOT4Q8N9L9 421 aa3.49□□□□□ -1.85
USP44-208ENST00000552440 ZNF383Q8NA42 475 aa3.49□□□□□ -1.85
USP44-208ENST00000552440 DOK4Q8TEW6 326 aa3.49□□□□□ -1.85
USP44-208ENST00000552440 GATAD1Q8WUU5 269 aa3.49□□□□□ -1.85
USP44-208ENST00000552440 RAB8BQ92930 207 aa3.49□□□□□ -1.85
USP44-208ENST00000552440 TESCQ96BS2 214 aa3.49□□□□□ -1.85
USP44-208ENST00000552440 ADGRG7Q96K78 797 aa3.49□□□□□ -1.85
USP44-208ENST00000552440 ZNF681Q96N22 645 aa3.49□□□□□ -1.85
USP44-208ENST00000552440 SCGB3A2Q96PL1 93 aa3.49□□□□□ -1.85
USP44-208ENST00000552440 TBX15Q96SF7 602 aa3.49□□□□□ -1.85
USP44-208ENST00000552440 TSNAXQ99598 290 aaKnown RBP3.49□□□□□ -1.85
USP44-208ENST00000552440 NKX3-1Q99801 234 aaPredicted RBP3.49□□□□□ -1.85
USP44-208ENST00000552440 FAM173AQ9BQD7 235 aa3.49□□□□□ -1.85
USP44-208ENST00000552440 HES7Q9BYE0 225 aa3.49□□□□□ -1.85
USP44-208ENST00000552440 CHIAQ9BZP6 476 aa3.49□□□□□ -1.85
USP44-208ENST00000552440 TRIM4Q9C037 500 aa3.49□□□□□ -1.85
USP44-208ENST00000552440 PRSS22Q9GZN4 317 aa3.49□□□□□ -1.85
USP44-208ENST00000552440 CSTL1Q9H114 145 aa3.49□□□□□ -1.85
USP44-208ENST00000552440 TLNRD1Q9H1K6 362 aa3.49□□□□□ -1.85
USP44-208ENST00000552440 PPDPFQ9H3Y8 114 aa3.49□□□□□ -1.85
USP44-208ENST00000552440 ZNF385DQ9H6B1 395 aa3.49□□□□□ -1.85
USP44-208ENST00000552440 PLEKHA3Q9HB20 300 aa3.49□□□□□ -1.85
USP44-208ENST00000552440 ACOT13Q9NPJ3 140 aa3.49□□□□□ -1.85
USP44-208ENST00000552440 TIGARQ9NQ88 270 aa3.49□□□□□ -1.85
USP44-208ENST00000552440 DDX19AQ9NUU7 478 aaKnown RBP3.49□□□□□ -1.85
USP44-208ENST00000552440 CMTM6Q9NX76 183 aa3.49□□□□□ -1.85
USP44-208ENST00000552440 TAS2R16Q9NYV7 291 aa3.49□□□□□ -1.85
USP44-208ENST00000552440 ING4Q9UNL4 249 aa3.49□□□□□ -1.85
USP44-208ENST00000552440 FARSAQ9Y285 508 aaKnown RBP3.49□□□□□ -1.85
USP44-208ENST00000552440 NTNG1Q9Y2I2 539 aa3.49□□□□□ -1.85
USP44-208ENST00000552440 RICTORQ6R327 1708 aa3.49□□□□□ -1.85
USP44-208ENST00000552440 FLT4P35916 1363 aa3.49□□□□□ -1.85
USP44-208ENST00000552440 MTUS2Q5JR59 1369 aa3.49□□□□□ -1.85
USP44-208ENST00000552440 IGLV9-49A0A0B4J1Y8 123 aa3.48□□□□□ -1.85
USP44-208ENST00000552440 A0A1B0GV72 72 aa3.48□□□□□ -1.85
USP44-208ENST00000552440 ZNF729A6NN14 1252 aaPredicted RBP3.48□□□□□ -1.85
USP44-208ENST00000552440 PSMD12O00232 456 aaPredicted RBP3.48□□□□□ -1.85
USP44-208ENST00000552440 CTSVO60911 334 aa3.48□□□□□ -1.85
USP44-208ENST00000552440 CD74P04233 296 aa3.48□□□□□ -1.85
USP44-208ENST00000552440 GUSBP08236 651 aa3.48□□□□□ -1.85
USP44-208ENST00000552440 LINC00271P0C7V0 271 aa3.48□□□□□ -1.85
USP44-208ENST00000552440 HLA-DOBP13765 273 aa3.48□□□□□ -1.85
USP44-208ENST00000552440 NTSP30990 170 aa3.48□□□□□ -1.85
USP44-208ENST00000552440 PTGDSP41222 190 aa3.48□□□□□ -1.85
USP44-208ENST00000552440 KIR2DS4P43632 304 aa3.48□□□□□ -1.85
USP44-208ENST00000552440 RIDAP52758 137 aaKnown RBP3.48□□□□□ -1.85
USP44-208ENST00000552440 ERVPABLB-1P60509 514 aa3.48□□□□□ -1.85
USP44-208ENST00000552440 RND3P61587 244 aa3.48□□□□□ -1.85
USP44-208ENST00000552440 CD164Q04900 197 aa3.48□□□□□ -1.85
USP44-208ENST00000552440 ST3GAL4Q11206 333 aa3.48□□□□□ -1.85
USP44-208ENST00000552440 KLF9Q13886 244 aaPredicted RBP3.48□□□□□ -1.85
USP44-208ENST00000552440 PRPSAP1Q14558 356 aa3.48□□□□□ -1.85
USP44-208ENST00000552440 SMCO1Q147U7 214 aa3.48□□□□□ -1.85
USP44-208ENST00000552440 OTUD1Q5VV17 481 aaPredicted RBP3.48□□□□□ -1.85
USP44-208ENST00000552440 TRIQKQ629K1 86 aa3.48□□□□□ -1.85
USP44-208ENST00000552440 ZNF544Q6NX49 715 aa3.48□□□□□ -1.85
USP44-208ENST00000552440 TRIM40Q6P9F5 258 aa3.48□□□□□ -1.85
USP44-208ENST00000552440 FAM131AQ6UXB0 335 aa3.48□□□□□ -1.85
USP44-208ENST00000552440 WDR82Q6UXN9 313 aa3.48□□□□□ -1.85
USP44-208ENST00000552440 C12orf29Q8N999 325 aa3.48□□□□□ -1.85
USP44-208ENST00000552440 KBTBD8Q8NFY9 601 aa3.48□□□□□ -1.85
USP44-208ENST00000552440 OR2G2Q8NGZ5 317 aa3.48□□□□□ -1.85
USP44-208ENST00000552440 MPLKIPQ8TAP9 179 aa3.48□□□□□ -1.85
USP44-208ENST00000552440 CRYGNQ8WXF5 182 aa3.48□□□□□ -1.85
USP44-208ENST00000552440 MS4A14Q96JA4 679 aa3.48□□□□□ -1.85
USP44-208ENST00000552440 SLC25A33Q9BSK2 321 aa3.48□□□□□ -1.85
USP44-208ENST00000552440 TMEM208Q9BTX3 173 aa3.48□□□□□ -1.85
USP44-208ENST00000552440 TMEM109Q9BVC6 243 aa3.48□□□□□ -1.85
USP44-208ENST00000552440 UGT2B28Q9BY64 529 aa3.48□□□□□ -1.85
USP44-208ENST00000552440 PCBD2Q9H0N5 130 aa3.48□□□□□ -1.85
USP44-208ENST00000552440 SIAEQ9HAT2 523 aa3.48□□□□□ -1.85
USP44-208ENST00000552440 NMUR1Q9HB89 426 aa3.48□□□□□ -1.85
USP44-208ENST00000552440 ADGRL4Q9HBW9 690 aa3.48□□□□□ -1.85
USP44-208ENST00000552440 MEPEQ9NQ76 525 aaPredicted RBP3.48□□□□□ -1.85
USP44-208ENST00000552440 FBXO6Q9NRD1 293 aaPredicted RBP3.48□□□□□ -1.85
USP44-208ENST00000552440 PARVAQ9NVD7 372 aa3.48□□□□□ -1.85
USP44-208ENST00000552440 ZNF224Q9NZL3 707 aa3.48□□□□□ -1.85
USP44-208ENST00000552440 ENOPH1Q9UHY7 261 aa3.48□□□□□ -1.85
USP44-208ENST00000552440 GNPTGQ9UJJ9 305 aa3.48□□□□□ -1.85
USP44-208ENST00000552440 PPP2R2CQ9Y2T4 447 aa3.48□□□□□ -1.85
USP44-208ENST00000552440 CPQQ9Y646 472 aa3.48□□□□□ -1.85
USP44-208ENST00000552440 ABCC11Q96J66 1382 aa3.48□□□□□ -1.85
USP44-208ENST00000552440 CDK12Q9NYV4 1490 aaPredicted RBP3.48□□□□□ -1.85
USP44-208ENST00000552440 MEIOCA2RUB1 952 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 EFCAB10A6NFE3 127 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 EFCAB9A8MZ26 197 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 ANKRD63C9JTQ0 380 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 PRSS44E7EML9 344 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 KPNA3O00505 521 aaPredicted RBP3.47□□□□□ -1.85
USP44-208ENST00000552440 CRXO43186 299 aaPredicted RBP3.47□□□□□ -1.85
USP44-208ENST00000552440 RGS14O43566 566 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 UGT1A9O60656 530 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 RAD1O60671 282 aa3.47□□□□□ -1.85
USP44-208ENST00000552440 GATBO75879 557 aaKnown RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms