RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 HNRNPA0Q13151 305 aaKnown RBP6.39□□□□□ -1.39
NEK3-201ENST00000550331 KRR1Q13601 381 aaKnown RBP6.39□□□□□ -1.39
NEK3-201ENST00000550331 KCNMB1Q16558 191 aa6.39□□□□□ -1.39
NEK3-201ENST00000550331 ZNF181Q2M3W8 571 aa6.39□□□□□ -1.39
NEK3-201ENST00000550331 HIST2H2BDQ6DRA6 164 aa6.39□□□□□ -1.39
NEK3-201ENST00000550331 GPR139Q6DWJ6 353 aa6.39□□□□□ -1.39
NEK3-201ENST00000550331 PGM2L1Q6PCE3 622 aa6.39□□□□□ -1.39
NEK3-201ENST00000550331 LRRN1Q6UXK5 716 aa6.39□□□□□ -1.39
NEK3-201ENST00000550331 FBXW12Q6X9E4 464 aa6.39□□□□□ -1.39
NEK3-201ENST00000550331 C9orf139Q6ZV77 190 aa6.39□□□□□ -1.39
NEK3-201ENST00000550331 RRM2BQ7LG56 351 aa6.39□□□□□ -1.39
NEK3-201ENST00000550331 ADCK1Q86TW2 530 aa6.39□□□□□ -1.39
NEK3-201ENST00000550331 GLB1L2Q8IW92 636 aa6.39□□□□□ -1.39
NEK3-201ENST00000550331 OR5L1Q8NGL2 311 aa6.39□□□□□ -1.39
NEK3-201ENST00000550331 OR13G1Q8NGZ3 307 aa6.39□□□□□ -1.39
NEK3-201ENST00000550331 OR1F12Q8NHA8 337 aa6.39□□□□□ -1.39
NEK3-201ENST00000550331 PTP4A1Q93096 173 aa6.39□□□□□ -1.39
NEK3-201ENST00000550331 SLC25A28Q96A46 364 aa6.39□□□□□ -1.39
NEK3-201ENST00000550331 APOBEC3DQ96AK3 386 aaPredicted RBP6.39□□□□□ -1.39
NEK3-201ENST00000550331 UPRTQ96BW1 309 aa6.39□□□□□ -1.39
NEK3-201ENST00000550331 RASD2Q96D21 266 aa6.39□□□□□ -1.39
NEK3-201ENST00000550331 ZNF48Q96MX3 618 aaPredicted RBP6.39□□□□□ -1.39
NEK3-201ENST00000550331 SSBP3Q9BWW4 388 aaPredicted RBP6.39□□□□□ -1.39
NEK3-201ENST00000550331 MS4A7Q9GZW8 240 aaPredicted RBP6.39□□□□□ -1.39
NEK3-201ENST00000550331 NRIP3Q9NQ35 241 aa6.39□□□□□ -1.39
NEK3-201ENST00000550331 VSX1Q9NZR4 365 aaPredicted RBP6.39□□□□□ -1.39
NEK3-201ENST00000550331 ZNF281Q9Y2X9 895 aa6.39□□□□□ -1.39
NEK3-201ENST00000550331 STARD10Q9Y365 291 aa6.39□□□□□ -1.39
NEK3-201ENST00000550331 CAPN7Q9Y6W3 813 aa6.39□□□□□ -1.39
NEK3-201ENST00000550331 KMT2CQ8NEZ4 4911 aaKnown RBP6.39□□□□□ -1.39
NEK3-201ENST00000550331 RYR3Q15413 4870 aa6.38□□□□□ -1.39
NEK3-201ENST00000550331 A0A1B0GWJ7 208 aa6.38□□□□□ -1.39
NEK3-201ENST00000550331 A0A1W2PRQ8 180 aa6.38□□□□□ -1.39
NEK3-201ENST00000550331 CXCR6O00574 342 aa6.38□□□□□ -1.39
NEK3-201ENST00000550331 SLC16A7O60669 478 aa6.38□□□□□ -1.39
NEK3-201ENST00000550331 NDUFB2O95178 105 aa6.38□□□□□ -1.39
NEK3-201ENST00000550331 ZNF682O95780 498 aa6.38□□□□□ -1.39
NEK3-201ENST00000550331 PLATP00750 562 aa6.38□□□□□ -1.39
NEK3-201ENST00000550331 WNT2P09544 360 aa6.38□□□□□ -1.39
NEK3-201ENST00000550331 RPS2P15880 293 aaKnown RBP6.38□□□□□ -1.39
NEK3-201ENST00000550331 PAX2Q02962 417 aa6.38□□□□□ -1.39
NEK3-201ENST00000550331 LIPEQ05469 1076 aa6.38□□□□□ -1.39
NEK3-201ENST00000550331 DGCR6Q14129 220 aa6.38□□□□□ -1.39
NEK3-201ENST00000550331 CCDC92Q53HC0 331 aaPredicted RBP6.38□□□□□ -1.39
NEK3-201ENST00000550331 CGB2Q6NT52 195 aa6.38□□□□□ -1.39
NEK3-201ENST00000550331 C1orf94Q6P1W5 598 aa6.38□□□□□ -1.39
NEK3-201ENST00000550331 DNM1P34Q6PK57 102 aa6.38□□□□□ -1.39
NEK3-201ENST00000550331 TBPL2Q6SJ96 375 aa6.38□□□□□ -1.39
NEK3-201ENST00000550331 BTNL3Q6UXE8 466 aa6.38□□□□□ -1.39
NEK3-201ENST00000550331 FKBP9P1Q75LS8 142 aa6.38□□□□□ -1.39
NEK3-201ENST00000550331 CYP4Z1Q86W10 505 aa6.38□□□□□ -1.39
NEK3-201ENST00000550331 SLC15A3Q8IY34 581 aa6.38□□□□□ -1.39
NEK3-201ENST00000550331 BCL6BQ8N143 479 aaPredicted RBP6.38□□□□□ -1.39
NEK3-201ENST00000550331 PARP8Q8N3A8 854 aa6.38□□□□□ -1.39
NEK3-201ENST00000550331 ATG16L2Q8NAA4 619 aa6.38□□□□□ -1.39
NEK3-201ENST00000550331 GJC3Q8NFK1 279 aa6.38□□□□□ -1.39
NEK3-201ENST00000550331 OR8G5Q8NG78 346 aa6.38□□□□□ -1.39
NEK3-201ENST00000550331 OR52E2Q8NGJ4 325 aa6.38□□□□□ -1.39
NEK3-201ENST00000550331 RP9Q8TA86 221 aaKnown RBP6.38□□□□□ -1.39
NEK3-201ENST00000550331 SLC7A13Q8TCU3 470 aa6.38□□□□□ -1.39
NEK3-201ENST00000550331 SLC7A6Q92536 515 aa6.38□□□□□ -1.39
NEK3-201ENST00000550331 DACT3Q96B18 629 aaPredicted RBP6.38□□□□□ -1.39
NEK3-201ENST00000550331 RCN3Q96D15 328 aa6.38□□□□□ -1.39
NEK3-201ENST00000550331 PLEKHA8Q96JA3 519 aa6.38□□□□□ -1.39
NEK3-201ENST00000550331 ZNF582Q96NG8 517 aaPredicted RBP6.38□□□□□ -1.39
NEK3-201ENST00000550331 DUX5Q96PT3 197 aa6.38□□□□□ -1.39
NEK3-201ENST00000550331 COQ7Q99807 217 aa6.38□□□□□ -1.39
NEK3-201ENST00000550331 NUAK2Q9H093 628 aa6.38□□□□□ -1.39
NEK3-201ENST00000550331 HDHD2Q9H0R4 259 aa6.38□□□□□ -1.39
NEK3-201ENST00000550331 SYT4Q9H2B2 425 aa6.38□□□□□ -1.39
NEK3-201ENST00000550331 FGFR1OP2Q9NVK5 253 aa6.38□□□□□ -1.39
NEK3-201ENST00000550331 ARGLU1Q9NWB6 273 aaPredicted RBP6.38□□□□□ -1.39
NEK3-201ENST00000550331 CMTM6Q9NX76 183 aa6.38□□□□□ -1.39
NEK3-201ENST00000550331 MIOXQ9UGB7 285 aa6.38□□□□□ -1.39
NEK3-201ENST00000550331 SIGLEC7Q9Y286 467 aa6.38□□□□□ -1.39
NEK3-201ENST00000550331 COA3Q9Y2R0 106 aaPredicted RBP6.38□□□□□ -1.39
NEK3-201ENST00000550331 ENPP4Q9Y6X5 453 aa6.38□□□□□ -1.39
NEK3-201ENST00000550331 WNK1Q9H4A3 2382 aa6.38□□□□□ -1.39
NEK3-201ENST00000550331 IGHV2-70DA0A0C4DH43 119 aa6.37□□□□□ -1.39
NEK3-201ENST00000550331 LRRC30A6NM36 301 aa6.37□□□□□ -1.39
NEK3-201ENST00000550331 IQCF6A8MYZ5 107 aa6.37□□□□□ -1.39
NEK3-201ENST00000550331 NME4O00746 187 aa6.37□□□□□ -1.39
NEK3-201ENST00000550331 SOCS2O14508 198 aa6.37□□□□□ -1.39
NEK3-201ENST00000550331 NDUFAB1O14561 156 aa6.37□□□□□ -1.39
NEK3-201ENST00000550331 GSTA4O15217 222 aa6.37□□□□□ -1.39
NEK3-201ENST00000550331 RER1O15258 196 aa6.37□□□□□ -1.39
NEK3-201ENST00000550331 MLNRO43193 412 aa6.37□□□□□ -1.39
NEK3-201ENST00000550331 PTP4A3O75365 173 aa6.37□□□□□ -1.39
NEK3-201ENST00000550331 TXNDC12O95881 172 aa6.37□□□□□ -1.39
NEK3-201ENST00000550331 SERPINA1P01009 418 aa6.37□□□□□ -1.39
NEK3-201ENST00000550331 H1F0P07305 194 aaKnown RBP6.37□□□□□ -1.39
NEK3-201ENST00000550331 DBHP09172 617 aa6.37□□□□□ -1.39
NEK3-201ENST00000550331 IGHV4-38-2P0DP08 117 aa6.37□□□□□ -1.39
NEK3-201ENST00000550331 SELEP16581 610 aa6.37□□□□□ -1.39
NEK3-201ENST00000550331 CRABP1P29762 137 aa6.37□□□□□ -1.39
NEK3-201ENST00000550331 CD80P33681 288 aa6.37□□□□□ -1.39
NEK3-201ENST00000550331 RBMXP38159 391 aaKnown RBP6.37□□□□□ -1.39
NEK3-201ENST00000550331 OMPP47874 163 aa6.37□□□□□ -1.39
NEK3-201ENST00000550331 RPS6KA3P51812 740 aa6.37□□□□□ -1.39
NEK3-201ENST00000550331 BPIFB3P59826 476 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms