RNA–Protein interactions for RNA: ENST00000549205.1

ERBB3-208, Transcript of erb-b2 receptor tyrosine kinase 3, human

TSL 5

Gene ERBB3, Length 971 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB3-208	ENST00000549205	CDK5R1	Q15078	307 aa		10.64	□□□□□ -0.71
ERBB3-208	ENST00000549205	CDSN	Q15517	529 aa		10.64	□□□□□ -0.71
ERBB3-208	ENST00000549205	TST	Q16762	297 aa	Known RBP	10.64	□□□□□ -0.71
ERBB3-208	ENST00000549205	LIPK	Q5VXJ0	399 aa		10.64	□□□□□ -0.71
ERBB3-208	ENST00000549205	DMKN	Q6E0U4	476 aa	Predicted RBP	10.64	□□□□□ -0.71
ERBB3-208	ENST00000549205	RPL22L1	Q6P5R6	122 aa	Known RBP	10.64	□□□□□ -0.71
ERBB3-208	ENST00000549205	CATSPERD	Q86XM0	798 aa		10.64	□□□□□ -0.71
ERBB3-208	ENST00000549205	ZNF584	Q8IVC4	421 aa		10.64	□□□□□ -0.71
ERBB3-208	ENST00000549205	FAM169B	Q8N8A8	192 aa		10.64	□□□□□ -0.71
ERBB3-208	ENST00000549205	ZFP41	Q8N8Y5	198 aa		10.64	□□□□□ -0.71
ERBB3-208	ENST00000549205	OR13F1	Q8NGS4	319 aa		10.64	□□□□□ -0.71
ERBB3-208	ENST00000549205	OR2G2	Q8NGZ5	317 aa		10.64	□□□□□ -0.71
ERBB3-208	ENST00000549205	RPS4Y2	Q8TD47	263 aa		10.64	□□□□□ -0.71
ERBB3-208	ENST00000549205	HSD17B8	Q92506	261 aa		10.64	□□□□□ -0.71
ERBB3-208	ENST00000549205	SLC7A6	Q92536	515 aa		10.64	□□□□□ -0.71
ERBB3-208	ENST00000549205	UFD1	Q92890	307 aa		10.64	□□□□□ -0.71
ERBB3-208	ENST00000549205	RNASE6	Q93091	150 aa	Known RBP	10.64	□□□□□ -0.71
ERBB3-208	ENST00000549205	MOV10	Q9HCE1	1003 aa	Known RBP	10.64	□□□□□ -0.71
ERBB3-208	ENST00000549205	KCNJ16	Q9NPI9	418 aa		10.64	□□□□□ -0.71
ERBB3-208	ENST00000549205	SLC25A15	Q9Y619	301 aa		10.64	□□□□□ -0.71
ERBB3-208	ENST00000549205	SIRT4	Q9Y6E7	314 aa	Predicted RBP	10.64	□□□□□ -0.71
ERBB3-208	ENST00000549205	TACC2	O95359	2948 aa		10.63	□□□□□ -0.71
ERBB3-208	ENST00000549205	LOC100509620	A0A075B734	347 aa		10.63	□□□□□ -0.71
ERBB3-208	ENST00000549205	TMEM269	A0A1B0GVZ9	245 aa		10.63	□□□□□ -0.71
ERBB3-208	ENST00000549205	NKX2-6	A6NCS4	301 aa		10.63	□□□□□ -0.71
ERBB3-208	ENST00000549205	ACOD1	A6NK06	481 aa		10.63	□□□□□ -0.71
ERBB3-208	ENST00000549205		F5H5K5	113 aa		10.63	□□□□□ -0.71
ERBB3-208	ENST00000549205	LOC110117498-PIK3R3	F6TDL0	507 aa		10.63	□□□□□ -0.71
ERBB3-208	ENST00000549205		M0R135	149 aa		10.63	□□□□□ -0.71
ERBB3-208	ENST00000549205	AGFG2	O95081	481 aa		10.63	□□□□□ -0.71
ERBB3-208	ENST00000549205	IGKV3-15	P01624	115 aa		10.63	□□□□□ -0.71
ERBB3-208	ENST00000549205	DBH	P09172	617 aa		10.63	□□□□□ -0.71
ERBB3-208	ENST00000549205	ZNF14	P17017	642 aa	Predicted RBP	10.63	□□□□□ -0.71
ERBB3-208	ENST00000549205	CEL	P19835	753 aa		10.63	□□□□□ -0.71
ERBB3-208	ENST00000549205	PAX7	P23759	505 aa		10.63	□□□□□ -0.71
ERBB3-208	ENST00000549205	STOM	P27105	288 aa		10.63	□□□□□ -0.71
ERBB3-208	ENST00000549205	APEX1	P27695	318 aa	Known RBP	10.63	□□□□□ -0.71
ERBB3-208	ENST00000549205	TTK	P33981	857 aa		10.63	□□□□□ -0.71
ERBB3-208	ENST00000549205	TGFBR2	P37173	567 aa		10.63	□□□□□ -0.71
ERBB3-208	ENST00000549205	CX3CR1	P49238	355 aa		10.63	□□□□□ -0.71
ERBB3-208	ENST00000549205	RGS6	P49758	472 aa		10.63	□□□□□ -0.71
ERBB3-208	ENST00000549205	MMP16	P51512	607 aa		10.63	□□□□□ -0.71
ERBB3-208	ENST00000549205	PRKX	P51817	358 aa		10.63	□□□□□ -0.71
ERBB3-208	ENST00000549205	TPTE	P56180	551 aa		10.63	□□□□□ -0.71
ERBB3-208	ENST00000549205	NANOS3	P60323	173 aa	Known RBP	10.63	□□□□□ -0.71
ERBB3-208	ENST00000549205	MFGE8	Q08431	387 aa	Predicted RBP	10.63	□□□□□ -0.71
ERBB3-208	ENST00000549205	GPR50	Q13585	617 aa		10.63	□□□□□ -0.71
ERBB3-208	ENST00000549205	ALKBH1	Q13686	389 aa	Known RBP	10.63	□□□□□ -0.71
ERBB3-208	ENST00000549205	SSX1	Q16384	188 aa		10.63	□□□□□ -0.71
ERBB3-208	ENST00000549205	ZNF544	Q6NX49	715 aa		10.63	□□□□□ -0.71
ERBB3-208	ENST00000549205	XKRX	Q6PP77	449 aa		10.63	□□□□□ -0.71
ERBB3-208	ENST00000549205	ARL9	Q6T311	187 aa		10.63	□□□□□ -0.71
ERBB3-208	ENST00000549205	GPR141	Q7Z602	305 aa		10.63	□□□□□ -0.71
ERBB3-208	ENST00000549205	SATL1	Q86VE3	508 aa		10.63	□□□□□ -0.71
ERBB3-208	ENST00000549205	PRSS35	Q8N3Z0	413 aa		10.63	□□□□□ -0.71
ERBB3-208	ENST00000549205	ZNF808	Q8N4W9	903 aa	Predicted RBP	10.63	□□□□□ -0.71
ERBB3-208	ENST00000549205	ZNF283	Q8N7M2	679 aa		10.63	□□□□□ -0.71
ERBB3-208	ENST00000549205	ITLN2	Q8WWU7	325 aa	Predicted RBP	10.63	□□□□□ -0.71
ERBB3-208	ENST00000549205	MUCL1	Q96DR8	90 aa		10.63	□□□□□ -0.71
ERBB3-208	ENST00000549205	LRRC46	Q96FV0	321 aa		10.63	□□□□□ -0.71
ERBB3-208	ENST00000549205	ZNF799	Q96GE5	643 aa		10.63	□□□□□ -0.71
ERBB3-208	ENST00000549205	C4orf45	Q96LM5	186 aa		10.63	□□□□□ -0.71
ERBB3-208	ENST00000549205	DOK1	Q99704	481 aa		10.63	□□□□□ -0.71
ERBB3-208	ENST00000549205	MOB1A	Q9H8S9	216 aa		10.63	□□□□□ -0.71
ERBB3-208	ENST00000549205	NDUFB11	Q9NX14	153 aa		10.63	□□□□□ -0.71
ERBB3-208	ENST00000549205	FAM206A	Q9NX38	181 aa		10.63	□□□□□ -0.71
ERBB3-208	ENST00000549205	CRNN	Q9UBG3	495 aa	Predicted RBP	10.63	□□□□□ -0.71
ERBB3-208	ENST00000549205	RALY	Q9UKM9	306 aa	Known RBP	10.63	□□□□□ -0.71
ERBB3-208	ENST00000549205	CRYBG3	Q68DQ2	2970 aa		10.63	□□□□□ -0.71
ERBB3-208	ENST00000549205	DOPEY2	Q9Y3R5	2298 aa		10.62	□□□□□ -0.71
ERBB3-208	ENST00000549205	TRBV2	A0A0J9YWF9	115 aa		10.62	□□□□□ -0.71
ERBB3-208	ENST00000549205	PNMA8C	A0A1B0GUJ8	204 aa		10.62	□□□□□ -0.71
ERBB3-208	ENST00000549205	OR4C45	A6NMZ5	311 aa		10.62	□□□□□ -0.71
ERBB3-208	ENST00000549205	CCRL2	O00421	344 aa		10.62	□□□□□ -0.71
ERBB3-208	ENST00000549205	PLPP2	O43688	288 aa		10.62	□□□□□ -0.71
ERBB3-208	ENST00000549205	IGLV1-44	P01699	117 aa		10.62	□□□□□ -0.71
ERBB3-208	ENST00000549205	CD1A	P06126	327 aa		10.62	□□□□□ -0.71
ERBB3-208	ENST00000549205	ACSM4	P0C7M7	580 aa		10.62	□□□□□ -0.71
ERBB3-208	ENST00000549205	PPP3CB	P16298	524 aa		10.62	□□□□□ -0.71
ERBB3-208	ENST00000549205	CD53	P19397	219 aa		10.62	□□□□□ -0.71
ERBB3-208	ENST00000549205	APLNR	P35414	380 aa		10.62	□□□□□ -0.71
ERBB3-208	ENST00000549205	KIR3DL2	P43630	455 aa		10.62	□□□□□ -0.71
ERBB3-208	ENST00000549205	GDI2	P50395	445 aa	Known RBP	10.62	□□□□□ -0.71
ERBB3-208	ENST00000549205	IDH3G	P51553	393 aa	Predicted RBP	10.62	□□□□□ -0.71
ERBB3-208	ENST00000549205	CCR9	P51686	369 aa		10.62	□□□□□ -0.71
ERBB3-208	ENST00000549205	ZNF121	P58317	390 aa	Predicted RBP	10.62	□□□□□ -0.71
ERBB3-208	ENST00000549205	PPA1	Q15181	289 aa		10.62	□□□□□ -0.71
ERBB3-208	ENST00000549205	TAB1	Q15750	504 aa		10.62	□□□□□ -0.71
ERBB3-208	ENST00000549205	WDR38	Q5JTN6	314 aa		10.62	□□□□□ -0.71
ERBB3-208	ENST00000549205	BCL2L15	Q5TBC7	163 aa		10.62	□□□□□ -0.71
ERBB3-208	ENST00000549205	DRAM2	Q6UX65	266 aa		10.62	□□□□□ -0.71
ERBB3-208	ENST00000549205	SSX8	Q7RTT4	187 aa		10.62	□□□□□ -0.71
ERBB3-208	ENST00000549205	PHC2	Q8IXK0	858 aa		10.62	□□□□□ -0.71
ERBB3-208	ENST00000549205	SLC30A7	Q8NEW0	376 aa		10.62	□□□□□ -0.71
ERBB3-208	ENST00000549205	IL17RD	Q8NFM7	739 aa		10.62	□□□□□ -0.71
ERBB3-208	ENST00000549205	SMIM19	Q96E16	107 aa		10.62	□□□□□ -0.71
ERBB3-208	ENST00000549205	YIPF6	Q96EC8	236 aa		10.62	□□□□□ -0.71
ERBB3-208	ENST00000549205	MS4A3	Q96HJ5	214 aa		10.62	□□□□□ -0.71
ERBB3-208	ENST00000549205	POM121L2	Q96KW2	1035 aa		10.62	□□□□□ -0.71
ERBB3-208	ENST00000549205	DCLRE1C	Q96SD1	692 aa	Known RBP	10.62	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms