RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 ZNF585BQ52M93 769 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 ZNF774Q6NX45 483 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 ZNF544Q6NX49 715 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 FAM199XQ6PEV8 388 aaPredicted RBP4.24□□□□□ -1.73
SCAF11-212ENST00000549162 VTCN1Q7Z7D3 282 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 SPATA24Q86W54 205 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 Q8IYB0 196 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 CDK20Q8IZL9 346 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 GDPD1Q8N9F7 314 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 RGP1Q92546 391 aaPredicted RBP4.24□□□□□ -1.73
SCAF11-212ENST00000549162 IL22RA2Q969J5 263 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 RASD2Q96D21 266 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 ZNF486Q96H40 463 aaPredicted RBP4.24□□□□□ -1.73
SCAF11-212ENST00000549162 GPR35Q9HC97 309 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 C20orf141Q9NUB4 165 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 LIPGQ9Y5X9 500 aa4.24□□□□□ -1.73
SCAF11-212ENST00000549162 SDK1Q7Z5N4 2213 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 A0A1B0GUH1 482 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 OR2M5A3KFT3 312 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 C12orf71A8MTZ7 269 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 J3QLW9 94 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 PDCD5O14737 125 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 RNF13O43567 381 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 SMPD2O60906 423 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 NME6O75414 186 aaPredicted RBP4.23□□□□□ -1.73
SCAF11-212ENST00000549162 CYB5AP00167 134 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 FAM87AP0C7U9 286 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 ZNF19P17023 458 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 IDH3GP51553 393 aaPredicted RBP4.23□□□□□ -1.73
SCAF11-212ENST00000549162 RGS8P57771 180 aaPredicted RBP4.23□□□□□ -1.73
SCAF11-212ENST00000549162 GK2Q14410 553 aaPredicted RBP4.23□□□□□ -1.73
SCAF11-212ENST00000549162 MPPED2Q15777 294 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 VAX1Q5SQQ9 334 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 HLA-DQA1Q5Y7H0 255 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 C16orf87Q6PH81 154 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 C22orf34Q6ZV56 151 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 LANCL3Q6ZV70 420 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 DOK3Q7L591 496 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 TUSC5Q8IXB3 177 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 KLHL36Q8N4N3 616 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 ZNF283Q8N7M2 679 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 KBTBD8Q8NFY9 601 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 CHPT1Q8WUD6 406 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.23□□□□□ -1.73
SCAF11-212ENST00000549162 CHST5Q9GZS9 411 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 APMAPQ9HDC9 416 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 KLHL1Q9NR64 748 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 SCN3BQ9NY72 215 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 ADA2Q9NZK5 511 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 MRM2Q9UI43 246 aaKnown RBP4.23□□□□□ -1.73
SCAF11-212ENST00000549162 PMF1-BGLAPU3KQ54 211 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 V9GYH0 126 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 ZNF878C9JN71 531 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 H3BMQ9 156 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 OR10H2O60403 315 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 GRPP07492 148 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 CCL3P10147 92 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 BMP7P18075 431 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 PAICSP22234 425 aaKnown RBP4.23□□□□□ -1.73
SCAF11-212ENST00000549162 CDKN2AP42771 156 aaKnown RBP4.23□□□□□ -1.73
SCAF11-212ENST00000549162 CBX5P45973 191 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 ASCL1P50553 236 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 PLA2G16P53816 162 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 TLE4Q04727 773 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 MYBPHQ13203 477 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 TNK1Q13470 666 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 ZNF146Q15072 292 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 ZNF829Q3KNS6 432 aaPredicted RBP4.23□□□□□ -1.73
SCAF11-212ENST00000549162 ACTBL2Q562R1 376 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 CXXC5Q7LFL8 322 aaKnown RBP4.23□□□□□ -1.73
SCAF11-212ENST00000549162 LY6G5BQ8NDX9 201 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 OR5D16Q8NGK9 328 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 PHOSPHO1Q8TCT1 267 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 BORCS5Q969J3 196 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 SLAMF9Q96A28 289 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 MROQ9BYG7 248 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 OR2J1Q9GZK6 312 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 ZNF701Q9NV72 531 aaPredicted RBP4.23□□□□□ -1.73
SCAF11-212ENST00000549162 SPATA2Q9UM82 520 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 U3KQE9 123 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 NUMA1Q14980 2115 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 LOC105371242A0A075B767 164 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 A0A096LNT2 108 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 PINLYPA6NC86 204 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 FNDC10F2Z333 226 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 LOC110117498-PIK3R3F6TDL0 507 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.23□□□□□ -1.73
SCAF11-212ENST00000549162 SLC43A1O75387 559 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 PSKH1P11801 424 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 ITPKBP27987 946 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 CTXN1P60606 82 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 RAB8AP61006 207 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 KRR1Q13601 381 aaKnown RBP4.23□□□□□ -1.73
SCAF11-212ENST00000549162 POU2AF1Q16633 256 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 MPV17LQ2QL34 196 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 SPIN3Q5JUX0 258 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 TMEM244Q5VVB8 128 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 ANKRD34AQ69YU3 496 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 PTCHD4Q6ZW05 846 aa4.23□□□□□ -1.73
SCAF11-212ENST00000549162 LUZP2Q86TE4 346 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms