RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 AUP1Q9Y679 476 aa14.6□□□□□ -0.07
CHMP1A-205ENST00000548650 IQCF6A8MYZ5 107 aa14.59□□□□□ -0.07
CHMP1A-205ENST00000548650 H0YL77 283 aa14.59□□□□□ -0.07
CHMP1A-205ENST00000548650 IFNL4K9M1U5 179 aa14.59□□□□□ -0.07
CHMP1A-205ENST00000548650 GADD45GO95257 159 aa14.59□□□□□ -0.07
CHMP1A-205ENST00000548650 HIST1H1CP16403 213 aaKnown RBP14.59□□□□□ -0.07
CHMP1A-205ENST00000548650 FPR2P25090 351 aa14.59□□□□□ -0.07
CHMP1A-205ENST00000548650 RFX4Q33E94 735 aa14.59□□□□□ -0.07
CHMP1A-205ENST00000548650 ESCO2Q56NI9 601 aa14.59□□□□□ -0.07
CHMP1A-205ENST00000548650 SLC18B1Q6NT16 456 aa14.59□□□□□ -0.07
CHMP1A-205ENST00000548650 SLC27A4Q6P1M0 643 aa14.59□□□□□ -0.07
CHMP1A-205ENST00000548650 DOK3Q7L591 496 aa14.59□□□□□ -0.07
CHMP1A-205ENST00000548650 JAZF1Q86VZ6 243 aa14.59□□□□□ -0.07
CHMP1A-205ENST00000548650 LINC00346Q8IVM7 164 aa14.59□□□□□ -0.07
CHMP1A-205ENST00000548650 SIGLECL1Q8N7X8 197 aa14.59□□□□□ -0.07
CHMP1A-205ENST00000548650 C3orf56Q8N813 242 aa14.59□□□□□ -0.07
CHMP1A-205ENST00000548650 BHLHE23Q8NDY6 225 aa14.59□□□□□ -0.07
CHMP1A-205ENST00000548650 OR13G1Q8NGZ3 307 aa14.59□□□□□ -0.07
CHMP1A-205ENST00000548650 OR4K13Q8NH42 304 aa14.59□□□□□ -0.07
CHMP1A-205ENST00000548650 ZMYND19Q96E35 227 aaPredicted RBP14.59□□□□□ -0.07
CHMP1A-205ENST00000548650 PYURFQ96I23 114 aa14.59□□□□□ -0.07
CHMP1A-205ENST00000548650 ZNF582Q96NG8 517 aaPredicted RBP14.59□□□□□ -0.07
CHMP1A-205ENST00000548650 C1QTNF5Q9BXJ0 243 aa14.59□□□□□ -0.07
CHMP1A-205ENST00000548650 WDR76Q9H967 626 aa14.59□□□□□ -0.07
CHMP1A-205ENST00000548650 NTN4Q9HB63 628 aa14.59□□□□□ -0.07
CHMP1A-205ENST00000548650 RPRD1BQ9NQG5 326 aaKnown RBP14.59□□□□□ -0.07
CHMP1A-205ENST00000548650 ZNF69Q9UC07 566 aa14.59□□□□□ -0.07
CHMP1A-205ENST00000548650 OR5V1Q9UGF6 321 aa14.59□□□□□ -0.07
CHMP1A-205ENST00000548650 NUP50Q9UKX7 468 aa14.59□□□□□ -0.07
CHMP1A-205ENST00000548650 F5H5P2 479 aa14.58□□□□□ -0.08
CHMP1A-205ENST00000548650 GMNNO75496 209 aa14.58□□□□□ -0.08
CHMP1A-205ENST00000548650 CYB5R3P00387 301 aaPredicted RBP14.58□□□□□ -0.08
CHMP1A-205ENST00000548650 RENP00797 406 aa14.58□□□□□ -0.08
CHMP1A-205ENST00000548650 ACSM4P0C7M7 580 aa14.58□□□□□ -0.08
CHMP1A-205ENST00000548650 HSD17B1P14061 328 aa14.58□□□□□ -0.08
CHMP1A-205ENST00000548650 GSSP48637 474 aa14.58□□□□□ -0.08
CHMP1A-205ENST00000548650 SRP9P49458 86 aaKnown RBP14.58□□□□□ -0.08
CHMP1A-205ENST00000548650 PRSS12P56730 875 aa14.58□□□□□ -0.08
CHMP1A-205ENST00000548650 SMIM11AP58511 58 aa14.58□□□□□ -0.08
CHMP1A-205ENST00000548650 PAX2Q02962 417 aa14.58□□□□□ -0.08
CHMP1A-205ENST00000548650 AWAT1Q58HT5 328 aa14.58□□□□□ -0.08
CHMP1A-205ENST00000548650 ZNF620Q6ZNG0 422 aa14.58□□□□□ -0.08
CHMP1A-205ENST00000548650 ZBTB46Q86UZ6 589 aa14.58□□□□□ -0.08
CHMP1A-205ENST00000548650 SDR9C7Q8NEX9 313 aa14.58□□□□□ -0.08
CHMP1A-205ENST00000548650 C1orf147Q96MC9 270 aaPredicted RBP14.58□□□□□ -0.08
CHMP1A-205ENST00000548650 IFT27Q9BW83 186 aa14.58□□□□□ -0.08
CHMP1A-205ENST00000548650 FN3KQ9H479 309 aa14.58□□□□□ -0.08
CHMP1A-205ENST00000548650 PNRC2Q9NPJ4 139 aaKnown RBP14.58□□□□□ -0.08
CHMP1A-205ENST00000548650 IGHV3-64DA0A0J9YX35 117 aa14.57□□□□□ -0.08
CHMP1A-205ENST00000548650 OR6C68A6NDL8 312 aa14.57□□□□□ -0.08
CHMP1A-205ENST00000548650 DNAJC9-AS1A6NH13 148 aa14.57□□□□□ -0.08
CHMP1A-205ENST00000548650 ARPC2O15144 300 aa14.57□□□□□ -0.08
CHMP1A-205ENST00000548650 OR10H3O60404 316 aa14.57□□□□□ -0.08
CHMP1A-205ENST00000548650 SNX3O60493 162 aa14.57□□□□□ -0.08
CHMP1A-205ENST00000548650 ZNF205O95201 554 aa14.57□□□□□ -0.08
CHMP1A-205ENST00000548650 WNT2P09544 360 aa14.57□□□□□ -0.08
CHMP1A-205ENST00000548650 RPS2P15880 293 aaKnown RBP14.57□□□□□ -0.08
CHMP1A-205ENST00000548650 SELEP16581 610 aa14.57□□□□□ -0.08
CHMP1A-205ENST00000548650 GGT2P36268 569 aa14.57□□□□□ -0.08
CHMP1A-205ENST00000548650 ZNF181Q2M3W8 571 aa14.57□□□□□ -0.08
CHMP1A-205ENST00000548650 MOGAT3Q86VF5 341 aa14.57□□□□□ -0.08
CHMP1A-205ENST00000548650 DACT3Q96B18 629 aaPredicted RBP14.57□□□□□ -0.08
CHMP1A-205ENST00000548650 ATF6BQ99941 703 aa14.57□□□□□ -0.08
CHMP1A-205ENST00000548650 MRI1Q9BV20 369 aa14.57□□□□□ -0.08
CHMP1A-205ENST00000548650 SSBP3Q9BWW4 388 aaPredicted RBP14.57□□□□□ -0.08
CHMP1A-205ENST00000548650 FAM107BQ9H098 131 aa14.57□□□□□ -0.08
CHMP1A-205ENST00000548650 TMEM165Q9HC07 324 aa14.57□□□□□ -0.08
CHMP1A-205ENST00000548650 SRA1Q9HD15 236 aaKnown RBP14.57□□□□□ -0.08
CHMP1A-205ENST00000548650 DDX28Q9NUL7 540 aaKnown RBP14.57□□□□□ -0.08
CHMP1A-205ENST00000548650 CYB5R1Q9UHQ9 305 aa14.57□□□□□ -0.08
CHMP1A-205ENST00000548650 FSTL3O95633 263 aa14.56□□□□□ -0.08
CHMP1A-205ENST00000548650 FABP3P05413 133 aa14.56□□□□□ -0.08
CHMP1A-205ENST00000548650 RRM2P31350 389 aa14.56□□□□□ -0.08
CHMP1A-205ENST00000548650 CD80P33681 288 aa14.56□□□□□ -0.08
CHMP1A-205ENST00000548650 GK2Q14410 553 aaPredicted RBP14.56□□□□□ -0.08
CHMP1A-205ENST00000548650 ZNF404Q494X3 552 aa14.56□□□□□ -0.08
CHMP1A-205ENST00000548650 PGBD2Q6P3X8 592 aa14.56□□□□□ -0.08
CHMP1A-205ENST00000548650 KLBQ86Z14 1044 aa14.56□□□□□ -0.08
CHMP1A-205ENST00000548650 PGAM4Q8N0Y7 254 aa14.56□□□□□ -0.08
CHMP1A-205ENST00000548650 BCL6BQ8N143 479 aaPredicted RBP14.56□□□□□ -0.08
CHMP1A-205ENST00000548650 NSMCE2Q96MF7 247 aa14.56□□□□□ -0.08
CHMP1A-205ENST00000548650 ZNF48Q96MX3 618 aaPredicted RBP14.56□□□□□ -0.08
CHMP1A-205ENST00000548650 PITX2Q99697 317 aa14.56□□□□□ -0.08
CHMP1A-205ENST00000548650 MRPL22Q9NWU5 206 aaKnown RBP14.56□□□□□ -0.08
CHMP1A-205ENST00000548650 CD300AQ9UGN4 299 aa14.56□□□□□ -0.08
CHMP1A-205ENST00000548650 F5H5K5 113 aa14.55□□□□□ -0.08
CHMP1A-205ENST00000548650 HLA-DPB1P04440 258 aa14.55□□□□□ -0.08
CHMP1A-205ENST00000548650 EGR1P18146 543 aa14.55□□□□□ -0.08
CHMP1A-205ENST00000548650 CPT2P23786 658 aa14.55□□□□□ -0.08
CHMP1A-205ENST00000548650 NOS3P29474 1203 aa14.55□□□□□ -0.08
CHMP1A-205ENST00000548650 MSX2P35548 267 aaPredicted RBP14.55□□□□□ -0.08
CHMP1A-205ENST00000548650 PMELP40967 661 aa14.55□□□□□ -0.08
CHMP1A-205ENST00000548650 GATA4P43694 442 aa14.55□□□□□ -0.08
CHMP1A-205ENST00000548650 PAX8Q06710 450 aa14.55□□□□□ -0.08
CHMP1A-205ENST00000548650 TRAP1Q12931 704 aaKnown RBP14.55□□□□□ -0.08
CHMP1A-205ENST00000548650 ECH1Q13011 328 aa14.55□□□□□ -0.08
CHMP1A-205ENST00000548650 SLC36A3Q495N2 470 aa14.55□□□□□ -0.08
CHMP1A-205ENST00000548650 SAMD4BQ5PRF9 694 aaKnown RBP14.55□□□□□ -0.08
CHMP1A-205ENST00000548650 FAM201AQ5SY85 155 aa14.55□□□□□ -0.08
CHMP1A-205ENST00000548650 RBMS3Q6XE24 437 aaKnown RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms