RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 EGLN3Q9H6Z9 239 aa11.82□□□□□ -0.52
PTCH1-217ENST00000548420 CDH20Q9HBT6 801 aa11.82□□□□□ -0.52
PTCH1-217ENST00000548420 EMC7Q9NPA0 242 aa11.82□□□□□ -0.52
PTCH1-217ENST00000548420 B9D1Q9UPM9 204 aa11.82□□□□□ -0.52
PTCH1-217ENST00000548420 U3KQV3 271 aa11.82□□□□□ -0.52
PTCH1-217ENST00000548420 IGLV3-9A0A075B6K5 115 aa11.81□□□□□ -0.52
PTCH1-217ENST00000548420 A0A1B0GUS0 222 aa11.81□□□□□ -0.52
PTCH1-217ENST00000548420 OR6C68A6NDL8 312 aa11.81□□□□□ -0.52
PTCH1-217ENST00000548420 J3QLI3 93 aa11.81□□□□□ -0.52
PTCH1-217ENST00000548420 WNT5AP41221 380 aa11.81□□□□□ -0.52
PTCH1-217ENST00000548420 RASSF2P50749 326 aa11.81□□□□□ -0.52
PTCH1-217ENST00000548420 HIST1H3AP68431 136 aa11.81□□□□□ -0.52
PTCH1-217ENST00000548420 COX10Q12887 443 aa11.81□□□□□ -0.52
PTCH1-217ENST00000548420 HIST2H3PS2Q5TEC6 136 aa11.81□□□□□ -0.52
PTCH1-217ENST00000548420 HIST2H3AQ71DI3 136 aa11.81□□□□□ -0.52
PTCH1-217ENST00000548420 TMEM179BQ7Z7N9 219 aa11.81□□□□□ -0.52
PTCH1-217ENST00000548420 LNX2Q8N448 690 aa11.81□□□□□ -0.52
PTCH1-217ENST00000548420 AQP11Q8NBQ7 271 aa11.81□□□□□ -0.52
PTCH1-217ENST00000548420 OR8D4Q8NGM9 314 aa11.81□□□□□ -0.52
PTCH1-217ENST00000548420 OR4K13Q8NH42 304 aa11.81□□□□□ -0.52
PTCH1-217ENST00000548420 GTF3AQ92664 365 aaKnown RBP11.81□□□□□ -0.52
PTCH1-217ENST00000548420 SLCO4A1Q96BD0 722 aa11.81□□□□□ -0.52
PTCH1-217ENST00000548420 MMADHCQ9H3L0 296 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-217ENST00000548420 C7orf69Q9H7B7 122 aa11.81□□□□□ -0.52
PTCH1-217ENST00000548420 DEAF1O75398 565 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-217ENST00000548420 FAM157BP0CG42 384 aa11.8□□□□□ -0.52
PTCH1-217ENST00000548420 GSTM3P21266 225 aa11.8□□□□□ -0.52
PTCH1-217ENST00000548420 GDI2P50395 445 aaKnown RBP11.8□□□□□ -0.52
PTCH1-217ENST00000548420 AQP6Q13520 282 aa11.8□□□□□ -0.52
PTCH1-217ENST00000548420 HLXQ14774 488 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-217ENST00000548420 KLF17Q5JT82 389 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-217ENST00000548420 DCAF12L2Q5VW00 463 aa11.8□□□□□ -0.52
PTCH1-217ENST00000548420 RGS7BPQ6MZT1 257 aaPredicted RBP11.8□□□□□ -0.52
PTCH1-217ENST00000548420 ZNF774Q6NX45 483 aa11.8□□□□□ -0.52
PTCH1-217ENST00000548420 C16orf87Q6PH81 154 aa11.8□□□□□ -0.52
PTCH1-217ENST00000548420 DNM1P34Q6PK57 102 aa11.8□□□□□ -0.52
PTCH1-217ENST00000548420 SPATA24Q86W54 205 aa11.8□□□□□ -0.52
PTCH1-217ENST00000548420 C1orf174Q8IYL3 243 aa11.8□□□□□ -0.52
PTCH1-217ENST00000548420 ZNF101Q8IZC7 436 aa11.8□□□□□ -0.52
PTCH1-217ENST00000548420 OR10G2Q8NGC3 310 aa11.8□□□□□ -0.52
PTCH1-217ENST00000548420 GIPC3Q8TF64 312 aa11.8□□□□□ -0.52
PTCH1-217ENST00000548420 C11orf40Q8WZ69 217 aa11.8□□□□□ -0.52
PTCH1-217ENST00000548420 YIPF5Q969M3 257 aa11.8□□□□□ -0.52
PTCH1-217ENST00000548420 FEVQ99581 238 aa11.8□□□□□ -0.52
PTCH1-217ENST00000548420 NIPSNAP1Q9BPW8 284 aa11.8□□□□□ -0.52
PTCH1-217ENST00000548420 TPK1Q9H3S4 243 aa11.8□□□□□ -0.52
PTCH1-217ENST00000548420 MS4A5Q9H3V2 200 aa11.8□□□□□ -0.52
PTCH1-217ENST00000548420 BEX1Q9HBH7 125 aa11.8□□□□□ -0.52
PTCH1-217ENST00000548420 SRA1Q9HD15 236 aaKnown RBP11.8□□□□□ -0.52
PTCH1-217ENST00000548420 MYEF2Q9P2K5 600 aaKnown RBP11.8□□□□□ -0.52
PTCH1-217ENST00000548420 REV1Q9UBZ9 1251 aa11.8□□□□□ -0.52
PTCH1-217ENST00000548420 C5orf49A4QMS7 147 aa11.79□□□□□ -0.52
PTCH1-217ENST00000548420 FKBP6O75344 327 aa11.79□□□□□ -0.52
PTCH1-217ENST00000548420 CLPTM1O96005 669 aa11.79□□□□□ -0.52
PTCH1-217ENST00000548420 RENP00797 406 aa11.79□□□□□ -0.52
PTCH1-217ENST00000548420 ADRA2AP08913 450 aa11.79□□□□□ -0.52
PTCH1-217ENST00000548420 NOS3P29474 1203 aa11.79□□□□□ -0.52
PTCH1-217ENST00000548420 RAG2P55895 527 aa11.79□□□□□ -0.52
PTCH1-217ENST00000548420 ERVS71-1P61550 626 aa11.79□□□□□ -0.52
PTCH1-217ENST00000548420 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.79□□□□□ -0.52
PTCH1-217ENST00000548420 SCRN3Q0VDG4 424 aa11.79□□□□□ -0.52
PTCH1-217ENST00000548420 CCDC92Q53HC0 331 aaPredicted RBP11.79□□□□□ -0.52
PTCH1-217ENST00000548420 CLEC12AQ5QGZ9 265 aa11.79□□□□□ -0.52
PTCH1-217ENST00000548420 SLC35F1Q5T1Q4 408 aa11.79□□□□□ -0.52
PTCH1-217ENST00000548420 ACSM5Q6NUN0 579 aa11.79□□□□□ -0.52
PTCH1-217ENST00000548420 VASH1Q7L8A9 365 aaPredicted RBP11.79□□□□□ -0.52
PTCH1-217ENST00000548420 JAZF1Q86VZ6 243 aa11.79□□□□□ -0.52
PTCH1-217ENST00000548420 SLC26A10Q8NG04 563 aa11.79□□□□□ -0.52
PTCH1-217ENST00000548420 OR52L1Q8NGH7 329 aa11.79□□□□□ -0.52
PTCH1-217ENST00000548420 OR52E2Q8NGJ4 325 aa11.79□□□□□ -0.52
PTCH1-217ENST00000548420 SYNPRQ8TBG9 265 aa11.79□□□□□ -0.52
PTCH1-217ENST00000548420 MARS2Q96GW9 593 aaKnown RBP11.79□□□□□ -0.52
PTCH1-217ENST00000548420 SYT3Q9BQG1 590 aa11.79□□□□□ -0.52
PTCH1-217ENST00000548420 YY1AP1Q9H869 796 aa11.79□□□□□ -0.52
PTCH1-217ENST00000548420 ATPIF1Q9UII2 106 aa11.79□□□□□ -0.52
PTCH1-217ENST00000548420 NDRG4Q9ULP0 352 aaKnown RBP11.79□□□□□ -0.52
PTCH1-217ENST00000548420 FZR1Q9UM11 496 aa11.79□□□□□ -0.52
PTCH1-217ENST00000548420 BAIAP2Q9UQB8 552 aa11.79□□□□□ -0.52
PTCH1-217ENST00000548420 LHFPL6Q9Y693 200 aa11.79□□□□□ -0.52
PTCH1-217ENST00000548420 CLPSL1A2RUU4 121 aa11.78□□□□□ -0.52
PTCH1-217ENST00000548420 OR6C6A6NF89 314 aa11.78□□□□□ -0.52
PTCH1-217ENST00000548420 M0R233 179 aa11.78□□□□□ -0.52
PTCH1-217ENST00000548420 SGCEO43556 437 aa11.78□□□□□ -0.52
PTCH1-217ENST00000548420 GPANK1O95872 356 aa11.78□□□□□ -0.52
PTCH1-217ENST00000548420 IGHV3-13P01766 116 aa11.78□□□□□ -0.52
PTCH1-217ENST00000548420 HPXP02790 462 aa11.78□□□□□ -0.52
PTCH1-217ENST00000548420 CBX1P83916 185 aa11.78□□□□□ -0.52
PTCH1-217ENST00000548420 GLO1Q04760 184 aa11.78□□□□□ -0.52
PTCH1-217ENST00000548420 DBPQ10586 325 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-217ENST00000548420 MBNL2Q5VZF2 373 aaKnown RBP11.78□□□□□ -0.52
PTCH1-217ENST00000548420 OTPQ5XKR4 325 aa11.78□□□□□ -0.52
PTCH1-217ENST00000548420 SDR9C7Q8NEX9 313 aa11.78□□□□□ -0.52
PTCH1-217ENST00000548420 OR1J1Q8NGS3 322 aa11.78□□□□□ -0.52
PTCH1-217ENST00000548420 OR4Q3Q8NH05 313 aa11.78□□□□□ -0.52
PTCH1-217ENST00000548420 UTP4Q969X6 686 aaKnown RBP11.78□□□□□ -0.52
PTCH1-217ENST00000548420 DUS3LQ96G46 650 aaKnown RBP11.78□□□□□ -0.52
PTCH1-217ENST00000548420 C4orf45Q96LM5 186 aa11.78□□□□□ -0.52
PTCH1-217ENST00000548420 TSSK6Q9BXA6 273 aa11.78□□□□□ -0.52
PTCH1-217ENST00000548420 NMNAT2Q9BZQ4 307 aa11.78□□□□□ -0.52
PTCH1-217ENST00000548420 RERGLQ9H628 205 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms