RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 THBS2P35442 1172 aa11.83□□□□□ -0.52
PTCH1-215ENST00000547672 ARR3P36575 388 aa11.83□□□□□ -0.52
PTCH1-215ENST00000547672 GNALP38405 381 aa11.83□□□□□ -0.52
PTCH1-215ENST00000547672 ART1P52961 327 aa11.83□□□□□ -0.52
PTCH1-215ENST00000547672 OR10A3P58181 314 aa11.83□□□□□ -0.52
PTCH1-215ENST00000547672 ZNF121P58317 390 aaPredicted RBP11.83□□□□□ -0.52
PTCH1-215ENST00000547672 TGFBR3Q03167 851 aa11.83□□□□□ -0.52
PTCH1-215ENST00000547672 ODF4Q2M2E3 257 aa11.83□□□□□ -0.52
PTCH1-215ENST00000547672 TRIQKQ629K1 86 aa11.83□□□□□ -0.52
PTCH1-215ENST00000547672 MZT2BQ6NZ67 158 aa11.83□□□□□ -0.52
PTCH1-215ENST00000547672 ZNF813Q6ZN06 617 aa11.83□□□□□ -0.52
PTCH1-215ENST00000547672 DCDC5Q6ZRR9 648 aa11.83□□□□□ -0.52
PTCH1-215ENST00000547672 Q6ZS92 163 aa11.83□□□□□ -0.52
PTCH1-215ENST00000547672 FGD2Q7Z6J4 655 aa11.83□□□□□ -0.52
PTCH1-215ENST00000547672 LRRTM1Q86UE6 522 aa11.83□□□□□ -0.52
PTCH1-215ENST00000547672 TUSC5Q8IXB3 177 aa11.83□□□□□ -0.52
PTCH1-215ENST00000547672 RDH10Q8IZV5 341 aa11.83□□□□□ -0.52
PTCH1-215ENST00000547672 LRRC18Q8N456 261 aa11.83□□□□□ -0.52
PTCH1-215ENST00000547672 POC5Q8NA72 575 aa11.83□□□□□ -0.52
PTCH1-215ENST00000547672 OR10S1Q8NGN2 331 aa11.83□□□□□ -0.52
PTCH1-215ENST00000547672 PHF21AQ96BD5 680 aa11.83□□□□□ -0.52
PTCH1-215ENST00000547672 PPP1R14BQ96C90 147 aa11.83□□□□□ -0.52
PTCH1-215ENST00000547672 SCNM1Q9BWG6 230 aa11.83□□□□□ -0.52
PTCH1-215ENST00000547672 RGCCQ9H4X1 137 aa11.83□□□□□ -0.52
PTCH1-215ENST00000547672 PPP1R3EQ9H7J1 279 aa11.83□□□□□ -0.52
PTCH1-215ENST00000547672 PNRC2Q9NPJ4 139 aaKnown RBP11.83□□□□□ -0.52
PTCH1-215ENST00000547672 SLC17A5Q9NRA2 495 aa11.83□□□□□ -0.52
PTCH1-215ENST00000547672 EXTL2Q9UBQ6 330 aa11.83□□□□□ -0.52
PTCH1-215ENST00000547672 FBXL3Q9UKT7 428 aa11.83□□□□□ -0.52
PTCH1-215ENST00000547672 DHRS7CA6NNS2 312 aa11.82□□□□□ -0.52
PTCH1-215ENST00000547672 P2RY10O00398 339 aa11.82□□□□□ -0.52
PTCH1-215ENST00000547672 DVL2O14641 736 aa11.82□□□□□ -0.52
PTCH1-215ENST00000547672 TTRP02766 147 aa11.82□□□□□ -0.52
PTCH1-215ENST00000547672 HOXD4P09016 255 aaPredicted RBP11.82□□□□□ -0.52
PTCH1-215ENST00000547672 ACSM4P0C7M7 580 aa11.82□□□□□ -0.52
PTCH1-215ENST00000547672 COX5BP10606 129 aa11.82□□□□□ -0.52
PTCH1-215ENST00000547672 CD37P11049 281 aa11.82□□□□□ -0.52
PTCH1-215ENST00000547672 SLC2A2P11168 524 aaPredicted RBP11.82□□□□□ -0.52
PTCH1-215ENST00000547672 ATF1P18846 271 aa11.82□□□□□ -0.52
PTCH1-215ENST00000547672 ELK1P19419 428 aa11.82□□□□□ -0.52
PTCH1-215ENST00000547672 OTX1P32242 354 aaPredicted RBP11.82□□□□□ -0.52
PTCH1-215ENST00000547672 PTGER4P35408 488 aa11.82□□□□□ -0.52
PTCH1-215ENST00000547672 PRKXP51817 358 aa11.82□□□□□ -0.52
PTCH1-215ENST00000547672 MRPS10P82664 201 aaKnown RBP11.82□□□□□ -0.52
PTCH1-215ENST00000547672 GALK2Q01415 458 aa11.82□□□□□ -0.52
PTCH1-215ENST00000547672 OXA1LQ15070 435 aa11.82□□□□□ -0.52
PTCH1-215ENST00000547672 RAB11BQ15907 218 aa11.82□□□□□ -0.52
PTCH1-215ENST00000547672 SLC25A35Q3KQZ1 300 aa11.82□□□□□ -0.52
PTCH1-215ENST00000547672 KRTCAP3Q53RY4 240 aa11.82□□□□□ -0.52
PTCH1-215ENST00000547672 RNFT1Q5M7Z0 435 aa11.82□□□□□ -0.52
PTCH1-215ENST00000547672 STEAP3Q658P3 488 aa11.82□□□□□ -0.52
PTCH1-215ENST00000547672 TMEM53Q6P2H8 277 aa11.82□□□□□ -0.52
PTCH1-215ENST00000547672 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.82□□□□□ -0.52
PTCH1-215ENST00000547672 NR2C2APQ86WQ0 139 aa11.82□□□□□ -0.52
PTCH1-215ENST00000547672 COMMD2Q86X83 199 aa11.82□□□□□ -0.52
PTCH1-215ENST00000547672 UBE2J2Q8N2K1 259 aa11.82□□□□□ -0.52
PTCH1-215ENST00000547672 CENPSQ8N2Z9 138 aa11.82□□□□□ -0.52
PTCH1-215ENST00000547672 Q8N402 240 aa11.82□□□□□ -0.52
PTCH1-215ENST00000547672 OR1F12Q8NHA8 337 aa11.82□□□□□ -0.52
PTCH1-215ENST00000547672 NANOS1Q8WY41 292 aaKnown RBP11.82□□□□□ -0.52
PTCH1-215ENST00000547672 WNT2BQ93097 391 aa11.82□□□□□ -0.52
PTCH1-215ENST00000547672 SORCS2Q96PQ0 1159 aa11.82□□□□□ -0.52
PTCH1-215ENST00000547672 ABCG5Q9H222 651 aa11.82□□□□□ -0.52
PTCH1-215ENST00000547672 RNF121Q9H920 327 aa11.82□□□□□ -0.52
PTCH1-215ENST00000547672 TMEM138Q9NPI0 162 aa11.82□□□□□ -0.52
PTCH1-215ENST00000547672 SLC5A6Q9Y289 635 aa11.82□□□□□ -0.52
PTCH1-215ENST00000547672 LOC390937A0A1W2PQ73 354 aa11.81□□□□□ -0.52
PTCH1-215ENST00000547672 F5H5K5 113 aa11.81□□□□□ -0.52
PTCH1-215ENST00000547672 M0R135 149 aa11.81□□□□□ -0.52
PTCH1-215ENST00000547672 SLC17A2O00624 439 aa11.81□□□□□ -0.52
PTCH1-215ENST00000547672 ALX3O95076 343 aa11.81□□□□□ -0.52
PTCH1-215ENST00000547672 UBL3O95164 117 aa11.81□□□□□ -0.52
PTCH1-215ENST00000547672 MAS1P04201 325 aa11.81□□□□□ -0.52
PTCH1-215ENST00000547672 HOXB1P14653 301 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-215ENST00000547672 GABRA1P14867 456 aa11.81□□□□□ -0.52
PTCH1-215ENST00000547672 IGFBP3P17936 291 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-215ENST00000547672 RAB3AP20336 220 aa11.81□□□□□ -0.52
PTCH1-215ENST00000547672 CCL1P22362 96 aa11.81□□□□□ -0.52
PTCH1-215ENST00000547672 BDKRB2P30411 391 aa11.81□□□□□ -0.52
PTCH1-215ENST00000547672 DDOSTP39656 456 aa11.81□□□□□ -0.52
PTCH1-215ENST00000547672 SLC6A9P48067 706 aa11.81□□□□□ -0.52
PTCH1-215ENST00000547672 PLP2Q04941 152 aa11.81□□□□□ -0.52
PTCH1-215ENST00000547672 EIF2S3LQ2VIR3 472 aaKnown RBP11.81□□□□□ -0.52
PTCH1-215ENST00000547672 CCDC92Q53HC0 331 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-215ENST00000547672 TSPO2Q5TGU0 170 aa11.81□□□□□ -0.52
PTCH1-215ENST00000547672 OTPQ5XKR4 325 aa11.81□□□□□ -0.52
PTCH1-215ENST00000547672 BTLAQ7Z6A9 289 aa11.81□□□□□ -0.52
PTCH1-215ENST00000547672 OR6M1Q8NGM8 313 aa11.81□□□□□ -0.52
PTCH1-215ENST00000547672 FGGYQ96C11 551 aa11.81□□□□□ -0.52
PTCH1-215ENST00000547672 FBXO17Q96EF6 278 aa11.81□□□□□ -0.52
PTCH1-215ENST00000547672 CPNE2Q96FN4 548 aaPredicted RBP11.81□□□□□ -0.52
PTCH1-215ENST00000547672 ZNF799Q96GE5 643 aa11.81□□□□□ -0.52
PTCH1-215ENST00000547672 UQCC2Q9BRT2 126 aa11.81□□□□□ -0.52
PTCH1-215ENST00000547672 SLC25A18Q9H1K4 315 aa11.81□□□□□ -0.52
PTCH1-215ENST00000547672 LIN7BQ9HAP6 207 aa11.81□□□□□ -0.52
PTCH1-215ENST00000547672 PLEKHA1Q9HB21 404 aa11.81□□□□□ -0.52
PTCH1-215ENST00000547672 DIABLOQ9NR28 239 aa11.81□□□□□ -0.52
PTCH1-215ENST00000547672 PLSCR2Q9NRY7 297 aa11.81□□□□□ -0.52
PTCH1-215ENST00000547672 SLC7A10Q9NS82 523 aa11.81□□□□□ -0.52
PTCH1-215ENST00000547672 SPRR3Q9UBC9 169 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms