RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 FAM228AQ86W67 206 aa1.53□□□□□ -2.16
CCDC38-204ENST00000546816 SLC22A9Q8IVM8 553 aa1.53□□□□□ -2.16
CCDC38-204ENST00000546816 ZNF664Q8N3J9 261 aa1.53□□□□□ -2.16
CCDC38-204ENST00000546816 NPWQ8N729 165 aa1.53□□□□□ -2.16
CCDC38-204ENST00000546816 CHST4Q8NCG5 386 aa1.53□□□□□ -2.16
CCDC38-204ENST00000546816 SLC7A13Q8TCU3 470 aa1.53□□□□□ -2.16
CCDC38-204ENST00000546816 ZNF317Q96PQ6 595 aaPredicted RBP1.53□□□□□ -2.16
CCDC38-204ENST00000546816 MICU1Q9BPX6 476 aa1.53□□□□□ -2.16
CCDC38-204ENST00000546816 TM2D3Q9BRN9 247 aa1.53□□□□□ -2.16
CCDC38-204ENST00000546816 ZSCAN16Q9H4T2 348 aaPredicted RBP1.53□□□□□ -2.16
CCDC38-204ENST00000546816 RHBDL2Q9NX52 303 aa1.53□□□□□ -2.16
CCDC38-204ENST00000546816 BTNL10A8MVZ5 291 aa1.52□□□□□ -2.17
CCDC38-204ENST00000546816 TAAR5O14804 337 aa1.52□□□□□ -2.17
CCDC38-204ENST00000546816 GLSO94925 669 aaPredicted RBP1.52□□□□□ -2.17
CCDC38-204ENST00000546816 ASGR1P07306 291 aa1.52□□□□□ -2.17
CCDC38-204ENST00000546816 TNNI1P19237 187 aa1.52□□□□□ -2.17
CCDC38-204ENST00000546816 CHMLP26374 656 aa1.52□□□□□ -2.17
CCDC38-204ENST00000546816 PRLHRP49683 370 aa1.52□□□□□ -2.17
CCDC38-204ENST00000546816 GDI2P50395 445 aaKnown RBP1.52□□□□□ -2.17
CCDC38-204ENST00000546816 RND2P52198 227 aa1.52□□□□□ -2.17
CCDC38-204ENST00000546816 CDKN2DP55273 166 aa1.52□□□□□ -2.17
CCDC38-204ENST00000546816 STXBP1P61764 594 aaKnown RBP1.52□□□□□ -2.17
CCDC38-204ENST00000546816 PPIDQ08752 370 aaKnown RBP1.52□□□□□ -2.17
CCDC38-204ENST00000546816 MAD2L1BPQ15013 274 aaPredicted RBP1.52□□□□□ -2.17
CCDC38-204ENST00000546816 PPP1R7Q15435 360 aa1.52□□□□□ -2.17
CCDC38-204ENST00000546816 ZNF726P1Q15940 193 aa1.52□□□□□ -2.17
CCDC38-204ENST00000546816 SNRNP35Q16560 246 aaKnown RBP1.52□□□□□ -2.17
CCDC38-204ENST00000546816 SOHLH1Q5JUK2 328 aa1.52□□□□□ -2.17
CCDC38-204ENST00000546816 NPSR1Q6W5P4 371 aa1.52□□□□□ -2.17
CCDC38-204ENST00000546816 C16orf47Q6ZP98 133 aaPredicted RBP1.52□□□□□ -2.17
CCDC38-204ENST00000546816 AKR7LQ8NHP1 331 aa1.52□□□□□ -2.17
CCDC38-204ENST00000546816 DUS3LQ96G46 650 aaKnown RBP1.52□□□□□ -2.17
CCDC38-204ENST00000546816 OR5B12Q96R08 314 aa1.52□□□□□ -2.17
CCDC38-204ENST00000546816 RBBP8Q99708 897 aa1.52□□□□□ -2.17
CCDC38-204ENST00000546816 NEUROG2Q9H2A3 272 aa1.52□□□□□ -2.17
CCDC38-204ENST00000546816 SLC38A10Q9HBR0 1119 aa1.52□□□□□ -2.17
CCDC38-204ENST00000546816 HRASLS2Q9NWW9 162 aa1.52□□□□□ -2.17
CCDC38-204ENST00000546816 COL22A1Q8NFW1 1626 aaPredicted RBP1.51□□□□□ -2.17
CCDC38-204ENST00000546816 A6NDN8 102 aa1.51□□□□□ -2.17
CCDC38-204ENST00000546816 PDZK1P1A8MUH7 402 aa1.51□□□□□ -2.17
CCDC38-204ENST00000546816 KRBOX1C9JBD0 128 aa1.51□□□□□ -2.17
CCDC38-204ENST00000546816 MPHOSPH10O00566 681 aaKnown RBP1.51□□□□□ -2.17
CCDC38-204ENST00000546816 PLIN3O60664 434 aa1.51□□□□□ -2.17
CCDC38-204ENST00000546816 FKBP6O75344 327 aa1.51□□□□□ -2.17
CCDC38-204ENST00000546816 AQP8O94778 261 aa1.51□□□□□ -2.17
CCDC38-204ENST00000546816 SNX4O95219 450 aa1.51□□□□□ -2.17
CCDC38-204ENST00000546816 LHBP01229 141 aa1.51□□□□□ -2.17
CCDC38-204ENST00000546816 IGLV3-25P01717 112 aa1.51□□□□□ -2.17
CCDC38-204ENST00000546816 SERPINA5P05154 406 aa1.51□□□□□ -2.17
CCDC38-204ENST00000546816 GLAP06280 429 aa1.51□□□□□ -2.17
CCDC38-204ENST00000546816 PABPC4LP0CB38 370 aaKnown RBP1.51□□□□□ -2.17
CCDC38-204ENST00000546816 PBLDP30039 288 aaPredicted RBP1.51□□□□□ -2.17
CCDC38-204ENST00000546816 IDH2P48735 452 aaKnown RBP1.51□□□□□ -2.17
CCDC38-204ENST00000546816 TMED10P49755 219 aaKnown RBP1.51□□□□□ -2.17
CCDC38-204ENST00000546816 ACLYP53396 1101 aa1.51□□□□□ -2.17
CCDC38-204ENST00000546816 ZNF235Q14590 738 aa1.51□□□□□ -2.17
CCDC38-204ENST00000546816 XKR7Q5GH72 579 aa1.51□□□□□ -2.17
CCDC38-204ENST00000546816 ZYG11AQ6WRX3 759 aa1.51□□□□□ -2.17
CCDC38-204ENST00000546816 TAS2R42Q7RTR8 314 aa1.51□□□□□ -2.17
CCDC38-204ENST00000546816 IQCKQ8N0W5 287 aa1.51□□□□□ -2.17
CCDC38-204ENST00000546816 ZNF680Q8NEM1 530 aa1.51□□□□□ -2.17
CCDC38-204ENST00000546816 OR7G2Q8NG99 324 aa1.51□□□□□ -2.17
CCDC38-204ENST00000546816 OR5M1Q8NGP8 315 aa1.51□□□□□ -2.17
CCDC38-204ENST00000546816 RASD2Q96D21 266 aa1.51□□□□□ -2.17
CCDC38-204ENST00000546816 SAMD10Q9BYL1 202 aa1.51□□□□□ -2.17
CCDC38-204ENST00000546816 MED4Q9NPJ6 270 aa1.51□□□□□ -2.17
CCDC38-204ENST00000546816 TMEM9BQ9NQ34 198 aa1.51□□□□□ -2.17
CCDC38-204ENST00000546816 C21orf62Q9NYP8 219 aa1.51□□□□□ -2.17
CCDC38-204ENST00000546816 PDP1Q9P0J1 537 aaPredicted RBP1.51□□□□□ -2.17
CCDC38-204ENST00000546816 DHCR7Q9UBM7 475 aaKnown RBP1.51□□□□□ -2.17
CCDC38-204ENST00000546816 SIGLEC7Q9Y286 467 aa1.51□□□□□ -2.17
CCDC38-204ENST00000546816 IGHV3-49A0A0A0MS15 119 aa1.5□□□□□ -2.17
CCDC38-204ENST00000546816 HEATR9A2RTY3 570 aa1.5□□□□□ -2.17
CCDC38-204ENST00000546816 TNFRSF11BO00300 401 aa1.5□□□□□ -2.17
CCDC38-204ENST00000546816 NDUFAB1O14561 156 aa1.5□□□□□ -2.17
CCDC38-204ENST00000546816 RAB29O14966 203 aa1.5□□□□□ -2.17
CCDC38-204ENST00000546816 POLR1CO15160 346 aaPredicted RBP1.5□□□□□ -2.17
CCDC38-204ENST00000546816 U2AF2P26368 475 aaKnown RBP eCLIP1.5□□□□□ -2.17
CCDC38-204ENST00000546816 RBM34P42696 430 aaKnown RBP1.5□□□□□ -2.17
CCDC38-204ENST00000546816 PRMT2P55345 433 aa1.5□□□□□ -2.17
CCDC38-204ENST00000546816 IDI1Q13907 227 aa1.5□□□□□ -2.17
CCDC38-204ENST00000546816 KRTAP13-4Q3LI77 160 aa1.5□□□□□ -2.17
CCDC38-204ENST00000546816 GPR107Q5VW38 600 aa1.5□□□□□ -2.17
CCDC38-204ENST00000546816 SLC8B1Q6J4K2 584 aa1.5□□□□□ -2.17
CCDC38-204ENST00000546816 GUSBP11Q6P575 273 aa1.5□□□□□ -2.17
CCDC38-204ENST00000546816 USP50Q70EL3 339 aaPredicted RBP1.5□□□□□ -2.17
CCDC38-204ENST00000546816 CDH26Q8IXH8 852 aa1.5□□□□□ -2.17
CCDC38-204ENST00000546816 ZNF101Q8IZC7 436 aa1.5□□□□□ -2.17
CCDC38-204ENST00000546816 GTPBP8Q8N3Z3 284 aaPredicted RBP1.5□□□□□ -2.17
CCDC38-204ENST00000546816 PRELID2Q8N945 189 aa1.5□□□□□ -2.17
CCDC38-204ENST00000546816 C11orf72Q8NBR9 251 aa1.5□□□□□ -2.17
CCDC38-204ENST00000546816 OR11H7Q8NGC8 314 aa1.5□□□□□ -2.17
CCDC38-204ENST00000546816 OR10AD1Q8NGE0 317 aa1.5□□□□□ -2.17
CCDC38-204ENST00000546816 OR56B2PQ8NGI1 322 aa1.5□□□□□ -2.17
CCDC38-204ENST00000546816 ACMSDQ8TDX5 336 aa1.5□□□□□ -2.17
CCDC38-204ENST00000546816 ELMO1Q92556 727 aa1.5□□□□□ -2.17
CCDC38-204ENST00000546816 KIFAP3Q92845 792 aa1.5□□□□□ -2.17
CCDC38-204ENST00000546816 NUP58Q9BVL2 599 aa1.5□□□□□ -2.17
CCDC38-204ENST00000546816 GGTLC1Q9BX51 225 aa1.5□□□□□ -2.17
CCDC38-204ENST00000546816 ANKRD60Q9BZ19 345 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms