RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 Q6ZTK2 550 aa10.51□□□□□ -0.73
SCAF11-208ENST00000546534 IGFN1Q86VF2 1251 aa10.51□□□□□ -0.73
SCAF11-208ENST00000546534 PCYOX1LQ8NBM8 494 aa10.51□□□□□ -0.73
SCAF11-208ENST00000546534 TMEM239Q8WW34 195 aa10.51□□□□□ -0.73
SCAF11-208ENST00000546534 SEMA6AQ9H2E6 1030 aa10.51□□□□□ -0.73
SCAF11-208ENST00000546534 RASSF4Q9H2L5 321 aa10.51□□□□□ -0.73
SCAF11-208ENST00000546534 MMADHCQ9H3L0 296 aaPredicted RBP10.51□□□□□ -0.73
SCAF11-208ENST00000546534 SMURF1Q9HCE7 757 aa10.51□□□□□ -0.73
SCAF11-208ENST00000546534 CCDC167Q9P0B6 97 aa10.51□□□□□ -0.73
SCAF11-208ENST00000546534 ERVK-18Q9QC07 812 aa10.51□□□□□ -0.73
SCAF11-208ENST00000546534 VPREB3Q9UKI3 123 aa10.51□□□□□ -0.73
SCAF11-208ENST00000546534 HIF3AQ9Y2N7 669 aa10.51□□□□□ -0.73
SCAF11-208ENST00000546534 FAM96BQ9Y3D0 163 aa10.51□□□□□ -0.73
SCAF11-208ENST00000546534 PLXNB1O43157 2135 aa10.51□□□□□ -0.73
SCAF11-208ENST00000546534 LOC100996750A0A140TA64 210 aa10.5□□□□□ -0.73
SCAF11-208ENST00000546534 A0A1B0GWJ7 208 aa10.5□□□□□ -0.73
SCAF11-208ENST00000546534 IQCF6A8MYZ5 107 aa10.5□□□□□ -0.73
SCAF11-208ENST00000546534 J3QW42 95 aa10.5□□□□□ -0.73
SCAF11-208ENST00000546534 FBP2O00757 339 aa10.5□□□□□ -0.73
SCAF11-208ENST00000546534 DBHP09172 617 aa10.5□□□□□ -0.73
SCAF11-208ENST00000546534 LORP23490 312 aaPredicted RBP10.5□□□□□ -0.73
SCAF11-208ENST00000546534 FPR3P25089 353 aa10.5□□□□□ -0.73
SCAF11-208ENST00000546534 TGFBR2P37173 567 aa10.5□□□□□ -0.73
SCAF11-208ENST00000546534 GATA4P43694 442 aa10.5□□□□□ -0.73
SCAF11-208ENST00000546534 CTXN1P60606 82 aa10.5□□□□□ -0.73
SCAF11-208ENST00000546534 MAB21L1Q13394 359 aa10.5□□□□□ -0.73
SCAF11-208ENST00000546534 TNFAIP8L3Q5GJ75 292 aa10.5□□□□□ -0.73
SCAF11-208ENST00000546534 CLEC12AQ5QGZ9 265 aa10.5□□□□□ -0.73
SCAF11-208ENST00000546534 OTPQ5XKR4 325 aa10.5□□□□□ -0.73
SCAF11-208ENST00000546534 EPGNQ6UW88 154 aa10.5□□□□□ -0.73
SCAF11-208ENST00000546534 PATL1Q86TB9 770 aaKnown RBP10.5□□□□□ -0.73
SCAF11-208ENST00000546534 C11orf44Q8N8P7 122 aa10.5□□□□□ -0.73
SCAF11-208ENST00000546534 PNLDC1Q8NA58 520 aaKnown RBP10.5□□□□□ -0.73
SCAF11-208ENST00000546534 LRRC75AQ8NAA5 344 aa10.5□□□□□ -0.73
SCAF11-208ENST00000546534 Q8TCH9 128 aa10.5□□□□□ -0.73
SCAF11-208ENST00000546534 SLC26A7Q8TE54 656 aa10.5□□□□□ -0.73
SCAF11-208ENST00000546534 SGCDQ92629 289 aa10.5□□□□□ -0.73
SCAF11-208ENST00000546534 RASD2Q96D21 266 aa10.5□□□□□ -0.73
SCAF11-208ENST00000546534 KRTAP4-6Q9BYQ5 205 aa10.5□□□□□ -0.73
SCAF11-208ENST00000546534 CENPHQ9H3R5 247 aa10.5□□□□□ -0.73
SCAF11-208ENST00000546534 UFSP2Q9NUQ7 469 aa10.5□□□□□ -0.73
SCAF11-208ENST00000546534 AURKAIP1Q9NWT8 199 aaPredicted RBP10.5□□□□□ -0.73
SCAF11-208ENST00000546534 RIMS3Q9UJD0 308 aa10.5□□□□□ -0.73
SCAF11-208ENST00000546534 BTBD17A6NE02 478 aa10.49□□□□□ -0.73
SCAF11-208ENST00000546534 OR6C6A6NF89 314 aa10.49□□□□□ -0.73
SCAF11-208ENST00000546534 A6NIZ1 184 aa10.49□□□□□ -0.73
SCAF11-208ENST00000546534 ADARB2-AS1A8MUL3 147 aa10.49□□□□□ -0.73
SCAF11-208ENST00000546534 ADAM20O43506 726 aa10.49□□□□□ -0.73
SCAF11-208ENST00000546534 SHOX2O60902 331 aaPredicted RBP10.49□□□□□ -0.73
SCAF11-208ENST00000546534 TNFRSF1BP20333 461 aa10.49□□□□□ -0.73
SCAF11-208ENST00000546534 RGS6P49758 472 aa10.49□□□□□ -0.73
SCAF11-208ENST00000546534 CRYBA2P53672 197 aa10.49□□□□□ -0.73
SCAF11-208ENST00000546534 RAP1BP61224 184 aa10.49□□□□□ -0.73
SCAF11-208ENST00000546534 RAP1AP62834 184 aa10.49□□□□□ -0.73
SCAF11-208ENST00000546534 DBPQ10586 325 aaPredicted RBP10.49□□□□□ -0.73
SCAF11-208ENST00000546534 PIN1Q13526 163 aaPredicted RBP10.49□□□□□ -0.73
SCAF11-208ENST00000546534 SELPLGQ14242 412 aa10.49□□□□□ -0.73
SCAF11-208ENST00000546534 MPPED2Q15777 294 aa10.49□□□□□ -0.73
SCAF11-208ENST00000546534 PRAMEF6Q5VXH4 476 aa10.49□□□□□ -0.73
SCAF11-208ENST00000546534 SFRP4Q6FHJ7 346 aaPredicted RBP10.49□□□□□ -0.73
SCAF11-208ENST00000546534 GALNT4Q8N4A0 578 aa10.49□□□□□ -0.73
SCAF11-208ENST00000546534 CELF2-AS1Q8N7Q2 184 aa10.49□□□□□ -0.73
SCAF11-208ENST00000546534 OR5L1Q8NGL2 311 aa10.49□□□□□ -0.73
SCAF11-208ENST00000546534 OR11L1Q8NGX0 322 aa10.49□□□□□ -0.73
SCAF11-208ENST00000546534 OR1F12Q8NHA8 337 aa10.49□□□□□ -0.73
SCAF11-208ENST00000546534 LRRC8CQ8TDW0 803 aa10.49□□□□□ -0.73
SCAF11-208ENST00000546534 WDR76Q9H967 626 aa10.49□□□□□ -0.73
SCAF11-208ENST00000546534 TMEM100Q9NV29 134 aa10.49□□□□□ -0.73
SCAF11-208ENST00000546534 NECAP2Q9NVZ3 263 aa10.49□□□□□ -0.73
SCAF11-208ENST00000546534 ZNRD1Q9P1U0 126 aa10.49□□□□□ -0.73
SCAF11-208ENST00000546534 FBLN5Q9UBX5 448 aa10.49□□□□□ -0.73
SCAF11-208ENST00000546534 SIGLEC9Q9Y336 463 aa10.49□□□□□ -0.73
SCAF11-208ENST00000546534 MED31Q9Y3C7 131 aa10.49□□□□□ -0.73
SCAF11-208ENST00000546534 USH1CQ9Y6N9 552 aa10.49□□□□□ -0.73
SCAF11-208ENST00000546534 ELOVL7A1L3X0 281 aa10.48□□□□□ -0.73
SCAF11-208ENST00000546534 LGALS8O00214 317 aa10.48□□□□□ -0.73
SCAF11-208ENST00000546534 FCN3O75636 299 aa10.48□□□□□ -0.73
SCAF11-208ENST00000546534 OR5F1O95221 314 aa10.48□□□□□ -0.73
SCAF11-208ENST00000546534 FBP1P09467 338 aa10.48□□□□□ -0.73
SCAF11-208ENST00000546534 GABRA5P31644 462 aa10.48□□□□□ -0.73
SCAF11-208ENST00000546534 RAD23AP54725 363 aa10.48□□□□□ -0.73
SCAF11-208ENST00000546534 MTPNP58546 118 aa10.48□□□□□ -0.73
SCAF11-208ENST00000546534 TAS2R41P59536 307 aa10.48□□□□□ -0.73
SCAF11-208ENST00000546534 AQP6Q13520 282 aa10.48□□□□□ -0.73
SCAF11-208ENST00000546534 AGKQ53H12 422 aa10.48□□□□□ -0.73
SCAF11-208ENST00000546534 CCDC92Q53HC0 331 aaPredicted RBP10.48□□□□□ -0.73
SCAF11-208ENST00000546534 INTS11Q5TA45 600 aaKnown RBP10.48□□□□□ -0.73
SCAF11-208ENST00000546534 LYPD4Q6UWN0 246 aa10.48□□□□□ -0.73
SCAF11-208ENST00000546534 BTN2A1Q7KYR7 527 aa10.48□□□□□ -0.73
SCAF11-208ENST00000546534 VMO1Q7Z5L0 202 aa10.48□□□□□ -0.73
SCAF11-208ENST00000546534 BOLLQ8N9W6 283 aaKnown RBP10.48□□□□□ -0.73
SCAF11-208ENST00000546534 ERGIC1Q969X5 290 aa10.48□□□□□ -0.73
SCAF11-208ENST00000546534 APOBEC3DQ96AK3 386 aaPredicted RBP10.48□□□□□ -0.73
SCAF11-208ENST00000546534 BPIFA2Q96DR5 249 aa10.48□□□□□ -0.73
SCAF11-208ENST00000546534 DMRTB1Q96MA1 342 aa10.48□□□□□ -0.73
SCAF11-208ENST00000546534 ECSITQ9BQ95 431 aa10.48□□□□□ -0.73
SCAF11-208ENST00000546534 PPA2Q9H2U2 334 aa10.48□□□□□ -0.73
SCAF11-208ENST00000546534 TOR3AQ9H497 397 aa10.48□□□□□ -0.73
SCAF11-208ENST00000546534 RNF7Q9UBF6 113 aa10.48□□□□□ -0.73
SCAF11-208ENST00000546534 FOXJ3Q9UPW0 622 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms