RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 NKX6-2Q9C056 277 aaPredicted RBP11.35□□□□□ -0.59
COL4A6-209ENST00000545689 PLK3Q9H4B4 646 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 SLCO1C1Q9NYB5 712 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 RNF4P78317 190 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 KCNRGQ8N5I3 272 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 RNF170Q96K19 258 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 SIGLEC7Q9Y286 467 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 F6UZH7 168 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 PLPP2O43688 288 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 OR8U8P0C7N1 319 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 HLA-DOBP13765 273 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 M6PRP20645 277 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 TGM1P22735 817 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 VWA2Q5GFL6 755 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 LAIR1Q6GTX8 287 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 C8orf82Q6P1X6 216 aaPredicted RBP11.35□□□□□ -0.59
COL4A6-209ENST00000545689 GCNT2Q8N0V5 402 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 ZFP82Q8N141 532 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 ZNF485Q8NCK3 441 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 OR8B4Q96RC9 309 aa11.35□□□□□ -0.59
COL4A6-209ENST00000545689 CCDC163A0A0D9SF12 145 aa11.34□□□□□ -0.59
COL4A6-209ENST00000545689 E5RGE8 158 aa11.34□□□□□ -0.59
COL4A6-209ENST00000545689 LINC01387J3KSC0 135 aa11.34□□□□□ -0.59
COL4A6-209ENST00000545689 HSPB6O14558 160 aa11.34□□□□□ -0.59
COL4A6-209ENST00000545689 ZGLP1P0C6A0 271 aa11.34□□□□□ -0.59
COL4A6-209ENST00000545689 ZNF573Q86YE8 665 aa11.34□□□□□ -0.59
COL4A6-209ENST00000545689 CDH26Q8IXH8 852 aa11.34□□□□□ -0.59
COL4A6-209ENST00000545689 ZADH2Q8N4Q0 377 aa11.34□□□□□ -0.59
COL4A6-209ENST00000545689 OR51F2Q8NH61 342 aa11.34□□□□□ -0.59
COL4A6-209ENST00000545689 OTOSQ8NHW6 89 aa11.34□□□□□ -0.59
COL4A6-209ENST00000545689 BOD1Q96IK1 185 aa11.34□□□□□ -0.59
COL4A6-209ENST00000545689 NSG2Q9Y328 171 aa11.34□□□□□ -0.59
COL4A6-209ENST00000545689 PMS2P1A4D2B8 440 aa11.34□□□□□ -0.59
COL4A6-209ENST00000545689 OR5H14A6NHG9 310 aa11.34□□□□□ -0.59
COL4A6-209ENST00000545689 OIP5O43482 229 aa11.34□□□□□ -0.59
COL4A6-209ENST00000545689 SLC2A1P11166 492 aa11.34□□□□□ -0.59
COL4A6-209ENST00000545689 LINC00696Q6ZRV3 163 aa11.34□□□□□ -0.59
COL4A6-209ENST00000545689 OR2W3Q7Z3T1 314 aa11.34□□□□□ -0.59
COL4A6-209ENST00000545689 OR2G3Q8NGZ4 309 aa11.34□□□□□ -0.59
COL4A6-209ENST00000545689 OCEL1Q9H607 264 aa11.34□□□□□ -0.59
COL4A6-209ENST00000545689 ZNF629Q9UEG4 869 aaPredicted RBP11.34□□□□□ -0.59
COL4A6-209ENST00000545689 FOCADQ5VW36 1801 aa11.34□□□□□ -0.59
COL4A6-209ENST00000545689 TMEM235A6NFC5 223 aa11.34□□□□□ -0.59
COL4A6-209ENST00000545689 LMO7DNF2Z398 122 aa11.34□□□□□ -0.59
COL4A6-209ENST00000545689 ADRB1P08588 477 aa11.34□□□□□ -0.59
COL4A6-209ENST00000545689 MAGEB1P43366 347 aa11.34□□□□□ -0.59
COL4A6-209ENST00000545689 PCBP3P57721 371 aaKnown RBP11.34□□□□□ -0.59
COL4A6-209ENST00000545689 TDHQ8IZJ6 230 aa11.34□□□□□ -0.59
COL4A6-209ENST00000545689 SLC35G3Q8N808 338 aa11.34□□□□□ -0.59
COL4A6-209ENST00000545689 HSD17B11Q8NBQ5 300 aa11.34□□□□□ -0.59
COL4A6-209ENST00000545689 C2orf50Q96LR7 162 aa11.34□□□□□ -0.59
COL4A6-209ENST00000545689 RHNO1Q9BSD3 238 aa11.34□□□□□ -0.59
COL4A6-209ENST00000545689 SLCO1B1Q9Y6L6 691 aa11.34□□□□□ -0.59
COL4A6-209ENST00000545689 ARPC3O15145 178 aa11.34□□□□□ -0.59
COL4A6-209ENST00000545689 TGOLN2O43493 480 aa11.34□□□□□ -0.59
COL4A6-209ENST00000545689 NRASP01111 189 aa11.34□□□□□ -0.59
COL4A6-209ENST00000545689 ELFN2Q5R3F8 820 aa11.34□□□□□ -0.59
COL4A6-209ENST00000545689 SPEM1Q8N4L4 309 aa11.34□□□□□ -0.59
COL4A6-209ENST00000545689 C15orf54Q8N8G6 183 aa11.34□□□□□ -0.59
COL4A6-209ENST00000545689 OR1N1Q8NGS0 311 aa11.34□□□□□ -0.59
COL4A6-209ENST00000545689 SERPINE3A8MV23 424 aa11.34□□□□□ -0.59
COL4A6-209ENST00000545689 CCSO14618 274 aa11.34□□□□□ -0.59
COL4A6-209ENST00000545689 CRYBB2P43320 205 aa11.34□□□□□ -0.59
COL4A6-209ENST00000545689 UBALD2Q8IYN6 164 aa11.34□□□□□ -0.59
COL4A6-209ENST00000545689 UBE2ZQ9H832 354 aaPredicted RBP11.34□□□□□ -0.59
COL4A6-209ENST00000545689 CTSFQ9UBX1 484 aa11.34□□□□□ -0.59
COL4A6-209ENST00000545689 METTL12A8MUP2 240 aa11.33□□□□□ -0.6
COL4A6-209ENST00000545689 SH2D1BO14796 132 aa11.33□□□□□ -0.6
COL4A6-209ENST00000545689 TXNL1O43396 289 aa11.33□□□□□ -0.6
COL4A6-209ENST00000545689 MT-ND4LP03901 98 aa11.33□□□□□ -0.6
COL4A6-209ENST00000545689 ERVMER34-1Q9H9K5 563 aa11.33□□□□□ -0.6
COL4A6-209ENST00000545689 PURGQ9UJV8 347 aaKnown RBP11.33□□□□□ -0.6
COL4A6-209ENST00000545689 GDF2Q9UK05 429 aaPredicted RBP11.33□□□□□ -0.6
COL4A6-209ENST00000545689 PCMT1P22061 227 aa11.33□□□□□ -0.6
COL4A6-209ENST00000545689 C1orf53Q5VUE5 145 aa11.33□□□□□ -0.6
COL4A6-209ENST00000545689 REEP6Q96HR9 211 aa11.33□□□□□ -0.6
COL4A6-209ENST00000545689 CD3DP04234 171 aa11.33□□□□□ -0.6
COL4A6-209ENST00000545689 HTRA4P83105 476 aaPredicted RBP11.33□□□□□ -0.6
COL4A6-209ENST00000545689 OR52W1Q6IF63 320 aa11.33□□□□□ -0.6
COL4A6-209ENST00000545689 ST7LQ8TDW4 575 aa11.33□□□□□ -0.6
COL4A6-209ENST00000545689 COX14Q96I36 57 aa11.33□□□□□ -0.6
COL4A6-209ENST00000545689 FLVCR1Q9Y5Y0 555 aa11.33□□□□□ -0.6
COL4A6-209ENST00000545689 STRCP1A6NGW2 1772 aa11.33□□□□□ -0.6
COL4A6-209ENST00000545689 CT45A6P0DMU7 189 aa11.33□□□□□ -0.6
COL4A6-209ENST00000545689 CT45A5P0DMU8 189 aa11.33□□□□□ -0.6
COL4A6-209ENST00000545689 CT45A7P0DMV0 189 aa11.33□□□□□ -0.6
COL4A6-209ENST00000545689 CT45A8P0DMV1 189 aa11.33□□□□□ -0.6
COL4A6-209ENST00000545689 CT45A9P0DMV2 189 aa11.33□□□□□ -0.6
COL4A6-209ENST00000545689 GPNMBQ14956 572 aa11.33□□□□□ -0.6
COL4A6-209ENST00000545689 CT45A2Q5DJT8 189 aa11.33□□□□□ -0.6
COL4A6-209ENST00000545689 CT45A1Q5HYN5 189 aa11.33□□□□□ -0.6
COL4A6-209ENST00000545689 ZNF793Q6ZN11 406 aa11.33□□□□□ -0.6
COL4A6-209ENST00000545689 OR5M1Q8NGP8 315 aa11.33□□□□□ -0.6
COL4A6-209ENST00000545689 CT45A3Q8NHU0 189 aa11.33□□□□□ -0.6
COL4A6-209ENST00000545689 APH1BQ8WW43 257 aa11.33□□□□□ -0.6
COL4A6-209ENST00000545689 PP6455Q8WZ26 134 aa11.33□□□□□ -0.6
COL4A6-209ENST00000545689 KCNE3Q9Y6H6 103 aa11.33□□□□□ -0.6
COL4A6-209ENST00000545689 ZNF732B4DXR9 585 aa11.33□□□□□ -0.6
COL4A6-209ENST00000545689 CHRNB4P30926 498 aa11.33□□□□□ -0.6
COL4A6-209ENST00000545689 KIR2DL3P43628 341 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms