RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, human

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-223	ENST00000545440	EIF3K	Q9UBQ5	218 aa	Known RBP	6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	FZR1	Q9UM11	496 aa		6.55	□□□□□ -1.36
SNHG1-223	ENST00000545440	ARHGAP32	A7KAX9	2087 aa		6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	SOCS2	O14508	198 aa		6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	IMPA2	O14732	288 aa		6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	ARPC3	O15145	178 aa		6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	OR10H3	O60404	316 aa		6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	DOK2	O60496	412 aa		6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	LMX1B	O60663	402 aa		6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	KHDRBS3	O75525	346 aa	Known RBP	6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	RP2	O75695	350 aa		6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	NCR1	O76036	304 aa		6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	TOX4	O94842	621 aa		6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	CLPTM1	O96005	669 aa		6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	FAM157C	P0CG43	387 aa		6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	ATP6V1B2	P21281	511 aa		6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	CCNO	P22674	350 aa		6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	CALB2	P22676	271 aa		6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	TUBG1	P23258	451 aa		6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	IGFBP5	P24593	272 aa		6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	RRM2	P31350	389 aa		6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	SLC6A6	P31641	620 aa		6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	MSX2	P35548	267 aa	Predicted RBP	6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	IFNGR2	P38484	337 aa		6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	MAGEA2	P43356	314 aa		6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	LSM6	P62312	80 aa	Known RBP	6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	ZNF124	Q15973	351 aa		6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	ZNF718	Q3SXZ3	478 aa		6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	LCN8	Q6JVE9	175 aa		6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	RPL13AP3	Q6NVV1	102 aa		6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	ZNF774	Q6NX45	483 aa		6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	TMEM154	Q6P9G4	183 aa		6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	DNM1P34	Q6PK57	102 aa		6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	ARL9	Q6T311	187 aa		6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	UGT2A3	Q6UWM9	527 aa		6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	ZNF620	Q6ZNG0	422 aa		6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	ZER1	Q7Z7L7	766 aa		6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	FITM2	Q8N6M3	262 aa		6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	CCDC197	Q8NCU1	140 aa		6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	NPEPL1	Q8NDH3	523 aa		6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	ICA1L	Q8NDH6	482 aa		6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	OR14K1	Q8NGZ2	314 aa		6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	IPCEF1	Q8WWN9	437 aa	Predicted RBP	6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	POP5	Q969H6	163 aa	Known RBP	6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	MSI2	Q96DH6	328 aa	Known RBP	6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	MARS2	Q96GW9	593 aa	Known RBP	6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	GPA33	Q99795	319 aa		6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	OR52D1	Q9H346	318 aa		6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	MAGIX	Q9H6Y5	334 aa		6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	ELOVL3	Q9HB03	270 aa		6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	HINT3	Q9NQE9	182 aa	Known RBP	6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	TUBG2	Q9NRH3	451 aa		6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	CYSLTR2	Q9NS75	346 aa		6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	TAAR3P	Q9P1P4	343 aa		6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	ATPIF1	Q9UII2	106 aa		6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	KCNS2	Q9ULS6	477 aa		6.54	□□□□□ -1.36
SNHG1-223	ENST00000545440	PLSCR5	A0PG75	271 aa		6.53	□□□□□ -1.36
SNHG1-223	ENST00000545440	LRP5L	A4QPB2	252 aa		6.53	□□□□□ -1.36
SNHG1-223	ENST00000545440	OR6C6	A6NF89	314 aa		6.53	□□□□□ -1.36
SNHG1-223	ENST00000545440	SLC16A6	O15403	523 aa		6.53	□□□□□ -1.36
SNHG1-223	ENST00000545440	SGCE	O43556	437 aa		6.53	□□□□□ -1.36
SNHG1-223	ENST00000545440	SLC16A7	O60669	478 aa		6.53	□□□□□ -1.36
SNHG1-223	ENST00000545440	KRT36	O76013	467 aa		6.53	□□□□□ -1.36
SNHG1-223	ENST00000545440	PPP1R3D	O95685	299 aa		6.53	□□□□□ -1.36
SNHG1-223	ENST00000545440	ABHD16A	O95870	558 aa		6.53	□□□□□ -1.36
SNHG1-223	ENST00000545440	IFNA2	P01563	188 aa		6.53	□□□□□ -1.36
SNHG1-223	ENST00000545440	ADH4	P08319	380 aa		6.53	□□□□□ -1.36
SNHG1-223	ENST00000545440	HNF1A	P20823	631 aa		6.53	□□□□□ -1.36
SNHG1-223	ENST00000545440	GSTM3	P21266	225 aa		6.53	□□□□□ -1.36
SNHG1-223	ENST00000545440	CRABP1	P29762	137 aa		6.53	□□□□□ -1.36
SNHG1-223	ENST00000545440	GCH1	P30793	250 aa		6.53	□□□□□ -1.36
SNHG1-223	ENST00000545440	LIPA	P38571	399 aa		6.53	□□□□□ -1.36
SNHG1-223	ENST00000545440	MAGEB1	P43366	347 aa		6.53	□□□□□ -1.36
SNHG1-223	ENST00000545440	GPR6	P46095	362 aa	Predicted RBP	6.53	□□□□□ -1.36
SNHG1-223	ENST00000545440	HTR5A	P47898	357 aa		6.53	□□□□□ -1.36
SNHG1-223	ENST00000545440	GSS	P48637	474 aa		6.53	□□□□□ -1.36
SNHG1-223	ENST00000545440	ARHGDIA	P52565	204 aa		6.53	□□□□□ -1.36
SNHG1-223	ENST00000545440	CDH15	P55291	814 aa		6.53	□□□□□ -1.36
SNHG1-223	ENST00000545440	TMEM33	P57088	247 aa		6.53	□□□□□ -1.36
SNHG1-223	ENST00000545440	PPP1CB	P62140	327 aa		6.53	□□□□□ -1.36
SNHG1-223	ENST00000545440	GLO1	Q04760	184 aa		6.53	□□□□□ -1.36
SNHG1-223	ENST00000545440	TRIP10	Q15642	601 aa		6.53	□□□□□ -1.36
SNHG1-223	ENST00000545440	RFX4	Q33E94	735 aa		6.53	□□□□□ -1.36
SNHG1-223	ENST00000545440	C1orf94	Q6P1W5	598 aa		6.53	□□□□□ -1.36
SNHG1-223	ENST00000545440	PTCHD4	Q6ZW05	846 aa		6.53	□□□□□ -1.36
SNHG1-223	ENST00000545440	ZDHHC21	Q8IVQ6	265 aa		6.53	□□□□□ -1.36
SNHG1-223	ENST00000545440	BCL6B	Q8N143	479 aa	Predicted RBP	6.53	□□□□□ -1.36
SNHG1-223	ENST00000545440	PQLC1	Q8N2U9	271 aa		6.53	□□□□□ -1.36
SNHG1-223	ENST00000545440	LINC00471	Q8N535	108 aa		6.53	□□□□□ -1.36
SNHG1-223	ENST00000545440	SLC25A40	Q8TBP6	338 aa		6.53	□□□□□ -1.36
SNHG1-223	ENST00000545440	KLF14	Q8TD94	323 aa	Predicted RBP	6.53	□□□□□ -1.36
SNHG1-223	ENST00000545440	YIPF5	Q969M3	257 aa		6.53	□□□□□ -1.36
SNHG1-223	ENST00000545440	C4orf45	Q96LM5	186 aa		6.53	□□□□□ -1.36
SNHG1-223	ENST00000545440	COG8	Q96MW5	612 aa		6.53	□□□□□ -1.36
SNHG1-223	ENST00000545440	OR2J1	Q9GZK6	312 aa		6.53	□□□□□ -1.36
SNHG1-223	ENST00000545440	NUAK2	Q9H093	628 aa		6.53	□□□□□ -1.36
SNHG1-223	ENST00000545440	SHARPIN	Q9H0F6	387 aa		6.53	□□□□□ -1.36
SNHG1-223	ENST00000545440	RACGAP1	Q9H0H5	632 aa		6.53	□□□□□ -1.36
SNHG1-223	ENST00000545440	SAP30L	Q9HAJ7	183 aa		6.53	□□□□□ -1.36
SNHG1-223	ENST00000545440	ZNF275	Q9NSD4	429 aa	Predicted RBP	6.53	□□□□□ -1.36

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